RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 ARL6IP5O75915 188 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 OR5F1O95221 314 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 DHFRP00374 187 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 SERPINA5P05154 406 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 BCHEP06276 602 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 DBIP07108 87 aaKnown RBP3.78□□□□□ -1.8
NPAS3-204ENST00000546849 IL3P08700 152 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 CCL5P13501 91 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 ZNF823P16415 610 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 CSNK1A1P48729 337 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 VBP1P61758 197 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 HBA1P69905 142 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 REEP5Q00765 189 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 PRDX1Q06830 199 aaKnown RBP3.78□□□□□ -1.8
NPAS3-204ENST00000546849 QPRTQ15274 297 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 SF3A2Q15428 464 aaKnown RBP3.78□□□□□ -1.8
NPAS3-204ENST00000546849 FBXO48Q5FWF7 155 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 SAXO2Q658L1 398 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 TBPL2Q6SJ96 375 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 PLET1Q6UQ28 207 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 TMEM25Q86YD3 366 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 OR4A4PQ8NGN8 299 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 DEDD2Q8WXF8 326 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 C7orf50Q9BRJ6 194 aaKnown RBP3.78□□□□□ -1.8
NPAS3-204ENST00000546849 C20orf24Q9BUV8 137 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 TMEM27Q9HBJ8 222 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 TMEM165Q9HC07 324 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 CHD7Q9P2D1 2997 aa3.78□□□□□ -1.8
NPAS3-204ENST00000546849 PRRC2BQ5JSZ5 2229 aaKnown RBP3.78□□□□□ -1.8
NPAS3-204ENST00000546849 MYLKQ15746 1914 aa3.78□□□□□ -1.81
NPAS3-204ENST00000546849 FABP12A6NFH5 140 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 METTL15A6NJ78 407 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 RIIAD1A6NNX1 92 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 LYRM9A8MSI8 78 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 ZNF670-ZNF695F2Z2N8 137 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 POLR1CO15160 346 aaPredicted RBP3.77□□□□□ -1.81
NPAS3-204ENST00000546849 HMGB3O15347 200 aaKnown RBP3.77□□□□□ -1.81
NPAS3-204ENST00000546849 DNAJB6O75190 326 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 ZNF324O75467 553 aaPredicted RBP3.77□□□□□ -1.81
NPAS3-204ENST00000546849 CCNKO75909 580 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 IFNA16P05015 189 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 GUSBP08236 651 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 TACSTD2P09758 323 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 ZNF3P17036 446 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 ERP29P30040 261 aaKnown RBP3.77□□□□□ -1.81
NPAS3-204ENST00000546849 FAUP35544 74 aaKnown RBP3.77□□□□□ -1.81
NPAS3-204ENST00000546849 AQP2P41181 271 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 RGS8P57771 180 aaPredicted RBP3.77□□□□□ -1.81
NPAS3-204ENST00000546849 TSPAN31Q12999 210 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 IHHQ14623 411 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 SPCS2Q15005 226 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 KLHL12Q53G59 568 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 ADNP2Q6IQ32 1131 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 FAM131AQ6UXB0 335 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 RASSF6Q6ZTQ3 369 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 ZNF550Q7Z398 422 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 VTCN1Q7Z7D3 282 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 TMEM150AQ86TG1 271 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 MSRB3Q8IXL7 192 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 CLECL1Q8IZS7 167 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 LINC00469Q8N7U9 141 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 CDRT4Q8N9R6 151 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 OR52N1Q8NH53 320 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 OR5W2Q8NH69 310 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 OR4C6Q8NH72 309 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 DIRAS2Q96HU8 199 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 WFIKKN1Q96NZ8 548 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 MICU1Q9BPX6 476 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 MS4A8Q9BY19 250 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 NXF2Q9GZY0 626 aaKnown RBP3.77□□□□□ -1.81
NPAS3-204ENST00000546849 OR51B5Q9H339 312 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 KIR3DX1Q9H7L2 352 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 NMNAT1Q9HAN9 279 aaPredicted RBP3.77□□□□□ -1.81
NPAS3-204ENST00000546849 ZNF160Q9HCG1 818 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 ACER3Q9NUN7 267 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 FKBP14Q9NWM8 211 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 NDUFB11Q9NX14 153 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 EMC3Q9P0I2 261 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 TAC3Q9UHF0 121 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 ZNF222Q9UK12 451 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 TANC1Q9C0D5 1861 aa3.77□□□□□ -1.81
NPAS3-204ENST00000546849 SPTAN1Q13813 2472 aaKnown RBP3.77□□□□□ -1.81
NPAS3-204ENST00000546849 ANAPC1Q9H1A4 1944 aa3.76□□□□□ -1.81
NPAS3-204ENST00000546849 NBEAQ8NFP9 2946 aa3.76□□□□□ -1.81
NPAS3-204ENST00000546849 ZNF879B4DU55 563 aa3.76□□□□□ -1.81
NPAS3-204ENST00000546849 C5orf67F2Z3F1 127 aa3.76□□□□□ -1.81
NPAS3-204ENST00000546849 SIRPB1O00241 398 aa3.76□□□□□ -1.81
NPAS3-204ENST00000546849 PHYHO14832 338 aa3.76□□□□□ -1.81
NPAS3-204ENST00000546849 ERI3O43414 337 aaKnown RBP3.76□□□□□ -1.81
NPAS3-204ENST00000546849 LDOC1O95751 146 aaPredicted RBP3.76□□□□□ -1.81
NPAS3-204ENST00000546849 ERGP11308 486 aa3.76□□□□□ -1.81
NPAS3-204ENST00000546849 HLA-EP13747 358 aa3.76□□□□□ -1.81
NPAS3-204ENST00000546849 HIST1H1TP22492 207 aaPredicted RBP3.76□□□□□ -1.81
NPAS3-204ENST00000546849 CPN2P22792 545 aa3.76□□□□□ -1.81
NPAS3-204ENST00000546849 GADD45AP24522 165 aa3.76□□□□□ -1.81
NPAS3-204ENST00000546849 LCN1P31025 176 aa3.76□□□□□ -1.81
NPAS3-204ENST00000546849 RBM34P42696 430 aaKnown RBP3.76□□□□□ -1.81
NPAS3-204ENST00000546849 CDKN2CP42773 168 aa3.76□□□□□ -1.81
NPAS3-204ENST00000546849 CSNK1EP49674 416 aaKnown RBP3.76□□□□□ -1.81
NPAS3-204ENST00000546849 BLVRAP53004 296 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms