RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ELSPBP1Q96BH3 223 aa11.22□□□□□ -0.61
PTCH1-212ENST00000546744 MIEN1Q9BRT3 115 aa11.22□□□□□ -0.61
PTCH1-212ENST00000546744 SARGQ9BW04 601 aa11.22□□□□□ -0.61
PTCH1-212ENST00000546744 F8VVB4 439 aa11.21□□□□□ -0.61
PTCH1-212ENST00000546744 F8VWA3 439 aa11.21□□□□□ -0.61
PTCH1-212ENST00000546744 UPK3AO75631 287 aa11.21□□□□□ -0.61
PTCH1-212ENST00000546744 GPR3P46089 330 aa11.21□□□□□ -0.61
PTCH1-212ENST00000546744 FAM219BQ5XKK7 198 aa11.21□□□□□ -0.61
PTCH1-212ENST00000546744 PQLC2Q6ZP29 291 aa11.21□□□□□ -0.61
PTCH1-212ENST00000546744 MRPS18BQ9Y676 258 aaKnown RBP11.21□□□□□ -0.61
PTCH1-212ENST00000546744 TNFSF14O43557 240 aa11.21□□□□□ -0.61
PTCH1-212ENST00000546744 CXCL13O43927 109 aa11.21□□□□□ -0.61
PTCH1-212ENST00000546744 CD160O95971 181 aa11.21□□□□□ -0.61
PTCH1-212ENST00000546744 ACTL6AO96019 429 aa11.21□□□□□ -0.61
PTCH1-212ENST00000546744 BGLAPP02818 100 aa11.21□□□□□ -0.61
PTCH1-212ENST00000546744 MENTQ9BUN1 341 aa11.21□□□□□ -0.61
PTCH1-212ENST00000546744 OR6C3Q9NZP0 311 aa11.21□□□□□ -0.61
PTCH1-212ENST00000546744 SDK1Q7Z5N4 2213 aa11.21□□□□□ -0.61
PTCH1-212ENST00000546744 RALGAPA2Q2PPJ7 1873 aa11.21□□□□□ -0.61
PTCH1-212ENST00000546744 FHITP49789 147 aa11.21□□□□□ -0.62
PTCH1-212ENST00000546744 RPS16P62249 146 aaKnown RBP11.21□□□□□ -0.62
PTCH1-212ENST00000546744 AESQ08117 197 aa11.21□□□□□ -0.62
PTCH1-212ENST00000546744 TEPPQ6URK8 271 aa11.21□□□□□ -0.62
PTCH1-212ENST00000546744 ATRAIDQ6UW56 229 aa11.21□□□□□ -0.62
PTCH1-212ENST00000546744 ZNF547Q8IVP9 402 aa11.21□□□□□ -0.62
PTCH1-212ENST00000546744 OR10X1Q8NGY0 326 aa11.21□□□□□ -0.62
PTCH1-212ENST00000546744 CCDC88CQ9P219 2028 aa11.21□□□□□ -0.62
PTCH1-212ENST00000546744 A0A1B0GTI1 187 aa11.21□□□□□ -0.62
PTCH1-212ENST00000546744 PRSS1P07477 247 aa11.21□□□□□ -0.62
PTCH1-212ENST00000546744 CDAP32320 146 aa11.21□□□□□ -0.62
PTCH1-212ENST00000546744 DNAJC4Q9NNZ3 241 aa11.21□□□□□ -0.62
PTCH1-212ENST00000546744 PRNDQ9UKY0 176 aa11.21□□□□□ -0.62
PTCH1-212ENST00000546744 PIN1P1O15428 100 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 CA3P07451 260 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 HINT1P49773 126 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-212ENST00000546744 WDR25Q64LD2 544 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-212ENST00000546744 WDR74Q6RFH5 385 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-212ENST00000546744 ZCCHC14Q8WYQ9 949 aaKnown RBP11.2□□□□□ -0.62
PTCH1-212ENST00000546744 TAF15Q92804 592 aaKnown RBP eCLIP11.2□□□□□ -0.62
PTCH1-212ENST00000546744 TMEM45BQ96B21 275 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 DUSP13Q9UII6 198 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 SPAG17Q6Q759 2223 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 SPINK4O60575 86 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 HLA-DRB1P01911 266 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 FCGR3AP08637 254 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 FAM157CP0CG43 387 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 PSG5Q15238 335 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 CDKN3Q16667 212 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 C19orf24Q9BVV8 132 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 ZNF665Q9H7R5 613 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 TMEM242Q9NWH2 141 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 CLDN16Q9Y5I7 305 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 AUP1Q9Y679 476 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 RNF222A6NCQ9 220 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 PMELP40967 661 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 NIT1Q86X76 327 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 DOLPP1Q86YN1 238 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 NFAM1Q8NET5 270 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-212ENST00000546744 OR10S1Q8NGN2 331 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 SFXN3Q9BWM7 321 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 MRPL18Q9H0U6 180 aaKnown RBP11.2□□□□□ -0.62
PTCH1-212ENST00000546744 SH3BGRL2Q9UJC5 107 aa11.2□□□□□ -0.62
PTCH1-212ENST00000546744 A0A0G2JK05 382 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 NDUFA2O43678 99 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 CLEC3BP05452 202 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 ASAH2BP0C7U1 165 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 PPP1CCP36873 323 aaKnown RBP11.19□□□□□ -0.62
PTCH1-212ENST00000546744 ATP5IP56385 69 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-212ENST00000546744 TMEM240Q5SV17 173 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 MRPL54Q6P161 138 aaKnown RBP11.19□□□□□ -0.62
PTCH1-212ENST00000546744 TMEM116Q8NCL8 245 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 OR2I1PQ8NGU4 316 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 C2orf88Q9BSF0 95 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 PARLQ9H300 379 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 MMP17Q9ULZ9 603 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 OR2W5A6NFC9 320 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 OOEPA6NGQ2 149 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 LAMTOR5O43504 91 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 FCGR3BO75015 233 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 SMIM17P0DL12 118 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 HOXB3P14651 431 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-212ENST00000546744 ZNF708P17019 499 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 GCSHP23434 173 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 MPZP25189 248 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 GABRA6Q16445 453 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 TSPO2Q5TGU0 170 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 OR1L1Q8NH94 360 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 HEXA-AS1Q9H8Q6 139 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 SEBOXQ9HB31 216 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-212ENST00000546744 NPVFQ9HCQ7 196 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 NPIPB13A6NJU9 1138 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 LIPT2A6NK58 231 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 NPIPB4C9JG80 1138 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 DXOO77932 396 aaKnown RBP11.19□□□□□ -0.62
PTCH1-212ENST00000546744 LEPROTL1O95214 131 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 HPRT1P00492 218 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 COL8A1P27658 744 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 MFAP2P55001 183 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 DMRTA1Q5VZB9 504 aa11.19□□□□□ -0.62
PTCH1-212ENST00000546744 OR5AS1Q8N127 324 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms