RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 IDNKQ5T6J7 187 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 NPSR1Q6W5P4 371 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 COX15Q7KZN9 410 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 SETD3Q86TU7 594 aaPredicted RBP3.67□□□□□ -1.82
CPSF6-206ENST00000550987 UNC93AQ86WB7 457 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 PRSS58Q8IYP2 241 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 FAM71AQ8IYT1 594 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 Q8N9W7 124 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 CHST4Q8NCG5 386 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 OR8K1Q8NGG5 319 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 OR52E2Q8NGJ4 325 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 OR10Z1Q8NGY1 313 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 OR6K2Q8NGY2 324 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 OR10J6PQ8NGY7 276 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 OR51F2Q8NH61 342 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 OR5AK3PQ8NH89 298 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 TCP10LQ8TDR4 215 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 OR8D1Q8WZ84 308 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 TMEM159Q96B96 161 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 CREB3L1Q96BA8 519 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 CMTM5Q96DZ9 223 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 SLC25A2Q9BXI2 301 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 SLC17A9Q9BYT1 436 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 NAA50Q9GZZ1 169 aaKnown RBP3.67□□□□□ -1.82
CPSF6-206ENST00000550987 DAZ3Q9NR90 486 aaKnown RBP3.67□□□□□ -1.82
CPSF6-206ENST00000550987 CD84Q9UIB8 345 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 ERGIC3Q9Y282 383 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 TSSC4Q9Y5U2 329 aaPredicted RBP3.67□□□□□ -1.82
CPSF6-206ENST00000550987 WIF1Q9Y5W5 379 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 KCNE3Q9Y6H6 103 aa3.67□□□□□ -1.82
CPSF6-206ENST00000550987 MDC1Q14676 2089 aaKnown RBP3.67□□□□□ -1.82
CPSF6-206ENST00000550987 PIKFYVEQ9Y2I7 2098 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 MYCBP2O75592 4640 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 SYCE1LA8MT33 242 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 SLC19A2O60779 497 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 MPDU1O75352 247 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 IFNA5P01569 189 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 IGLV3-27P01718 113 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 TCP1P17987 556 aaKnown RBP3.66□□□□□ -1.82
CPSF6-206ENST00000550987 IVDP26440 423 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 G0S2P27469 103 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 ARR3P36575 388 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 RANBP1P43487 201 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 XKP51811 444 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 HERVK_113P61574 105 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 CKAP4Q07065 602 aaKnown RBP3.66□□□□□ -1.82
CPSF6-206ENST00000550987 PSG7Q13046 419 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 DYNC1I2Q13409 638 aaKnown RBP3.66□□□□□ -1.82
CPSF6-206ENST00000550987 TFDP2Q14188 446 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 GINS1Q14691 196 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 C16orf72Q14CZ0 275 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 ZCWPW2Q504Y3 356 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 TEX30Q5JUR7 227 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 HES5Q5TA89 166 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 OGFRL1Q5TC84 451 aaPredicted RBP3.66□□□□□ -1.82
CPSF6-206ENST00000550987 LPCAT4Q643R3 524 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 LRRN1Q6UXK5 716 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 CCDC121Q6ZUS5 278 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 CYP4Z2PQ8N1L4 340 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 Q8N402 240 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 ACTL9Q8TC94 416 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 AP3S1Q92572 193 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 SLC35E1Q96K37 410 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 PPP1R36Q96LQ0 422 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 KLF6Q99612 283 aaPredicted RBP3.66□□□□□ -1.82
CPSF6-206ENST00000550987 EBNA1BP2Q99848 306 aaKnown RBP3.66□□□□□ -1.82
CPSF6-206ENST00000550987 ULBP1Q9BZM6 244 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 C1orf198Q9H425 327 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 WDR55Q9H6Y2 383 aaPredicted RBP3.66□□□□□ -1.82
CPSF6-206ENST00000550987 DIABLOQ9NR28 239 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 PLEKHJ1Q9NW61 149 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 MED29Q9NX70 200 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 BABAM2Q9NXR7 383 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 NXT1Q9UKK6 140 aaKnown RBP3.66□□□□□ -1.82
CPSF6-206ENST00000550987 TP53TG3Q9ULZ0 132 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 V9GYY9 64 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 FAT2Q9NYQ8 4349 aa3.66□□□□□ -1.82
CPSF6-206ENST00000550987 A0A1W2PQL4 384 aaPredicted RBP3.65□□□□□ -1.83
CPSF6-206ENST00000550987 FAM166BA8MTA8 275 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 TMEM238C9JI98 176 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 KPNA3O00505 521 aaPredicted RBP3.65□□□□□ -1.83
CPSF6-206ENST00000550987 NME4O00746 187 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 TRAF3IP2O43734 574 aaPredicted RBP3.65□□□□□ -1.83
CPSF6-206ENST00000550987 CA11O75493 328 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 BRI3O95415 125 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 HPRT1P00492 218 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 THRAP10827 490 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 ZNF19P17023 458 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 SERPINB1P30740 379 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 SLCO1A2P46721 670 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 WNT4P56705 351 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 PFN3P60673 137 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 ERVS71-1P61550 626 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 C2orf54Q08AI8 447 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 INCA1Q0VD86 236 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 FLOT2Q14254 428 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 SMCO1Q147U7 214 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 ELOCQ15369 112 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 TNXAQ16473 311 aa3.65□□□□□ -1.83
CPSF6-206ENST00000550987 RPEL1Q2QD12 228 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms