RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 TMEM235A6NFC5 223 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 TUBAL3A6NHL2 446 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 C17orf100A8MU93 164 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 E7EQL1 145 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 H0YL77 283 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 TRAPPC2LH3BP13 241 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 IFNL4K9M1U5 179 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 SLC31A2O15432 143 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 PDCD6O75340 191 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 NAPSAO96009 420 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 CYB5AP00167 134 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 IGHV1-46P01743 117 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 FCER2P06734 321 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 BCL3P20749 454 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 S100PP25815 95 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 NPBWR2P48146 333 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 VEGFCP49767 419 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 PPOXP50336 477 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 FABP6P51161 128 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 SLAQ13239 276 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 ZNF672Q499Z4 452 aaPredicted RBP7.07□□□□□ -1.28
VPS29-203ENST00000546588 DMRTC1Q5HYR2 192 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 GDPD3Q7L5L3 318 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 NRARPQ7Z6K4 114 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 IZUMO1Q8IYV9 350 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 FBXL14Q8N1E6 418 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 POC5Q8NA72 575 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 CHST4Q8NCG5 386 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 OR10AD1Q8NGE0 317 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 EMG1Q92979 244 aaKnown RBP7.07□□□□□ -1.28
VPS29-203ENST00000546588 ZNF479Q96JC4 524 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 MARVELD1Q9BSK0 173 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 CHST6Q9GZX3 395 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 SLC25A32Q9H2D1 315 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 BANF2Q9H503 90 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 KLK11Q9UBX7 282 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 ING4Q9UNL4 249 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 ST3GAL6Q9Y274 331 aa7.07□□□□□ -1.28
VPS29-203ENST00000546588 PLSCR5A0PG75 271 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 F5H5P2 479 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 F8VVB4 439 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 F8VWA3 439 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.06□□□□□ -1.28
VPS29-203ENST00000546588 GEMIN2O14893 280 aaKnown RBP7.06□□□□□ -1.28
VPS29-203ENST00000546588 HSPA12AO43301 675 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 KCNAB3O43448 404 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 ZG16O60844 167 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 IFNA6P05013 189 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 CSN2P05814 226 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 GNB3P16520 340 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 FUT3P21217 361 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 BLVRBP30043 206 aaPredicted RBP7.06□□□□□ -1.28
VPS29-203ENST00000546588 MDH2P40926 338 aaKnown RBP7.06□□□□□ -1.28
VPS29-203ENST00000546588 SRP9P49458 86 aaKnown RBP7.06□□□□□ -1.28
VPS29-203ENST00000546588 RAB13P51153 203 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 TAS2R19P59542 299 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 IGFBP7Q16270 282 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 PIGYQ3MUY2 71 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 CDNFQ49AH0 187 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 ACTBL2Q562R1 376 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 VAX1Q5SQQ9 334 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 C11orf71Q6IPW1 123 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 Q6P435 159 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 ZNF880Q6PDB4 577 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 SSX9Q7RTT3 188 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 DTX2Q86UW9 622 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 HOGA1Q86XE5 327 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 FAM58AQ8N1B3 248 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 OR10K1Q8NGX5 313 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 ZNF596Q8TC21 504 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 ST8SIA2Q92186 375 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 SNAPC3Q92966 411 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 SLAMF9Q96A28 289 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 CREB3L1Q96BA8 519 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 ELMOD3Q96FG2 381 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 ARHGAP5-AS1Q96IT6 56 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 ZNF251Q9BRH9 671 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 PARD6GQ9BYG4 376 aaPredicted RBP7.06□□□□□ -1.28
VPS29-203ENST00000546588 KRTAP9-8Q9BYQ0 159 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 VCX2Q9H322 139 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 GAL3ST2Q9H3Q3 398 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 MSL2Q9HCI7 577 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 TMEM160Q9NX00 188 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 FAM30AQ9NZY2 134 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 LPAR3Q9UBY5 353 aa7.06□□□□□ -1.28
VPS29-203ENST00000546588 UBR5O95071 2799 aaPredicted RBP7.06□□□□□ -1.28
VPS29-203ENST00000546588 HRNRQ86YZ3 2850 aaPredicted RBP7.06□□□□□ -1.28
VPS29-203ENST00000546588 CENPXA8MT69 81 aa7.05□□□□□ -1.28
VPS29-203ENST00000546588 CDIPTO14735 213 aa7.05□□□□□ -1.28
VPS29-203ENST00000546588 SSX4O60224 188 aa7.05□□□□□ -1.28
VPS29-203ENST00000546588 TGFAP01135 160 aa7.05□□□□□ -1.28
VPS29-203ENST00000546588 OR4A8P0C604 315 aa7.05□□□□□ -1.28
VPS29-203ENST00000546588 AKAIN1P0CW23 69 aa7.05□□□□□ -1.28
VPS29-203ENST00000546588 RNF224P0DH78 156 aa7.05□□□□□ -1.28
VPS29-203ENST00000546588 PTHLHP12272 177 aa7.05□□□□□ -1.28
VPS29-203ENST00000546588 FAUP35544 74 aaKnown RBP7.05□□□□□ -1.28
VPS29-203ENST00000546588 KCNJ3P48549 501 aa7.05□□□□□ -1.28
VPS29-203ENST00000546588 MEOX2P50222 304 aa7.05□□□□□ -1.28
VPS29-203ENST00000546588 ZNF134P52741 427 aa7.05□□□□□ -1.28
VPS29-203ENST00000546588 MEF2DQ14814 521 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms