RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 TMPRSS11AQ6ZMR5 421 aa9□□□□□ -0.97
NEK3-204ENST00000552973 C5orf24Q7Z6I8 188 aa9□□□□□ -0.97
NEK3-204ENST00000552973 IZUMO1Q8IYV9 350 aa9□□□□□ -0.97
NEK3-204ENST00000552973 LINC00311Q8N616 119 aa9□□□□□ -0.97
NEK3-204ENST00000552973 OR52M1Q8NGK5 317 aa9□□□□□ -0.97
NEK3-204ENST00000552973 OR1L1Q8NH94 360 aa9□□□□□ -0.97
NEK3-204ENST00000552973 GHSRQ92847 366 aa9□□□□□ -0.97
NEK3-204ENST00000552973 MUL1Q969V5 352 aa9□□□□□ -0.97
NEK3-204ENST00000552973 ST6GALNAC6Q969X2 333 aa9□□□□□ -0.97
NEK3-204ENST00000552973 WWC2-AS2Q96NR7 200 aa9□□□□□ -0.97
NEK3-204ENST00000552973 PRR25Q96S07 402 aa9□□□□□ -0.97
NEK3-204ENST00000552973 S1PR3Q99500 378 aa9□□□□□ -0.97
NEK3-204ENST00000552973 HSPB9Q9BQS6 159 aa9□□□□□ -0.97
NEK3-204ENST00000552973 S100A14Q9HCY8 104 aa9□□□□□ -0.97
NEK3-204ENST00000552973 LIN7CQ9NUP9 197 aaKnown RBP9□□□□□ -0.97
NEK3-204ENST00000552973 BABAM2Q9NXR7 383 aa9□□□□□ -0.97
NEK3-204ENST00000552973 GNG12Q9UBI6 72 aa9□□□□□ -0.97
NEK3-204ENST00000552973 DNAH3Q8TD57 4116 aa9□□□□□ -0.97
NEK3-204ENST00000552973 DNAH9Q9NYC9 4486 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 TRAV8-7A0A075B6U6 113 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 C12orf77C9JDV5 145 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 MCRIP1C9JLW8 97 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 OGG1O15527 345 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 ORC5O43913 435 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 BAG2O95816 211 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 IGFBP3P17936 291 aaPredicted RBP8.99□□□□□ -0.97
NEK3-204ENST00000552973 DCKP27707 260 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 CD1BP29016 333 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 SLC6A1P30531 599 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 VHLP40337 213 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 CT45A1Q5HYN5 189 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 GLIPR1L1Q6UWM5 242 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 ZNF497Q6ZNH5 498 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 LINC00596Q86U02 117 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 STX19Q8N4C7 294 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 JAGN1Q8N5M9 183 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 TMEM104Q8NE00 496 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 ZNF555Q8NEP9 628 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 CT45A3Q8NHU0 189 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 SMIM19Q96E16 107 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 GON7Q9BXV9 100 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 BANF2Q9H503 90 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 PAK1IP1Q9NWT1 392 aaPredicted RBP8.99□□□□□ -0.97
NEK3-204ENST00000552973 ETAA1Q9NY74 926 aa8.99□□□□□ -0.97
NEK3-204ENST00000552973 TRBV5-5A0A0J9YX44 114 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 PNMA8CA0A1B0GUJ8 204 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 UBE2QL1A1L167 161 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 SPINT2O43291 252 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 ZNF780AO75290 641 aaPredicted RBP8.98□□□□□ -0.97
NEK3-204ENST00000552973 HBZP02008 142 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 MAS1P04201 325 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 ELANEP08246 267 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 SLC2A2P11168 524 aaPredicted RBP8.98□□□□□ -0.97
NEK3-204ENST00000552973 RCC1P18754 421 aaPredicted RBP8.98□□□□□ -0.97
NEK3-204ENST00000552973 MYL12AP19105 171 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 VDAC1P21796 283 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 MYF6P23409 242 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 SOX6P35712 828 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 ECI1P42126 302 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 CDX1P47902 265 aaPredicted RBP8.98□□□□□ -0.97
NEK3-204ENST00000552973 ADARB1P78563 741 aaKnown RBP8.98□□□□□ -0.97
NEK3-204ENST00000552973 KIR2DS1Q14954 304 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 RAB12Q6IQ22 244 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 SLC25A48Q6ZT89 311 aaKnown RBP8.98□□□□□ -0.97
NEK3-204ENST00000552973 PQLC1Q8N2U9 271 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 ZNF439Q8NDP4 499 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 OR5M8Q8NGP6 311 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 OR8U1Q8NH10 309 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 KCTD7Q96MP8 289 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 ASCL2Q99929 193 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 MRPS28Q9Y2Q9 187 aaKnown RBP8.98□□□□□ -0.97
NEK3-204ENST00000552973 PEX16Q9Y5Y5 336 aa8.98□□□□□ -0.97
NEK3-204ENST00000552973 SEC14L6B5MCN3 397 aa8.97□□□□□ -0.97
NEK3-204ENST00000552973 RRP9O43818 475 aaKnown RBP8.97□□□□□ -0.97
NEK3-204ENST00000552973 RAMP3O60896 148 aa8.97□□□□□ -0.97
NEK3-204ENST00000552973 RPS11P62280 158 aaKnown RBP eCLIP8.97□□□□□ -0.97
NEK3-204ENST00000552973 CFHR3Q02985 330 aa8.97□□□□□ -0.97
NEK3-204ENST00000552973 FOXE3Q13461 319 aa8.97□□□□□ -0.97
NEK3-204ENST00000552973 GPR176Q14439 515 aa8.97□□□□□ -0.97
NEK3-204ENST00000552973 Q499Y3 187 aa8.97□□□□□ -0.97
NEK3-204ENST00000552973 C9orf66Q5T8R8 295 aa8.97□□□□□ -0.97
NEK3-204ENST00000552973 DMKNQ6E0U4 476 aaPredicted RBP8.97□□□□□ -0.97
NEK3-204ENST00000552973 AWAT2Q6E213 333 aa8.97□□□□□ -0.97
NEK3-204ENST00000552973 C8orf31Q8N9H6 132 aa8.97□□□□□ -0.97
NEK3-204ENST00000552973 OR11H1Q8NG94 326 aa8.97□□□□□ -0.97
NEK3-204ENST00000552973 OR52L2PQ8NGH6 319 aa8.97□□□□□ -0.97
NEK3-204ENST00000552973 RITA1Q96K30 269 aa8.97□□□□□ -0.97
NEK3-204ENST00000552973 OR5B12Q96R08 314 aa8.97□□□□□ -0.97
NEK3-204ENST00000552973 OR14A2Q96R54 314 aa8.97□□□□□ -0.97
NEK3-204ENST00000552973 SELENOIQ9C0D9 397 aa8.97□□□□□ -0.97
NEK3-204ENST00000552973 SMPD3Q9NY59 655 aaPredicted RBP8.97□□□□□ -0.97
NEK3-204ENST00000552973 RCC2Q9P258 522 aaKnown RBP8.97□□□□□ -0.97
NEK3-204ENST00000552973 CKLFQ9UBR5 152 aa8.97□□□□□ -0.97
NEK3-204ENST00000552973 ZMAT5Q9UDW3 170 aaKnown RBP8.97□□□□□ -0.97
NEK3-204ENST00000552973 ZNF107Q9UII5 783 aaPredicted RBP8.97□□□□□ -0.97
NEK3-204ENST00000552973 DIMT1Q9UNQ2 313 aaKnown RBP8.97□□□□□ -0.97
NEK3-204ENST00000552973 EXOSC1Q9Y3B2 195 aaKnown RBP8.97□□□□□ -0.97
NEK3-204ENST00000552973 LSM4Q9Y4Z0 139 aaKnown RBP8.97□□□□□ -0.97
NEK3-204ENST00000552973 WSB1Q9Y6I7 421 aa8.97□□□□□ -0.97
NEK3-204ENST00000552973 KMT2CQ8NEZ4 4911 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms