RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 ELANEP08246 267 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 CGB3P0DN86 165 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 CGB7P0DN87 165 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 VDAC1P21796 283 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 POLR2IP36954 125 aaKnown RBP6.65□□□□□ -1.34
TROAP-208ENST00000548817 GPR12P47775 334 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 CDX1P47902 265 aaPredicted RBP6.65□□□□□ -1.34
TROAP-208ENST00000548817 NANOS3P60323 173 aaKnown RBP6.65□□□□□ -1.34
TROAP-208ENST00000548817 GABARAPL2P60520 117 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 ZNF816Q0VGE8 651 aaPredicted RBP6.65□□□□□ -1.34
TROAP-208ENST00000548817 MRPL28Q13084 256 aaKnown RBP6.65□□□□□ -1.34
TROAP-208ENST00000548817 FOXE3Q13461 319 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 KIR2DS1Q14954 304 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 CDK5R1Q15078 307 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 ELP2Q6IA86 826 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 ZNF773Q6PK81 442 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 STX19Q8N4C7 294 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 PXT1Q8NFP0 134 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 OR8H1Q8NGG4 311 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 OR51A4Q8NGJ6 313 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 OR10AC1Q8NH08 325 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 OR5AK2Q8NH90 309 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 IL17DQ8TAD2 202 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 NEK7Q8TDX7 302 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 EAF1Q96JC9 268 aaPredicted RBP6.65□□□□□ -1.34
TROAP-208ENST00000548817 C4orf36Q96KX1 117 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 GABARAPL3Q9BY60 117 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 RBM38Q9H0Z9 239 aaKnown RBP6.65□□□□□ -1.34
TROAP-208ENST00000548817 LINC00574Q9H8X3 128 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 PLGRKTQ9HBL7 147 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 RAB9BQ9NP90 201 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 LIN7CQ9NUP9 197 aaKnown RBP6.65□□□□□ -1.34
TROAP-208ENST00000548817 CHCHD3Q9NX63 227 aaKnown RBP6.65□□□□□ -1.34
TROAP-208ENST00000548817 ING4Q9UNL4 249 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 ZNF256Q9Y2P7 627 aaPredicted RBP6.65□□□□□ -1.34
TROAP-208ENST00000548817 CEPT1Q9Y6K0 416 aa6.65□□□□□ -1.34
TROAP-208ENST00000548817 HECTD4Q9Y4D8 3996 aa6.65□□□□□ -1.35
TROAP-208ENST00000548817 SORL1Q92673 2214 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 IGHV3-72A0A0B4J1Y9 119 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 TRAV24A0A0B4J272 114 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 TMEM30CPA0ZSE6 113 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 TMEM212A6NML5 194 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 NPIPB11E5RHQ5 1161 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 SDCBPO00560 298 aaPredicted RBP6.64□□□□□ -1.35
TROAP-208ENST00000548817 OR7C1O76099 320 aaPredicted RBP6.64□□□□□ -1.35
TROAP-208ENST00000548817 FADS2O95864 444 aaKnown RBP6.64□□□□□ -1.35
TROAP-208ENST00000548817 MOSP00540 346 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 CD2P06729 351 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 OR5H8P0DN80 308 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 CD1BP29016 333 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 SSTR5P35346 364 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 SOX6P35712 828 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 REG1BP48304 166 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 LUMP51884 338 aaPredicted RBP6.64□□□□□ -1.35
TROAP-208ENST00000548817 GBX2P52951 348 aaPredicted RBP6.64□□□□□ -1.35
TROAP-208ENST00000548817 TMBIM6P55061 237 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 ZP1P60852 638 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 SNRPGP62308 76 aaKnown RBP6.64□□□□□ -1.35
TROAP-208ENST00000548817 ADARB1P78563 741 aaKnown RBP6.64□□□□□ -1.35
TROAP-208ENST00000548817 EBI3Q14213 229 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 DIAPH2-AS1Q14236 149 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 DEFB136Q30KP8 78 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 ZNF260Q3ZCT1 412 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 UTF1Q5T230 341 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 RSBN1Q5VWQ0 802 aaPredicted RBP6.64□□□□□ -1.35
TROAP-208ENST00000548817 TMEM65Q6PI78 240 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 LHFPL3Q86UP9 236 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 CLVS1Q8IUQ0 354 aaPredicted RBP6.64□□□□□ -1.35
TROAP-208ENST00000548817 SUMF2Q8NBJ7 301 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 OR52M1Q8NGK5 317 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 GATAD1Q8WUU5 269 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 ARL11Q969Q4 196 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 PELI1Q96FA3 418 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 Q96MT0 163 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 TM2D3Q9BRN9 247 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 ALG8Q9BVK2 526 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 DPCDQ9BVM2 203 aaPredicted RBP6.64□□□□□ -1.35
TROAP-208ENST00000548817 METTL9Q9H1A3 318 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 ABCG5Q9H222 651 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 PAK1IP1Q9NWT1 392 aaPredicted RBP6.64□□□□□ -1.35
TROAP-208ENST00000548817 SCN3BQ9NY72 215 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 ST3GAL6Q9Y274 331 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 TPRKBQ9Y3C4 175 aa6.64□□□□□ -1.35
TROAP-208ENST00000548817 TRAV39A0A0B4J263 110 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 LINC01548A6NM66 108 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 SPINT2O43291 252 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 TXNL1O43396 289 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 INSL3P51460 131 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 PPP3R1P63098 170 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 PAX5Q02548 391 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 GALEQ14376 348 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 PIGYQ3MUY2 71 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 SLC25A30Q5SVS4 291 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 ATAD3CQ5T2N8 411 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 FAM27D1Q5T7N8 215 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 LINC00299Q6ZSB3 139 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 LINC00596Q86U02 117 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 ABCA13Q86UQ4 5058 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 IZUMO1Q8IYV9 350 aa6.63□□□□□ -1.35
TROAP-208ENST00000548817 SYS1Q8N2H4 156 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms