RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 DYNLT3P51808 116 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 OR10A3P58181 314 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 TMEM95Q3KNT9 176 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 HES5Q5TA89 166 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 Q6ZS46 218 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 SPARTQ8N0X7 666 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 KLHDC1Q8N7A1 406 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 KCNG3Q8TAE7 436 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 CAPSLQ8WWF8 208 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 FAAP24Q9BTP7 215 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 ZNF702PQ9H963 129 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 NDUFB11Q9NX14 153 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 FBLN5Q9UBX5 448 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 SMIM30A4D0T7 59 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 SH2D7A6NKC9 451 aaPredicted RBP12.65□□□□□ -0.38
DDX54-205ENST00000548786 TMEM14DPA8MWL7 114 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 SLC17A2O00624 439 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 TIMM23O14925 209 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 SPINT2O43291 252 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 HBZP02008 142 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 CHATP28329 748 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 BRS3P32247 399 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 MNDAP41218 407 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 KIR2DS4P43632 304 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 ARHGDIBP52566 201 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 EFNB2P52799 333 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 BLCAPP62952 87 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 QRFPP83859 136 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 MADCAM1Q13477 382 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 C6orf183Q5T699 404 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 OR51D1Q8NGF3 324 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 OR56B4Q8NH76 319 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 SETD6Q8TBK2 473 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 MRPL30Q8TCC3 161 aaKnown RBP12.65□□□□□ -0.38
DDX54-205ENST00000548786 CREB3L1Q96BA8 519 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 RANBP3Q9H6Z4 567 aaPredicted RBP12.65□□□□□ -0.38
DDX54-205ENST00000548786 GFOD1Q9NXC2 390 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 GNG12Q9UBI6 72 aa12.65□□□□□ -0.38
DDX54-205ENST00000548786 SHISA3A0PJX4 238 aa12.64□□□□□ -0.39
DDX54-205ENST00000548786 SLC31A2O15432 143 aa12.64□□□□□ -0.39
DDX54-205ENST00000548786 SOCS1O15524 211 aa12.64□□□□□ -0.39
DDX54-205ENST00000548786 ORC5O43913 435 aa12.64□□□□□ -0.39
DDX54-205ENST00000548786 BLVRBP30043 206 aaPredicted RBP12.64□□□□□ -0.39
DDX54-205ENST00000548786 LOXL3P58215 753 aa12.64□□□□□ -0.39
DDX54-205ENST00000548786 PLA2G7Q13093 441 aa12.64□□□□□ -0.39
DDX54-205ENST00000548786 GNMTQ14749 295 aa12.64□□□□□ -0.39
DDX54-205ENST00000548786 PRR31Q5SQ13 230 aa12.64□□□□□ -0.39
DDX54-205ENST00000548786 UBE2UQ5VVX9 321 aa12.64□□□□□ -0.39
DDX54-205ENST00000548786 C22orf42Q6IC83 251 aa12.64□□□□□ -0.39
DDX54-205ENST00000548786 CCDC144NLQ6NUI1 221 aa12.64□□□□□ -0.39
DDX54-205ENST00000548786 DRAM1Q8N682 238 aa12.64□□□□□ -0.39
DDX54-205ENST00000548786 OR10A7Q8NGE5 316 aa12.64□□□□□ -0.39
DDX54-205ENST00000548786 SLC25A33Q9BSK2 321 aa12.64□□□□□ -0.39
DDX54-205ENST00000548786 LPAR5Q9H1C0 372 aa12.64□□□□□ -0.39
DDX54-205ENST00000548786 TAF9BQ9HBM6 251 aa12.64□□□□□ -0.39
DDX54-205ENST00000548786 CHMP1AQ9HD42 196 aaPredicted RBP12.64□□□□□ -0.39
DDX54-205ENST00000548786 V9GY05 133 aa12.64□□□□□ -0.39
DDX54-205ENST00000548786 CMYA5Q8N3K9 4069 aa12.63□□□□□ -0.39
DDX54-205ENST00000548786 IGHV3-72A0A0B4J1Y9 119 aa12.63□□□□□ -0.39
DDX54-205ENST00000548786 CCRL2O00421 344 aa12.63□□□□□ -0.39
DDX54-205ENST00000548786 SNRNP70P08621 437 aaKnown RBP12.63□□□□□ -0.39
DDX54-205ENST00000548786 MYL9P24844 172 aa12.63□□□□□ -0.39
DDX54-205ENST00000548786 HES1Q14469 280 aa12.63□□□□□ -0.39
DDX54-205ENST00000548786 HNF4GQ14541 408 aa12.63□□□□□ -0.39
DDX54-205ENST00000548786 ZNF773Q6PK81 442 aa12.63□□□□□ -0.39
DDX54-205ENST00000548786 OR52L2PQ8NGH6 319 aa12.63□□□□□ -0.39
DDX54-205ENST00000548786 FAM3DQ96BQ1 224 aa12.63□□□□□ -0.39
DDX54-205ENST00000548786 RBMXL1Q96E39 390 aaKnown RBP12.63□□□□□ -0.39
DDX54-205ENST00000548786 HDHD3Q9BSH5 251 aaPredicted RBP12.63□□□□□ -0.39
DDX54-205ENST00000548786 TM2D1Q9BX74 207 aa12.63□□□□□ -0.39
DDX54-205ENST00000548786 PRSS22Q9GZN4 317 aa12.63□□□□□ -0.39
DDX54-205ENST00000548786 ZNF696Q9H7X3 374 aa12.63□□□□□ -0.39
DDX54-205ENST00000548786 PLEKHJ1Q9NW61 149 aa12.63□□□□□ -0.39
DDX54-205ENST00000548786 KCNIP1Q9NZI2 227 aa12.63□□□□□ -0.39
DDX54-205ENST00000548786 LRRC42Q9Y546 428 aa12.63□□□□□ -0.39
DDX54-205ENST00000548786 A0A0B4J203 849 aa12.62□□□□□ -0.39
DDX54-205ENST00000548786 A0A1W2PPI3 338 aa12.62□□□□□ -0.39
DDX54-205ENST00000548786 HSD17B6O14756 317 aa12.62□□□□□ -0.39
DDX54-205ENST00000548786 MRPS14O60783 128 aaKnown RBP12.62□□□□□ -0.39
DDX54-205ENST00000548786 PEX14O75381 377 aa12.62□□□□□ -0.39
DDX54-205ENST00000548786 CA11O75493 328 aa12.62□□□□□ -0.39
DDX54-205ENST00000548786 GLAP06280 429 aa12.62□□□□□ -0.39
DDX54-205ENST00000548786 CD37P11049 281 aa12.62□□□□□ -0.39
DDX54-205ENST00000548786 VEGFCP49767 419 aa12.62□□□□□ -0.39
DDX54-205ENST00000548786 NEDD8Q15843 81 aa12.62□□□□□ -0.39
DDX54-205ENST00000548786 C2orf76Q3KRA6 126 aa12.62□□□□□ -0.39
DDX54-205ENST00000548786 ABCA11PQ4W5N1 156 aa12.62□□□□□ -0.39
DDX54-205ENST00000548786 TREML4Q6UXN2 200 aa12.62□□□□□ -0.39
DDX54-205ENST00000548786 OR2W3Q7Z3T1 314 aa12.62□□□□□ -0.39
DDX54-205ENST00000548786 MOB3BQ86TA1 216 aa12.62□□□□□ -0.39
DDX54-205ENST00000548786 LYG1Q8N1E2 194 aa12.62□□□□□ -0.39
DDX54-205ENST00000548786 GAPTQ8N292 157 aa12.62□□□□□ -0.39
DDX54-205ENST00000548786 OR52M1Q8NGK5 317 aa12.62□□□□□ -0.39
DDX54-205ENST00000548786 URM1Q9BTM9 101 aaKnown RBP12.62□□□□□ -0.39
DDX54-205ENST00000548786 OR2S2Q9NQN1 319 aa12.62□□□□□ -0.39
DDX54-205ENST00000548786 SERTAD4Q9NUC0 356 aa12.62□□□□□ -0.39
DDX54-205ENST00000548786 TMEM272A0A1B0GTI8 110 aa12.61□□□□□ -0.39
DDX54-205ENST00000548786 TRDV1A0A1B0GX56 115 aa12.61□□□□□ -0.39
DDX54-205ENST00000548786 OOSP1A8MZH6 123 aa12.61□□□□□ -0.39
DDX54-205ENST00000548786 H3BUI4 141 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms