RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 OR2K2Q8NGT1 345 aa4□□□□□ -1.77
SCAF11-212ENST00000549162 SMIM8Q96KF7 97 aa4□□□□□ -1.77
SCAF11-212ENST00000549162 PSMG3Q9BT73 122 aaPredicted RBP4□□□□□ -1.77
SCAF11-212ENST00000549162 C19orf24Q9BVV8 132 aa4□□□□□ -1.77
SCAF11-212ENST00000549162 MED20Q9H944 212 aa4□□□□□ -1.77
SCAF11-212ENST00000549162 NECAP2Q9NVZ3 263 aa4□□□□□ -1.77
SCAF11-212ENST00000549162 RNF7Q9UBF6 113 aa4□□□□□ -1.77
SCAF11-212ENST00000549162 TMED3Q9Y3Q3 217 aa4□□□□□ -1.77
SCAF11-212ENST00000549162 N6AMT1Q9Y5N5 214 aa4□□□□□ -1.77
SCAF11-212ENST00000549162 GOLGB1Q14789 3259 aaKnown RBP3.99□□□□□ -1.77
SCAF11-212ENST00000549162 KBTBD11-OT1A0A1B0GTJ5 212 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 F10P00742 488 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 IGLV2-23P01705 113 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 IGF1P05019 195 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 FBP1P09467 338 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 CXCL2P19875 107 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 DUTP33316 252 aaKnown RBP3.99□□□□□ -1.77
SCAF11-212ENST00000549162 FHITP49789 147 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 ST3GAL2Q16842 350 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 LIPKQ5VXJ0 399 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 LYPD4Q6UWN0 246 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 C16orf47Q6ZP98 133 aaPredicted RBP3.99□□□□□ -1.77
SCAF11-212ENST00000549162 LYG2Q86SG7 212 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 VASH2Q86V25 355 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 APRG1Q8IVJ8 170 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 BPIFB2Q8N4F0 458 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 OR52N4Q8NGI2 321 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 FCAMRQ8WWV6 532 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 TMEM186Q96B77 213 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 TSC22D3Q99576 134 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 TMEM14BQ9NUH8 114 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 CLN8Q9UBY8 286 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 GNG8Q9UK08 70 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 RAXQ9Y2V3 346 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 PRUNE2Q8WUY3 3088 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 A0A1W2PRX2 142 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 TMEM30CPA0ZSE6 113 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 CDK2P24941 298 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 PSMB9P28065 219 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 HRH1P35367 487 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 AP2S1P53680 142 aaPredicted RBP3.99□□□□□ -1.77
SCAF11-212ENST00000549162 CYCSP99999 105 aaKnown RBP3.99□□□□□ -1.77
SCAF11-212ENST00000549162 FGL1Q08830 312 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 HERPUD1Q15011 391 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 LBHQ53QV2 105 aaPredicted RBP3.99□□□□□ -1.77
SCAF11-212ENST00000549162 TMEM128Q5BJH2 165 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 ACSM6Q6P461 480 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 FAM58AQ8N1B3 248 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 UBAC2Q8NBM4 344 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 TMEM104Q8NE00 496 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 LGALS14Q8TCE9 139 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 OTULINQ96BN8 352 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 ST6GAL2Q96JF0 529 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 GON7Q9BXV9 100 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 NPFFR1Q9GZQ6 430 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 ZNF665Q9H7R5 613 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 SAP30LQ9HAJ7 183 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 EDA2RQ9HAV5 297 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 TMEM165Q9HC07 324 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 MGAT4CQ9UBM8 478 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 VSIG4Q9Y279 399 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 U3KQV3 271 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 IGKV1-6A0A0C4DH72 117 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 RAD51DO75771 328 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 ATG12O94817 140 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 CDRT1O95170 752 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 OCM2P0CE71 109 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 LMO4P61968 165 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 ZNF154Q13106 437 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 CORO6Q6QEF8 472 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 CLEC2AQ6UVW9 174 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 OR1L8Q8NGR8 309 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 TERB2Q8NHR7 220 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 OSR1Q8TAX0 266 aaPredicted RBP3.99□□□□□ -1.77
SCAF11-212ENST00000549162 TMEM167AQ8TBQ9 72 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 ZNF431Q8TF32 576 aaPredicted RBP3.99□□□□□ -1.77
SCAF11-212ENST00000549162 CCDC107Q8WV48 283 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 GPHA2Q96T91 129 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 THAP7Q9BT49 309 aaPredicted RBP3.99□□□□□ -1.77
SCAF11-212ENST00000549162 ZNF436Q9C0F3 470 aaPredicted RBP3.99□□□□□ -1.77
SCAF11-212ENST00000549162 SLA2Q9H6Q3 261 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 RNF121Q9H920 327 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 PRELID3BQ9Y3B1 194 aa3.99□□□□□ -1.77
SCAF11-212ENST00000549162 TRBV9A0A0B4J1U6 114 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 TRAV38-1A0A0B4J264 116 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 H7C2Y5 167 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 CLIC3O95833 236 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 RLN1P04808 185 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 AREGP15514 252 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 ARSBP15848 533 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 PRTN3P24158 256 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 DEFA1P59665 94 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 DEFA3P59666 94 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 PIGFQ07326 219 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 SRSF6Q13247 344 aaKnown RBP3.98□□□□□ -1.77
SCAF11-212ENST00000549162 ATP6V1FQ16864 119 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 OR10H4Q8NGA5 316 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 RAB39BQ96DA2 213 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 WFIKKN1Q96NZ8 548 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 TXNDC17Q9BRA2 123 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms