RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 EIF3GO75821 320 aaKnown RBP eCLIP12.42□□□□□ -0.42
LETMD1-209ENST00000547318 CST7O76096 145 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 TMEM50AO95807 157 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 PDGFBP01127 241 aaPredicted RBP12.42□□□□□ -0.42
LETMD1-209ENST00000547318 IGHV2-5P01817 119 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 CD46P15529 392 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 MPLP40238 635 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 MEOX1P50221 254 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 NOVA1P51513 510 aaKnown RBP12.42□□□□□ -0.42
LETMD1-209ENST00000547318 B2MP61769 119 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 ETV3LQ6ZN32 361 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 TCTEX1D2Q8WW35 142 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 PINX1Q96BK5 328 aaKnown RBP12.42□□□□□ -0.42
LETMD1-209ENST00000547318 TVP23CQ96ET8 276 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 YPEL4Q96NS1 127 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 HS3ST6Q96QI5 342 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 NIPSNAP3BQ9BS92 247 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 SEBOXQ9HB31 216 aaPredicted RBP12.42□□□□□ -0.42
LETMD1-209ENST00000547318 CRIM1Q9NZV1 1036 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 IL36RNQ9UBH0 155 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 ERRFI1Q9UJM3 462 aaPredicted RBP12.42□□□□□ -0.42
LETMD1-209ENST00000547318 SYNGR2O43760 224 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 TUBG1P23258 451 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 ERVK11-1P61568 191 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 RPS23P62266 143 aaKnown RBP12.42□□□□□ -0.42
LETMD1-209ENST00000547318 ICAM4Q14773 271 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 ZNF146Q15072 292 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 SLC25A24Q6NUK1 477 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 HEPN1Q6WQI6 88 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 TCTEX1D1Q8N7M0 179 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 CLDND2Q8NHS1 167 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 P2RX4Q99571 388 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 ZNF251Q9BRH9 671 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 TUBG2Q9NRH3 451 aa12.42□□□□□ -0.42
LETMD1-209ENST00000547318 PCP4L1A6NKN8 68 aa12.41□□□□□ -0.42
LETMD1-209ENST00000547318 H3BQ15 152 aa12.41□□□□□ -0.42
LETMD1-209ENST00000547318 AP4M1O00189 453 aa12.41□□□□□ -0.42
LETMD1-209ENST00000547318 HSPB6O14558 160 aa12.41□□□□□ -0.42
LETMD1-209ENST00000547318 HS3ST1O14792 307 aa12.41□□□□□ -0.42
LETMD1-209ENST00000547318 GPR37O15354 613 aa12.41□□□□□ -0.42
LETMD1-209ENST00000547318 TAGLN2P37802 199 aaKnown RBP12.41□□□□□ -0.42
LETMD1-209ENST00000547318 TGFBR3Q03167 851 aa12.41□□□□□ -0.42
LETMD1-209ENST00000547318 ZNF154Q13106 437 aa12.41□□□□□ -0.42
LETMD1-209ENST00000547318 BATF2Q8N1L9 274 aa12.41□□□□□ -0.42
LETMD1-209ENST00000547318 FAM24BQ8N5W8 94 aa12.41□□□□□ -0.42
LETMD1-209ENST00000547318 MBD3L1Q8WWY6 194 aa12.41□□□□□ -0.42
LETMD1-209ENST00000547318 RDH5Q92781 318 aa12.41□□□□□ -0.42
LETMD1-209ENST00000547318 MUCL1Q96DR8 90 aa12.41□□□□□ -0.42
LETMD1-209ENST00000547318 TMEM242Q9NWH2 141 aa12.41□□□□□ -0.42
LETMD1-209ENST00000547318 PUS1Q9Y606 427 aaKnown RBP eCLIP12.41□□□□□ -0.42
LETMD1-209ENST00000547318 LOC102723971A0A1B0GUV8 181 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 CDRT15L2A8MXV6 281 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 SH2D1BO14796 132 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 IL18BPO95998 194 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 F10P00742 488 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 PSG2P11465 335 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 RAC2P15153 192 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 AKR1C3P42330 323 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 FOXG1P55316 489 aaPredicted RBP12.4□□□□□ -0.42
LETMD1-209ENST00000547318 UBE2KP61086 200 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 C20orf204Q6ZNR8 217 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 OR13D1Q8NGV5 346 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 TCEAL3Q969E4 200 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 RARRES2Q99969 163 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 CISD1Q9NZ45 108 aaKnown RBP12.4□□□□□ -0.42
LETMD1-209ENST00000547318 FOXJ2Q9P0K8 574 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 TIMM9Q9Y5J7 89 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 IFNA1P01562 189 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 PGA5P0DJD9 388 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 ASCL1P50553 236 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 ZNF429Q86V71 674 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 MDP1Q86V88 176 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 TMEM217Q8N7C4 229 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 FAM216AQ8WUB2 273 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 GMPPAQ96IJ6 420 aaPredicted RBP12.4□□□□□ -0.42
LETMD1-209ENST00000547318 C20orf24Q9BUV8 137 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 HES7Q9BYE0 225 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 TOLLIPQ9H0E2 274 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 TMEM9BQ9NQ34 198 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 TRAPPC2LQ9UL33 140 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 LIPGQ9Y5X9 500 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 SDK1Q7Z5N4 2213 aa12.4□□□□□ -0.42
LETMD1-209ENST00000547318 IQCF6A8MYZ5 107 aa12.39□□□□□ -0.43
LETMD1-209ENST00000547318 SLC33A1O00400 549 aaPredicted RBP12.39□□□□□ -0.43
LETMD1-209ENST00000547318 PPIHO43447 177 aaKnown RBP12.39□□□□□ -0.43
LETMD1-209ENST00000547318 CA6P23280 308 aa12.39□□□□□ -0.43
LETMD1-209ENST00000547318 CCL20P78556 96 aa12.39□□□□□ -0.43
LETMD1-209ENST00000547318 TESK1Q15569 626 aa12.39□□□□□ -0.43
LETMD1-209ENST00000547318 OR51H1Q8NH63 302 aa12.39□□□□□ -0.43
LETMD1-209ENST00000547318 ISOC2Q96AB3 205 aa12.39□□□□□ -0.43
LETMD1-209ENST00000547318 RAB39BQ96DA2 213 aa12.39□□□□□ -0.43
LETMD1-209ENST00000547318 PSENENQ9NZ42 101 aa12.39□□□□□ -0.43
LETMD1-209ENST00000547318 PRSS50Q9UI38 385 aa12.39□□□□□ -0.43
LETMD1-209ENST00000547318 A0A1W2PPE2 198 aa12.38□□□□□ -0.43
LETMD1-209ENST00000547318 TNFSF12O43508 249 aa12.38□□□□□ -0.43
LETMD1-209ENST00000547318 FABP9Q0Z7S8 132 aa12.38□□□□□ -0.43
LETMD1-209ENST00000547318 ATP6V1FQ16864 119 aa12.38□□□□□ -0.43
LETMD1-209ENST00000547318 LRRC75BQ2VPJ9 315 aa12.38□□□□□ -0.43
LETMD1-209ENST00000547318 OR2T2Q6IF00 324 aa12.38□□□□□ -0.43
LETMD1-209ENST00000547318 TMEM105Q8N8V8 129 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms