RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 PRB2P02812 416 aaPredicted RBP12.65□□□□□ -0.38
CDK4-215ENST00000553237 FAM90A15PP0C7V4 464 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 FAM90A13PP0C7W8 464 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 FAM90A14PP0C7W9 464 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 FAM90A24PP0C7X0 464 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 IGHV3-43DP0DP04 118 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 CPEP16870 476 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 RPS25P62851 125 aaKnown RBP12.65□□□□□ -0.38
CDK4-215ENST00000553237 CD83Q01151 205 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 C10orf99Q6UWK7 81 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 ZNF497Q6ZNH5 498 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 SLC16A12Q6ZSM3 486 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 LYPD6Q86Y78 171 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 THNSL2Q86YJ6 484 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 OR4F17Q8NGA8 305 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 OR4F4Q96R69 305 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 ACOT13Q9NPJ3 140 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 PEX16Q9Y5Y5 336 aa12.65□□□□□ -0.38
CDK4-215ENST00000553237 AIPO00170 330 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 SDCBPO00560 298 aaPredicted RBP12.64□□□□□ -0.39
CDK4-215ENST00000553237 UCHL1P09936 223 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 REG1BP48304 166 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 RAB7AP51149 207 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 GABARAPL2P60520 117 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 BEAN1Q3B7T3 259 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 HSD17B12Q53GQ0 312 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 OXLD1Q5BKU9 147 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 TCTEX1D4Q5JR98 221 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 SAMD5Q5TGI4 173 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 TMEM91Q6ZNR0 172 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 ZNF367Q7RTV3 350 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 LRRTM1Q86UE6 522 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 NKAIN3Q8N8D7 197 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 TMEM104Q8NE00 496 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 OR4K15Q8NH41 348 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 PHYHIPQ92561 330 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 MRPS24Q96EL2 167 aaKnown RBP12.64□□□□□ -0.39
CDK4-215ENST00000553237 CYYR1Q96J86 154 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 UQCC2Q9BRT2 126 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 SELENOIQ9C0D9 397 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 ETAA1Q9NY74 926 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 MOB4Q9Y3A3 225 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 PLXNB1O43157 2135 aa12.64□□□□□ -0.39
CDK4-215ENST00000553237 IGHV3-72A0A0B4J1Y9 119 aa12.63□□□□□ -0.39
CDK4-215ENST00000553237 TCRBV4S1A1TA0A5B7 111 aa12.63□□□□□ -0.39
CDK4-215ENST00000553237 M0QZK8 103 aa12.63□□□□□ -0.39
CDK4-215ENST00000553237 MRPS14O60783 128 aaKnown RBP12.63□□□□□ -0.39
CDK4-215ENST00000553237 CRTAPO75718 401 aaPredicted RBP12.63□□□□□ -0.39
CDK4-215ENST00000553237 MGMTP16455 207 aa12.63□□□□□ -0.39
CDK4-215ENST00000553237 TMEM11P17152 192 aa12.63□□□□□ -0.39
CDK4-215ENST00000553237 SRMP19623 302 aa12.63□□□□□ -0.39
CDK4-215ENST00000553237 PSMA1P25786 263 aaKnown RBP12.63□□□□□ -0.39
CDK4-215ENST00000553237 TRAM1Q15629 374 aa12.63□□□□□ -0.39
CDK4-215ENST00000553237 SYT6Q5T7P8 510 aaPredicted RBP12.63□□□□□ -0.39
CDK4-215ENST00000553237 RAB12Q6IQ22 244 aa12.63□□□□□ -0.39
CDK4-215ENST00000553237 MOB3BQ86TA1 216 aa12.63□□□□□ -0.39
CDK4-215ENST00000553237 OR8H3Q8N146 312 aa12.63□□□□□ -0.39
CDK4-215ENST00000553237 YTHDF1Q9BYJ9 559 aaKnown RBP12.63□□□□□ -0.39
CDK4-215ENST00000553237 SPACA1Q9HBV2 294 aa12.63□□□□□ -0.39
CDK4-215ENST00000553237 GFOD1Q9NXC2 390 aa12.63□□□□□ -0.39
CDK4-215ENST00000553237 RCC2Q9P258 522 aaKnown RBP12.63□□□□□ -0.39
CDK4-215ENST00000553237 TRAPPC2LQ9UL33 140 aa12.63□□□□□ -0.39
CDK4-215ENST00000553237 UBE2QL1A1L167 161 aa12.62□□□□□ -0.39
CDK4-215ENST00000553237 C12orf77C9JDV5 145 aa12.62□□□□□ -0.39
CDK4-215ENST00000553237 CCRL2O00421 344 aa12.62□□□□□ -0.39
CDK4-215ENST00000553237 HSD17B6O14756 317 aa12.62□□□□□ -0.39
CDK4-215ENST00000553237 ORC5O43913 435 aa12.62□□□□□ -0.39
CDK4-215ENST00000553237 IGKV1D-33P01593 117 aa12.62□□□□□ -0.39
CDK4-215ENST00000553237 IGKV1-33P01594 117 aa12.62□□□□□ -0.39
CDK4-215ENST00000553237 GAPDHP04406 335 aaKnown RBP12.62□□□□□ -0.39
CDK4-215ENST00000553237 LOXL3P58215 753 aa12.62□□□□□ -0.39
CDK4-215ENST00000553237 GLT8D1Q68CQ7 371 aa12.62□□□□□ -0.39
CDK4-215ENST00000553237 PRR18Q8N4B5 295 aa12.62□□□□□ -0.39
CDK4-215ENST00000553237 SVOPQ8N4V2 548 aa12.62□□□□□ -0.39
CDK4-215ENST00000553237 OR52M1Q8NGK5 317 aa12.62□□□□□ -0.39
CDK4-215ENST00000553237 FAM46BQ96A09 425 aa12.62□□□□□ -0.39
CDK4-215ENST00000553237 IGHV1-3A0A0C4DH29 117 aa12.61□□□□□ -0.39
CDK4-215ENST00000553237 SLC31A2O15432 143 aa12.61□□□□□ -0.39
CDK4-215ENST00000553237 PF4V1P10720 104 aa12.61□□□□□ -0.39
CDK4-215ENST00000553237 FABP5Q01469 135 aa12.61□□□□□ -0.39
CDK4-215ENST00000553237 ZNF816Q0VGE8 651 aaPredicted RBP12.61□□□□□ -0.39
CDK4-215ENST00000553237 SSX1Q16384 188 aa12.61□□□□□ -0.39
CDK4-215ENST00000553237 KHDC1LQ5JSQ8 128 aa12.61□□□□□ -0.39
CDK4-215ENST00000553237 SIGIRRQ6IA17 410 aa12.61□□□□□ -0.39
CDK4-215ENST00000553237 SPARTQ8N0X7 666 aa12.61□□□□□ -0.39
CDK4-215ENST00000553237 C5orf56Q8N8D9 126 aa12.61□□□□□ -0.39
CDK4-215ENST00000553237 OR4X2Q8NGF9 303 aa12.61□□□□□ -0.39
CDK4-215ENST00000553237 OR10V1Q8NGI7 309 aa12.61□□□□□ -0.39
CDK4-215ENST00000553237 OR1L1Q8NH94 360 aa12.61□□□□□ -0.39
CDK4-215ENST00000553237 Q96M66 194 aa12.61□□□□□ -0.39
CDK4-215ENST00000553237 GNG12Q9UBI6 72 aa12.61□□□□□ -0.39
CDK4-215ENST00000553237 LRRC42Q9Y546 428 aa12.61□□□□□ -0.39
CDK4-215ENST00000553237 TSSC4Q9Y5U2 329 aaPredicted RBP12.61□□□□□ -0.39
CDK4-215ENST00000553237 PRKDCP78527 4128 aaKnown RBP12.61□□□□□ -0.39
CDK4-215ENST00000553237 SPINT2O43291 252 aa12.6□□□□□ -0.39
CDK4-215ENST00000553237 ARL6IP5O75915 188 aa12.6□□□□□ -0.39
CDK4-215ENST00000553237 HBZP02008 142 aa12.6□□□□□ -0.39
CDK4-215ENST00000553237 RCC1P18754 421 aaPredicted RBP12.6□□□□□ -0.39
CDK4-215ENST00000553237 FUT3P21217 361 aa12.6□□□□□ -0.39
CDK4-215ENST00000553237 C1orf100Q5SVJ3 147 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms