RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 MMP23AO75900 390 aa17.51■□□□□ 0.39
NEK3-202ENST00000550841 HBZP02008 142 aa17.51■□□□□ 0.39
NEK3-202ENST00000550841 EIF4EP06730 217 aaKnown RBP17.51■□□□□ 0.39
NEK3-202ENST00000550841 ELK1P19419 428 aa17.51■□□□□ 0.39
NEK3-202ENST00000550841 DTYMKP23919 212 aa17.51■□□□□ 0.39
NEK3-202ENST00000550841 NFYBP25208 207 aa17.51■□□□□ 0.39
NEK3-202ENST00000550841 PRRX1P54821 245 aa17.51■□□□□ 0.39
NEK3-202ENST00000550841 LGALS4P56470 323 aa17.51■□□□□ 0.39
NEK3-202ENST00000550841 SRSF7Q16629 238 aaKnown RBP eCLIP17.51■□□□□ 0.39
NEK3-202ENST00000550841 MIDNQ504T8 468 aa17.51■□□□□ 0.39
NEK3-202ENST00000550841 C9orf139Q6ZV77 190 aa17.51■□□□□ 0.39
NEK3-202ENST00000550841 PDZD9Q8IXQ8 264 aa17.51■□□□□ 0.39
NEK3-202ENST00000550841 ABHD12Q8N2K0 398 aa17.51■□□□□ 0.39
NEK3-202ENST00000550841 OR11H6Q8NGC7 330 aa17.51■□□□□ 0.39
NEK3-202ENST00000550841 MCFD2Q8NI22 146 aa17.51■□□□□ 0.39
NEK3-202ENST00000550841 GALMQ96C23 342 aa17.51■□□□□ 0.39
NEK3-202ENST00000550841 SUCNR1Q9BXA5 334 aa17.51■□□□□ 0.39
NEK3-202ENST00000550841 CLEC7AQ9BXN2 247 aa17.51■□□□□ 0.39
NEK3-202ENST00000550841 AUNIPQ9H7T9 357 aa17.51■□□□□ 0.39
NEK3-202ENST00000550841 BATF3Q9NR55 127 aa17.51■□□□□ 0.39
NEK3-202ENST00000550841 A0A087X0M5 115 aa17.5■□□□□ 0.39
NEK3-202ENST00000550841 A0A1B0GX30 115 aa17.5■□□□□ 0.39
NEK3-202ENST00000550841 TMEM235A6NFC5 223 aa17.5■□□□□ 0.39
NEK3-202ENST00000550841 NPFFO15130 113 aa17.5■□□□□ 0.39
NEK3-202ENST00000550841 TPPPO94811 219 aa17.5■□□□□ 0.39
NEK3-202ENST00000550841 COX7A1P24310 79 aa17.5■□□□□ 0.39
NEK3-202ENST00000550841 CD34P28906 385 aa17.5■□□□□ 0.39
NEK3-202ENST00000550841 DLX1P56177 255 aa17.5■□□□□ 0.39
NEK3-202ENST00000550841 KLRD1Q13241 179 aa17.5■□□□□ 0.39
NEK3-202ENST00000550841 HMGN3Q15651 99 aa17.5■□□□□ 0.39
NEK3-202ENST00000550841 HCP5Q6MZN7 132 aa17.5■□□□□ 0.39
NEK3-202ENST00000550841 PRR18Q8N4B5 295 aa17.5■□□□□ 0.39
NEK3-202ENST00000550841 C15orf40Q8WUR7 153 aa17.5■□□□□ 0.39
NEK3-202ENST00000550841 CYYR1Q96J86 154 aa17.5■□□□□ 0.39
NEK3-202ENST00000550841 DCUN1D5Q9BTE7 237 aa17.5■□□□□ 0.39
NEK3-202ENST00000550841 C6orf62Q9GZU0 229 aaPredicted RBP17.5■□□□□ 0.39
NEK3-202ENST00000550841 ZNF69Q9UC07 566 aa17.5■□□□□ 0.39
NEK3-202ENST00000550841 A3GALT2U3KPV4 340 aa17.5■□□□□ 0.39
NEK3-202ENST00000550841 IGHV2-26A0A0B4J1V2 119 aa17.49■□□□□ 0.39
NEK3-202ENST00000550841 TRDCB7Z8K6 153 aa17.49■□□□□ 0.39
NEK3-202ENST00000550841 SDCBPO00560 298 aaPredicted RBP17.49■□□□□ 0.39
NEK3-202ENST00000550841 CTDSP2O14595 271 aa17.49■□□□□ 0.39
NEK3-202ENST00000550841 TOR1AO14656 332 aa17.49■□□□□ 0.39
NEK3-202ENST00000550841 FCGR3AP08637 254 aa17.49■□□□□ 0.39
NEK3-202ENST00000550841 KIR2DS4P43632 304 aa17.49■□□□□ 0.39
NEK3-202ENST00000550841 TAS2R20P59543 309 aa17.49■□□□□ 0.39
NEK3-202ENST00000550841 HTD2P86397 168 aa17.49■□□□□ 0.39
NEK3-202ENST00000550841 PRB3Q04118 309 aaPredicted RBP17.49■□□□□ 0.39
NEK3-202ENST00000550841 KIR2DS1Q14954 304 aa17.49■□□□□ 0.39
NEK3-202ENST00000550841 LTC4SQ16873 150 aa17.49■□□□□ 0.39
NEK3-202ENST00000550841 Q3ZCU0 254 aa17.49■□□□□ 0.39
NEK3-202ENST00000550841 BRD3OSQ6XYD6 125 aa17.49■□□□□ 0.39
NEK3-202ENST00000550841 OR1L1Q8NH94 360 aa17.49■□□□□ 0.39
NEK3-202ENST00000550841 SPATA3Q8NHX4 192 aa17.49■□□□□ 0.39
NEK3-202ENST00000550841 ZNF596Q8TC21 504 aa17.49■□□□□ 0.39
NEK3-202ENST00000550841 NXF2Q9GZY0 626 aaKnown RBP17.49■□□□□ 0.39
NEK3-202ENST00000550841 MMP27Q9H306 513 aa17.49■□□□□ 0.39
NEK3-202ENST00000550841 NSD1Q96L73 2696 aaPredicted RBP17.49■□□□□ 0.39
NEK3-202ENST00000550841 ARG1P05089 322 aa17.48■□□□□ 0.39
NEK3-202ENST00000550841 GDNFP39905 211 aa17.48■□□□□ 0.39
NEK3-202ENST00000550841 CBX5P45973 191 aa17.48■□□□□ 0.39
NEK3-202ENST00000550841 HLA-DRB3P79483 266 aa17.48■□□□□ 0.39
NEK3-202ENST00000550841 STEAP3Q658P3 488 aa17.48■□□□□ 0.39
NEK3-202ENST00000550841 Q6ZS49 121 aa17.48■□□□□ 0.39
NEK3-202ENST00000550841 IZUMO1Q8IYV9 350 aa17.48■□□□□ 0.39
NEK3-202ENST00000550841 OR9G1Q8NH87 305 aa17.48■□□□□ 0.39
NEK3-202ENST00000550841 CREB3L1Q96BA8 519 aa17.48■□□□□ 0.39
NEK3-202ENST00000550841 OR2S2Q9NQN1 319 aa17.48■□□□□ 0.39
NEK3-202ENST00000550841 GFOD1Q9NXC2 390 aa17.48■□□□□ 0.39
NEK3-202ENST00000550841 GNG12Q9UBI6 72 aa17.48■□□□□ 0.39
NEK3-202ENST00000550841 RABL2AQ9UBK7 228 aaPredicted RBP17.48■□□□□ 0.39
NEK3-202ENST00000550841 EXTL2Q9UBQ6 330 aa17.48■□□□□ 0.39
NEK3-202ENST00000550841 RABL2BQ9UNT1 228 aa17.48■□□□□ 0.39
NEK3-202ENST00000550841 MRPS7Q9Y2R9 242 aaKnown RBP17.48■□□□□ 0.39
NEK3-202ENST00000550841 FAM96BQ9Y3D0 163 aa17.48■□□□□ 0.39
NEK3-202ENST00000550841 A6NHS1 94 aa17.47■□□□□ 0.39
NEK3-202ENST00000550841 RGS11O94810 467 aa17.47■□□□□ 0.39
NEK3-202ENST00000550841 IFNA2P01563 188 aa17.47■□□□□ 0.39
NEK3-202ENST00000550841 PRSS3P35030 304 aa17.47■□□□□ 0.39
NEK3-202ENST00000550841 LOXL3P58215 753 aa17.47■□□□□ 0.39
NEK3-202ENST00000550841 ZNF626Q68DY1 528 aa17.47■□□□□ 0.39
NEK3-202ENST00000550841 BAIAP2L2Q6UXY1 529 aa17.47■□□□□ 0.39
NEK3-202ENST00000550841 ST6GALNAC5Q9BVH7 336 aa17.47■□□□□ 0.39
NEK3-202ENST00000550841 ZNF286AQ9HBT8 521 aa17.47■□□□□ 0.39
NEK3-202ENST00000550841 JPT1Q9UK76 154 aa17.47■□□□□ 0.39
NEK3-202ENST00000550841 ELF5Q9UKW6 265 aaPredicted RBP17.47■□□□□ 0.39
NEK3-202ENST00000550841 TBL2Q9Y4P3 447 aaKnown RBP17.47■□□□□ 0.39
NEK3-202ENST00000550841 A0A1W2PRD5 423 aa17.46■□□□□ 0.39
NEK3-202ENST00000550841 A0A1W2PRF3 423 aa17.46■□□□□ 0.39
NEK3-202ENST00000550841 A0A1W2PRM7 423 aa17.46■□□□□ 0.39
NEK3-202ENST00000550841 MEIOCA2RUB1 952 aa17.46■□□□□ 0.39
NEK3-202ENST00000550841 MINOS1Q5TGZ0 78 aa17.46■□□□□ 0.39
NEK3-202ENST00000550841 RUSC1-AS1Q66K80 236 aa17.46■□□□□ 0.39
NEK3-202ENST00000550841 RBMS3Q6XE24 437 aaKnown RBP17.46■□□□□ 0.39
NEK3-202ENST00000550841 PIP4P2Q8N4L2 257 aa17.46■□□□□ 0.39
NEK3-202ENST00000550841 DTX3Q8N9I9 347 aa17.46■□□□□ 0.39
NEK3-202ENST00000550841 BEND2Q8NDZ0 799 aa17.46■□□□□ 0.39
NEK3-202ENST00000550841 OR4A4PQ8NGN8 299 aa17.46■□□□□ 0.39
NEK3-202ENST00000550841 UBALD1Q8TB05 177 aa17.46■□□□□ 0.39
NEK3-202ENST00000550841 NUDCD2Q8WVJ2 157 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms