RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 SLC25A46Q96AG3 418 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 RCN3Q96D15 328 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 TEAD3Q99594 435 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 DOK1Q99704 481 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 BCL7BQ9BQE9 202 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 OR2AG1Q9H205 316 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 TREX1Q9NSU2 369 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 HMGXB4Q9UGU5 601 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 ATPIF1Q9UII2 106 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 NOSIPQ9Y314 301 aaKnown RBP2.8□□□□□ -1.96
LIMA1-205ENST00000550592 ATP6V1DQ9Y5K8 247 aa2.8□□□□□ -1.96
LIMA1-205ENST00000550592 YLPM1P49750 1951 aaKnown RBP2.8□□□□□ -1.96
LIMA1-205ENST00000550592 NUP210LQ5VU65 1888 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 ZNF407Q9C0G0 2248 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 IGKV1-27A0A075B6S5 117 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 A0A0D9SEW6 157 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 IGHV7-4-1A0A0J9YVY3 117 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 COLCA2A8K830 154 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 NDUFC2-KCTD14E9PQ53 114 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 CTNSO60931 367 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 IGHV3-11P01762 117 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 CATP04040 527 aaKnown RBP2.79□□□□□ -1.96
LIMA1-205ENST00000550592 SERPINA7P05543 415 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 IDO1P14902 403 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 LOXP28300 417 aaPredicted RBP2.79□□□□□ -1.96
LIMA1-205ENST00000550592 TEAD1P28347 426 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 SRP14P37108 136 aaKnown RBP2.79□□□□□ -1.96
LIMA1-205ENST00000550592 BCAP31P51572 246 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 LCN2P80188 198 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 BASP1P80723 227 aaKnown RBP2.79□□□□□ -1.96
LIMA1-205ENST00000550592 CYP24A1Q07973 514 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 PPIDQ08752 370 aaKnown RBP2.79□□□□□ -1.96
LIMA1-205ENST00000550592 ADIGQ0VDE8 80 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 ZNF880Q6PDB4 577 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 ULK3Q6PHR2 472 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 RTL4Q6ZR62 310 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 NDUFAF7Q7L592 441 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 LINC00523Q86TU6 105 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 RNF10Q8N5U6 811 aaKnown RBP2.79□□□□□ -1.96
LIMA1-205ENST00000550592 TRAM1L1Q8N609 369 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 TRIML2Q8N7C3 387 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 OR11G2Q8NGC1 345 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 OR5T3Q8NGG3 340 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 ASZ1Q8WWH4 475 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 PSMF1Q92530 271 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 CDKL2Q92772 493 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 SCGB3A2Q96PL1 93 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 ALS2CR12Q96Q35 445 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 REEP1Q9H902 201 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 DHCR7Q9UBM7 475 aaKnown RBP2.79□□□□□ -1.96
LIMA1-205ENST00000550592 ZNF257Q9Y2Q1 563 aa2.79□□□□□ -1.96
LIMA1-205ENST00000550592 HERC2O95714 4834 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 EML6Q6ZMW3 1958 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 TRAV40A0A0B4J280 105 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 C7orf66A4D0T2 115 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 OR5H1A6NKK0 313 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 H3BN98 237 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 EIF1BO60739 113 aaKnown RBP2.78□□□□□ -1.96
LIMA1-205ENST00000550592 ZMPSTE24O75844 475 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 PAHP00439 452 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 PMCHP20382 165 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 S100A1P23297 94 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 ME2P23368 584 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 PCK1P35558 622 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 GGT2P36268 569 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 EIF1P41567 113 aaKnown RBP2.78□□□□□ -1.96
LIMA1-205ENST00000550592 PPP1CAP62136 330 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 CTAG1AP78358 180 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 INCA1Q0VD86 236 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 TSC22D1Q15714 1073 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 CCDC153Q494R4 210 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 NKAIN1Q4KMZ8 207 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 SLC25A25Q6KCM7 469 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 CCDC121Q6ZUS5 278 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 VTCN1Q7Z7D3 282 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 ZNF321PQ8N8H1 164 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 ZNF709Q8N972 641 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 TTLQ8NG68 377 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 OR4M1Q8NGD0 313 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 OR1J4Q8NGS1 313 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 RXFP2Q8WXD0 754 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 DEDD2Q8WXF8 326 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 C8orf76Q96K31 380 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 C18orf15Q96N68 181 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 TBL1YQ9BQ87 522 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 RHOXF2Q9BQY4 288 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 UTP23Q9BRU9 249 aaKnown RBP2.78□□□□□ -1.96
LIMA1-205ENST00000550592 TIMM29Q9BSF4 260 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 RSPO3Q9BXY4 272 aaPredicted RBP2.78□□□□□ -1.96
LIMA1-205ENST00000550592 CENPHQ9H3R5 247 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 WDR54Q9H977 334 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 FKBP14Q9NWM8 211 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 EMC3Q9P0I2 261 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 ENOPH1Q9UHY7 261 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 NXT1Q9UKK6 140 aaKnown RBP2.78□□□□□ -1.96
LIMA1-205ENST00000550592 GMEB1Q9Y692 573 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 TENM2Q9NT68 2774 aa2.78□□□□□ -1.96
LIMA1-205ENST00000550592 CENPVL3A0A0U1RRI6 287 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 ZNF850A8MQ14 1090 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 C3orf84H3BNL1 204 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms