RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 TAF9BQ9HBM6 251 aa13.65□□□□□ -0.22
CCDC38-203ENST00000546803 ZNF286AQ9HBT8 521 aa13.65□□□□□ -0.22
CCDC38-203ENST00000546803 CHMP1AQ9HD42 196 aaPredicted RBP13.65□□□□□ -0.22
CCDC38-203ENST00000546803 C12orf4Q9NQ89 552 aa13.65□□□□□ -0.22
CCDC38-203ENST00000546803 ZNRD1Q9P1U0 126 aa13.65□□□□□ -0.22
CCDC38-203ENST00000546803 SCOCQ9UIL1 159 aa13.65□□□□□ -0.22
CCDC38-203ENST00000546803 MGAT4AQ9UM21 535 aa13.65□□□□□ -0.22
CCDC38-203ENST00000546803 SPATA2Q9UM82 520 aa13.65□□□□□ -0.22
CCDC38-203ENST00000546803 JMJD1CQ15652 2540 aa13.65□□□□□ -0.22
CCDC38-203ENST00000546803 SERPINE3A8MV23 424 aa13.64□□□□□ -0.23
CCDC38-203ENST00000546803 IGLV1-47P01700 117 aa13.64□□□□□ -0.23
CCDC38-203ENST00000546803 HBZP02008 142 aa13.64□□□□□ -0.23
CCDC38-203ENST00000546803 HIST1H1DP16402 221 aaKnown RBP13.64□□□□□ -0.23
CCDC38-203ENST00000546803 HTR1DP28221 377 aa13.64□□□□□ -0.23
CCDC38-203ENST00000546803 IER3P46695 156 aa13.64□□□□□ -0.23
CCDC38-203ENST00000546803 MRPS15P82914 257 aaKnown RBP13.64□□□□□ -0.23
CCDC38-203ENST00000546803 SRSF2Q01130 221 aaKnown RBP13.64□□□□□ -0.23
CCDC38-203ENST00000546803 AANATQ16613 207 aa13.64□□□□□ -0.23
CCDC38-203ENST00000546803 LTC4SQ16873 150 aa13.64□□□□□ -0.23
CCDC38-203ENST00000546803 Q3ZCU0 254 aa13.64□□□□□ -0.23
CCDC38-203ENST00000546803 ZNF880Q6PDB4 577 aa13.64□□□□□ -0.23
CCDC38-203ENST00000546803 OR4P4Q8NGL7 312 aa13.64□□□□□ -0.23
CCDC38-203ENST00000546803 NDNFQ8TB73 568 aa13.64□□□□□ -0.23
CCDC38-203ENST00000546803 FAM216AQ8WUB2 273 aa13.64□□□□□ -0.23
CCDC38-203ENST00000546803 KCTD12Q96CX2 325 aaKnown RBP13.64□□□□□ -0.23
CCDC38-203ENST00000546803 CYYR1Q96J86 154 aa13.64□□□□□ -0.23
CCDC38-203ENST00000546803 CMSS1Q9BQ75 279 aaKnown RBP13.64□□□□□ -0.23
CCDC38-203ENST00000546803 NAA50Q9GZZ1 169 aaKnown RBP13.64□□□□□ -0.23
CCDC38-203ENST00000546803 RHBDL2Q9NX52 303 aa13.64□□□□□ -0.23
CCDC38-203ENST00000546803 DPM3Q9P2X0 92 aa13.64□□□□□ -0.23
CCDC38-203ENST00000546803 KCNK7Q9Y2U2 307 aa13.64□□□□□ -0.23
CCDC38-203ENST00000546803 ZFHX3Q15911 3703 aa13.64□□□□□ -0.23
CCDC38-203ENST00000546803 A0A0A6YYH2 397 aa13.63□□□□□ -0.23
CCDC38-203ENST00000546803 FAM172BPA6NC97 362 aa13.63□□□□□ -0.23
CCDC38-203ENST00000546803 BTBD17A6NE02 478 aa13.63□□□□□ -0.23
CCDC38-203ENST00000546803 A6NJ64 397 aa13.63□□□□□ -0.23
CCDC38-203ENST00000546803 SDCBPO00560 298 aaPredicted RBP13.63□□□□□ -0.23
CCDC38-203ENST00000546803 MFNGO00587 321 aa13.63□□□□□ -0.23
CCDC38-203ENST00000546803 RNASE1P07998 156 aaKnown RBP13.63□□□□□ -0.23
CCDC38-203ENST00000546803 CD3GP09693 182 aa13.63□□□□□ -0.23
CCDC38-203ENST00000546803 LOXL3P58215 753 aa13.63□□□□□ -0.23
CCDC38-203ENST00000546803 HLA-DRB5Q30154 266 aa13.63□□□□□ -0.23
CCDC38-203ENST00000546803 LHFPL4Q7Z7J7 247 aa13.63□□□□□ -0.23
CCDC38-203ENST00000546803 OR5H6Q8NGV6 325 aa13.63□□□□□ -0.23
CCDC38-203ENST00000546803 OR5R1Q8NH85 324 aa13.63□□□□□ -0.23
CCDC38-203ENST00000546803 C17orf50Q8WW18 174 aa13.63□□□□□ -0.23
CCDC38-203ENST00000546803 PHF21AQ96BD5 680 aa13.63□□□□□ -0.23
CCDC38-203ENST00000546803 BCL7BQ9BQE9 202 aa13.63□□□□□ -0.23
CCDC38-203ENST00000546803 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCDC38-203ENST00000546803 GFOD1Q9NXC2 390 aa13.63□□□□□ -0.23
CCDC38-203ENST00000546803 PSG11Q9UQ72 335 aa13.63□□□□□ -0.23
CCDC38-203ENST00000546803 AMMECR1Q9Y4X0 333 aaPredicted RBP13.63□□□□□ -0.23
CCDC38-203ENST00000546803 SVEP1Q4LDE5 3571 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 RNF212BA8MTL3 300 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 LEUTXA8MZ59 168 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 J3QR06 171 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 GNB3P16520 340 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 CEACAM3P40198 252 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 HTD2P86397 168 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 HMGN3Q15651 99 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 KRTAP24-1Q3LI83 254 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 PRR18Q8N4B5 295 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 C8orf31Q8N9H6 132 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 OR1L1Q8NH94 360 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 UBALD1Q8TB05 177 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 SETD6Q8TBK2 473 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 RAB2BQ8WUD1 216 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 GALMQ96C23 342 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 SLC25A38Q96DW6 304 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 DUX5Q96PT3 197 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 MMP28Q9H239 520 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 GNG12Q9UBI6 72 aa13.62□□□□□ -0.23
CCDC38-203ENST00000546803 VGLL3A8MV65 326 aa13.61□□□□□ -0.23
CCDC38-203ENST00000546803 OOSP1A8MZH6 123 aa13.61□□□□□ -0.23
CCDC38-203ENST00000546803 BUB1B-PAK6H3BSN5 160 aa13.61□□□□□ -0.23
CCDC38-203ENST00000546803 IGHV4-59P01825 116 aa13.61□□□□□ -0.23
CCDC38-203ENST00000546803 GSTP1P09211 210 aaKnown RBP13.61□□□□□ -0.23
CCDC38-203ENST00000546803 RORCP51449 518 aa13.61□□□□□ -0.23
CCDC38-203ENST00000546803 TMBIM6P55061 237 aa13.61□□□□□ -0.23
CCDC38-203ENST00000546803 SSX2Q16385 188 aa13.61□□□□□ -0.23
CCDC38-203ENST00000546803 LRRC75BQ2VPJ9 315 aa13.61□□□□□ -0.23
CCDC38-203ENST00000546803 CDNFQ49AH0 187 aa13.61□□□□□ -0.23
CCDC38-203ENST00000546803 LDLRAD2Q5SZI1 272 aa13.61□□□□□ -0.23
CCDC38-203ENST00000546803 OLFML2AQ68BL7 652 aa13.61□□□□□ -0.23
CCDC38-203ENST00000546803 C16orf87Q6PH81 154 aa13.61□□□□□ -0.23
CCDC38-203ENST00000546803 CLVS1Q8IUQ0 354 aaPredicted RBP13.61□□□□□ -0.23
CCDC38-203ENST00000546803 SSX3Q99909 188 aa13.61□□□□□ -0.23
CCDC38-203ENST00000546803 HDHD3Q9BSH5 251 aaPredicted RBP13.61□□□□□ -0.23
CCDC38-203ENST00000546803 ABCG5Q9H222 651 aa13.61□□□□□ -0.23
CCDC38-203ENST00000546803 DCSTAMPQ9H295 470 aa13.61□□□□□ -0.23
CCDC38-203ENST00000546803 Q9N2K0 584 aa13.61□□□□□ -0.23
CCDC38-203ENST00000546803 OR2S2Q9NQN1 319 aa13.61□□□□□ -0.23
CCDC38-203ENST00000546803 DIABLOQ9NR28 239 aa13.61□□□□□ -0.23
CCDC38-203ENST00000546803 JPT1Q9UK76 154 aa13.61□□□□□ -0.23
CCDC38-203ENST00000546803 A0A075B6Q4 140 aa13.6□□□□□ -0.23
CCDC38-203ENST00000546803 DYNLT3P51808 116 aa13.6□□□□□ -0.23
CCDC38-203ENST00000546803 ARFRP1Q13795 201 aa13.6□□□□□ -0.23
CCDC38-203ENST00000546803 UTF1Q5T230 341 aa13.6□□□□□ -0.23
CCDC38-203ENST00000546803 STEAP3Q658P3 488 aa13.6□□□□□ -0.23
CCDC38-203ENST00000546803 LINC00311Q8N616 119 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms