RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 CCDC144NLQ6NUI1 221 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 ZNF788Q6ZQV5 615 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 C5orf17Q8NAS9 161 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 RAB24Q969Q5 203 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 GHITMQ9H3K2 345 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 SMOC1Q9H4F8 434 aa10.06□□□□□ -0.8
SYNE2-208ENST00000553289 A0A0J9YW62 118 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 H0Y980 276 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 SCGB1C2P0DMR2 95 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 PSG2P11465 335 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 HOXA6P31267 233 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 RPL30P62888 115 aaKnown RBP10.05□□□□□ -0.8
SYNE2-208ENST00000553289 INSIG2Q9Y5U4 225 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 MEX3AA1L020 520 aaKnown RBP10.05□□□□□ -0.8
SYNE2-208ENST00000553289 DHRS7CA6NNS2 312 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 M0R2Z0 102 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 MPDU1O75352 247 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 HIST1H1EP10412 219 aaKnown RBP10.05□□□□□ -0.8
SYNE2-208ENST00000553289 ATP6V0CP27449 155 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 G6PCP35575 357 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 FSCN3Q9NQT6 498 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 COA4Q9NYJ1 87 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 RCC2Q9P258 522 aaKnown RBP10.05□□□□□ -0.8
SYNE2-208ENST00000553289 LY75O60449 1722 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 HELTA6NFD8 242 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 ARG1P05089 322 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 P2RY6Q15077 328 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 KCNK17Q96T54 332 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 WIPI2Q9Y4P8 454 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 NUP214P35658 2090 aaPredicted RBP10.05□□□□□ -0.8
SYNE2-208ENST00000553289 ARFGEF1Q9Y6D6 1849 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 TRAV20A0A0B4J274 112 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 MGST3O14880 152 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 RAB29O14966 203 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 GREM1O60565 184 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 PTBP3O95758 552 aaKnown RBP10.05□□□□□ -0.8
SYNE2-208ENST00000553289 HLA-DQB1P01920 261 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 HOXB1P14653 301 aaPredicted RBP10.05□□□□□ -0.8
SYNE2-208ENST00000553289 SLC25A47Q6Q0C1 308 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 OR4X1Q8NH49 305 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 ZNF596Q8TC21 504 aa10.05□□□□□ -0.8
SYNE2-208ENST00000553289 IGHV1-45A0A0A0MS14 117 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 ISLRO14498 428 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 PAGE4O60829 102 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 SMPD2O60906 423 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 COL8A1P27658 744 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 MNX1P50219 401 aaPredicted RBP10.04□□□□□ -0.8
SYNE2-208ENST00000553289 FUT5Q11128 374 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 SFTPA2Q8IWL1 248 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 GCSAMQ8N6F7 178 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 OR1L6Q8NGR2 347 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 MRPL30Q8TCC3 161 aaKnown RBP10.04□□□□□ -0.8
SYNE2-208ENST00000553289 PITPNC1Q9UKF7 332 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 SHANK3Q9BYB0 1731 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 SRSF10O75494 262 aaKnown RBP10.04□□□□□ -0.8
SYNE2-208ENST00000553289 SULT1A2P50226 295 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 PSG4Q00888 419 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 SSMEM1Q8WWF3 244 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 IL22RA2Q969J5 263 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 LOXL4Q96JB6 756 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 DDA1Q9BW61 102 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 LPAR5Q9H1C0 372 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 M0QZK8 103 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 GGCTO75223 188 aaKnown RBP10.04□□□□□ -0.8
SYNE2-208ENST00000553289 AGFG2O95081 481 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 FAM157CP0CG43 387 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 FGF5P12034 268 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 TRBV5-7A0A0A0MS05 114 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 IGLV1-36A0A0B4J1U3 117 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 SEMA7AO75326 666 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 UPK3AO75631 287 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 IGHV3-13P01766 116 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 IGHV3-7P01780 117 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 TMEM255AQ5JRV8 349 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 ASCL3Q9NQ33 180 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 KCNK7Q9Y2U2 307 aa10.04□□□□□ -0.8
SYNE2-208ENST00000553289 J3QR06 171 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 SFTPCP11686 197 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 UCNP55089 124 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 PACRGQ96M98 296 aaPredicted RBP10.03□□□□□ -0.8
SYNE2-208ENST00000553289 MAP1LC3CQ9BXW4 147 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 GCM2O75603 506 aaPredicted RBP10.03□□□□□ -0.8
SYNE2-208ENST00000553289 DAOP14920 347 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 PRDX2P32119 198 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 CSRP3P50461 194 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 IFITM3Q01628 133 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 HIST3H3Q16695 136 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 FDX2Q6P4F2 183 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 CBLN2Q8IUK8 224 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 SLC22A18ASQ8N1D0 253 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 GPR132Q9UNW8 380 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 PLXNB2O15031 1838 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 SMIM10L1P0DMW3 83 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 VSIG10L2P0DP72 767 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 RPL29P47914 159 aaKnown RBP10.03□□□□□ -0.8
SYNE2-208ENST00000553289 OVCH2Q7RTZ1 564 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 TMEM116Q8NCL8 245 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 DPF1Q92782 380 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 SMIM10Q96HG1 83 aa10.03□□□□□ -0.8
SYNE2-208ENST00000553289 KCNMB2Q9Y691 235 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms