RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 CXorf67Q86X51 503 aaPredicted RBP13.81□□□□□ -0.2
RBFOX1-212ENST00000550418 TMEM56Q96MV1 263 aa13.81□□□□□ -0.2
RBFOX1-212ENST00000550418 HSD17B10Q99714 261 aaKnown RBP13.81□□□□□ -0.2
RBFOX1-212ENST00000550418 P4HTMQ9NXG6 502 aa13.81□□□□□ -0.2
RBFOX1-212ENST00000550418 TRGV10A0A0A0MS01 117 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 A6NDN8 102 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 CRYM-AS1A6NIL9 109 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 ISG15P05161 165 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 CYB5R2Q6BCY4 276 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 VASH2Q86V25 355 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 POC1AQ8NBT0 407 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 ZNF519Q8TB69 540 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 UQCR10Q9UDW1 63 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 RNF222A6NCQ9 220 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 MSGN1A6NI15 193 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 PSG2P11465 335 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 NR2C2APQ86WQ0 139 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 KLF13Q9Y2Y9 288 aaPredicted RBP13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 SRSF10O75494 262 aaKnown RBP13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 DXOO77932 396 aaKnown RBP13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 GABRG2P18507 467 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 PEBP1P30086 187 aaKnown RBP13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 HINT1P49773 126 aaPredicted RBP13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 RBPJQ06330 500 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 LINC01590Q5TEZ4 76 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 SH3BGRL3Q9H299 93 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 MPC1Q9Y5U8 109 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 ZNF708P17019 499 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 EIF3IQ13347 325 aaKnown RBP13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 TMEM222Q9H0R3 208 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 MYOFQ9NZM1 2061 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 PARP14Q460N5 1801 aa13.8□□□□□ -0.2
RBFOX1-212ENST00000550418 IGHV3-43A0A0B4J1X8 118 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 APCSP02743 223 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 IGHV3-43DP0DP04 118 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 ANKRD37Q7Z713 158 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 WDFY1Q8IWB7 410 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 OR10AD1Q8NGE0 317 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 CXorf1O96002 111 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 ERGP11308 486 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 TMEM97Q5BJF2 176 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 CXorf66Q5JRM2 361 aaPredicted RBP13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 Q6ZS52 159 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 R3HDM4Q96D70 268 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 SCN4AP35499 1836 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 RPL36A-HNRNPH2H7BZ11 118 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 ST8SIA5O15466 376 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 NGFRP08138 427 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 HOXA5P20719 270 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 OPRK1P41145 380 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 MESP2Q0VG99 397 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 FOXC1Q12948 553 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 BPIFA4PQ86YQ2 179 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 MRGPRDQ8TDS7 321 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 GMPPAQ96IJ6 420 aaPredicted RBP13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 ABHD14BQ96IU4 210 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 HEXA-AS1Q9H8Q6 139 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 KLF4O43474 513 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 EML2O95834 649 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 MT-ND6P03923 174 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 SCGB1C2P0DMR2 95 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 BCL3P20749 454 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 SPATA45Q537H7 98 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 OR4A47Q6IF82 309 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 C6orf15Q6UXA7 325 aaPredicted RBP13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 TMEM183AQ8IXX5 376 aa13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 PARD6GQ9BYG4 376 aaPredicted RBP13.79□□□□□ -0.2
RBFOX1-212ENST00000550418 LINC01387J3KSC0 135 aa13.78□□□□□ -0.2
RBFOX1-212ENST00000550418 CCL2P13500 99 aa13.78□□□□□ -0.2
RBFOX1-212ENST00000550418 F2RP25116 425 aa13.78□□□□□ -0.2
RBFOX1-212ENST00000550418 LYG1Q8N1E2 194 aa13.78□□□□□ -0.2
RBFOX1-212ENST00000550418 OR1L4Q8NGR5 311 aa13.78□□□□□ -0.2
RBFOX1-212ENST00000550418 TRAV14DV4A0A0A6YYC5 116 aa13.78□□□□□ -0.2
RBFOX1-212ENST00000550418 LMX1BO60663 402 aa13.78□□□□□ -0.2
RBFOX1-212ENST00000550418 TEX30Q5JUR7 227 aa13.78□□□□□ -0.2
RBFOX1-212ENST00000550418 PMS2P1A4D2B8 440 aa13.78□□□□□ -0.2
RBFOX1-212ENST00000550418 OR2J3O76001 311 aa13.78□□□□□ -0.2
RBFOX1-212ENST00000550418 NDUFB4O95168 129 aa13.78□□□□□ -0.2
RBFOX1-212ENST00000550418 FNDC7Q5VTL7 733 aa13.78□□□□□ -0.2
RBFOX1-212ENST00000550418 LRRC75AQ8NAA5 344 aa13.78□□□□□ -0.2
RBFOX1-212ENST00000550418 BLNKQ8WV28 456 aa13.78□□□□□ -0.2
RBFOX1-212ENST00000550418 SCN10AQ9Y5Y9 1956 aa13.78□□□□□ -0.2
RBFOX1-212ENST00000550418 M0R296 226 aa13.78□□□□□ -0.2
RBFOX1-212ENST00000550418 MYF5P13349 255 aa13.78□□□□□ -0.2
RBFOX1-212ENST00000550418 PIKFYVEQ9Y2I7 2098 aa13.78□□□□□ -0.2
RBFOX1-212ENST00000550418 IGLV1-36A0A0B4J1U3 117 aa13.77□□□□□ -0.2
RBFOX1-212ENST00000550418 LGALS4P56470 323 aa13.77□□□□□ -0.2
RBFOX1-212ENST00000550418 LEMD1Q68G75 181 aa13.77□□□□□ -0.2
RBFOX1-212ENST00000550418 OR4A4PQ8NGN8 299 aa13.77□□□□□ -0.2
RBFOX1-212ENST00000550418 TMEM230Q96A57 120 aa13.77□□□□□ -0.2
RBFOX1-212ENST00000550418 PCED1AQ9H1Q7 454 aa13.77□□□□□ -0.2
RBFOX1-212ENST00000550418 ADRA2AP08913 450 aa13.77□□□□□ -0.21
RBFOX1-212ENST00000550418 HIKESHIQ53FT3 197 aa13.77□□□□□ -0.21
RBFOX1-212ENST00000550418 D2HGDHQ8N465 521 aa13.77□□□□□ -0.21
RBFOX1-212ENST00000550418 RNF2Q99496 336 aa13.77□□□□□ -0.21
RBFOX1-212ENST00000550418 TWSG1Q9GZX9 223 aa13.77□□□□□ -0.21
RBFOX1-212ENST00000550418 TUBA4BQ9H853 241 aa13.77□□□□□ -0.21
RBFOX1-212ENST00000550418 CISD1Q9NZ45 108 aaKnown RBP13.77□□□□□ -0.21
RBFOX1-212ENST00000550418 R4GN57 208 aa13.77□□□□□ -0.21
RBFOX1-212ENST00000550418 IFITM10A6NMD0 228 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms