RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 IGHV2-26A0A0B4J1V2 119 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 A0A1W2PRD5 423 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 A0A1W2PRF3 423 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 A0A1W2PRM7 423 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 MEIOCA2RUB1 952 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 C12orf77C9JDV5 145 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 C15orf65H3BRN8 121 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 SDCBPO00560 298 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-213ENST00000546820 HBZP02008 142 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 ARG1P05089 322 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 CD34P28906 385 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 GNG2P59768 71 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 LTC4SQ16873 150 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 ZNF260Q3ZCT1 412 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 RUSC1-AS1Q66K80 236 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 OLFML2AQ68BL7 652 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 HCP5Q6MZN7 132 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 ZNF880Q6PDB4 577 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 PRR18Q8N4B5 295 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 C22orf15Q8WYQ4 148 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 CREB3L1Q96BA8 519 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 JMJD8Q96S16 334 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 Q9N2K0 584 aa11.23□□□□□ -0.61
PTCH1-213ENST00000546820 TBL2Q9Y4P3 447 aaKnown RBP11.23□□□□□ -0.61
PTCH1-213ENST00000546820 A0A087X0M5 115 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 A0A1B0GX30 115 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 FAM25AB3EWG3 89 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 FAM25CB3EWG5 89 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 FAM25GB3EWG6 89 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 TRDCB7Z8K6 153 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 F2RL2O00254 374 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 RGS5O15539 181 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 HPGDSO60760 199 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 FBP1P09467 338 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 DTYMKP23919 212 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 SAA4P35542 130 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 KIR2DS4P43632 304 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 HTD2P86397 168 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 KIR2DS1Q14954 304 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 SRSF7Q16629 238 aaKnown RBP eCLIP11.22□□□□□ -0.61
PTCH1-213ENST00000546820 TMEM69Q5SWH9 247 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 BCL6BQ8N143 479 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-213ENST00000546820 PIP4P2Q8N4L2 257 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 OR9G1Q8NH87 305 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 OR1L1Q8NH94 360 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 SLC6A7Q99884 636 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 HDHD3Q9BSH5 251 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-213ENST00000546820 RBM38Q9H0Z9 239 aaKnown RBP11.22□□□□□ -0.61
PTCH1-213ENST00000546820 GNG12Q9UBI6 72 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 ADAM30Q9UKF2 790 aa11.22□□□□□ -0.61
PTCH1-213ENST00000546820 TCF21O43680 179 aa11.21□□□□□ -0.61
PTCH1-213ENST00000546820 RGS11O94810 467 aa11.21□□□□□ -0.61
PTCH1-213ENST00000546820 MELTFP08582 738 aa11.21□□□□□ -0.61
PTCH1-213ENST00000546820 HTR1DP28221 377 aa11.21□□□□□ -0.61
PTCH1-213ENST00000546820 GDNFP39905 211 aa11.21□□□□□ -0.61
PTCH1-213ENST00000546820 CEACAM3P40198 252 aa11.21□□□□□ -0.61
PTCH1-213ENST00000546820 HMGN3Q15651 99 aa11.21□□□□□ -0.61
PTCH1-213ENST00000546820 Q3ZCU0 254 aa11.21□□□□□ -0.61
PTCH1-213ENST00000546820 MINOS1Q5TGZ0 78 aa11.21□□□□□ -0.61
PTCH1-213ENST00000546820 STEAP3Q658P3 488 aa11.21□□□□□ -0.61
PTCH1-213ENST00000546820 ZNF626Q68DY1 528 aa11.21□□□□□ -0.61
PTCH1-213ENST00000546820 BEND2Q8NDZ0 799 aa11.21□□□□□ -0.61
PTCH1-213ENST00000546820 MALSU1Q96EH3 234 aa11.21□□□□□ -0.61
PTCH1-213ENST00000546820 AUNIPQ9H7T9 357 aa11.21□□□□□ -0.61
PTCH1-213ENST00000546820 OR2S2Q9NQN1 319 aa11.21□□□□□ -0.61
PTCH1-213ENST00000546820 GFOD1Q9NXC2 390 aa11.21□□□□□ -0.61
PTCH1-213ENST00000546820 MINOS1-NBL1R4GNA1 71 aa11.21□□□□□ -0.61
PTCH1-213ENST00000546820 NIPBLQ6KC79 2804 aaeCLIP11.21□□□□□ -0.62
PTCH1-213ENST00000546820 A0A0U1RQK1 487 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 DPPA5A6NC42 116 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 TMEM235A6NFC5 223 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 ODF3BA8MYP8 253 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 J3QR06 171 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 EIF4EP06730 217 aaKnown RBP11.2□□□□□ -0.62
PTCH1-213ENST00000546820 FCGR3AP08637 254 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 ELK1P19419 428 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 CBX5P45973 191 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 RIPPLY3P57055 190 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 LOXL3P58215 753 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 HLA-DRB3P79483 266 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 DEFB112Q30KQ8 113 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 MCFD2Q8NI22 146 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 UBALD1Q8TB05 177 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 C15orf40Q8WUR7 153 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 IL1F10Q8WWZ1 152 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 CYYR1Q96J86 154 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 ST6GALNAC5Q9BVH7 336 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 PRDM13Q9H4Q3 707 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 ZNF286AQ9HBT8 521 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 DPM3Q9P2X0 92 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 JPT1Q9UK76 154 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 PSG11Q9UQ72 335 aa11.2□□□□□ -0.62
PTCH1-213ENST00000546820 MRPS7Q9Y2R9 242 aaKnown RBP11.2□□□□□ -0.62
PTCH1-213ENST00000546820 AMMECR1Q9Y4X0 333 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-213ENST00000546820 FAM172BPA6NC97 362 aa11.19□□□□□ -0.62
PTCH1-213ENST00000546820 LEUTXA8MZ59 168 aa11.19□□□□□ -0.62
PTCH1-213ENST00000546820 HSPA12AO43301 675 aa11.19□□□□□ -0.62
PTCH1-213ENST00000546820 YPEL1O60688 119 aa11.19□□□□□ -0.62
PTCH1-213ENST00000546820 TPPPO94811 219 aa11.19□□□□□ -0.62
PTCH1-213ENST00000546820 ZBTB25P24278 435 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms