RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 IGHV7-81A0A0B4J1V7 117 aa9.78□□□□□ -0.84
SCAF11-208ENST00000546534 RBMY1BA6NDE4 496 aaKnown RBP9.78□□□□□ -0.84
SCAF11-208ENST00000546534 RBMY1EA6NEQ0 496 aaKnown RBP9.78□□□□□ -0.84
SCAF11-208ENST00000546534 SLC31A2O15432 143 aa9.78□□□□□ -0.84
SCAF11-208ENST00000546534 ISG15P05161 165 aa9.78□□□□□ -0.84
SCAF11-208ENST00000546534 LGALS1P09382 135 aaKnown RBP9.78□□□□□ -0.84
SCAF11-208ENST00000546534 RBMY1DP0C7P1 496 aaKnown RBP9.78□□□□□ -0.84
SCAF11-208ENST00000546534 ARSBP15848 533 aa9.78□□□□□ -0.84
SCAF11-208ENST00000546534 EPHA2P29317 976 aa9.78□□□□□ -0.84
SCAF11-208ENST00000546534 KCNJ3P48549 501 aa9.78□□□□□ -0.84
SCAF11-208ENST00000546534 ZNF85Q03923 595 aa9.78□□□□□ -0.84
SCAF11-208ENST00000546534 KISS1Q15726 138 aa9.78□□□□□ -0.84
SCAF11-208ENST00000546534 ZSCAN26Q16670 478 aa9.78□□□□□ -0.84
SCAF11-208ENST00000546534 C12orf73Q69YU5 71 aa9.78□□□□□ -0.84
SCAF11-208ENST00000546534 FAHD1Q6P587 224 aa9.78□□□□□ -0.84
SCAF11-208ENST00000546534 FAM220AQ7Z4H9 259 aa9.78□□□□□ -0.84
SCAF11-208ENST00000546534 OR13C3Q8NGS6 347 aa9.78□□□□□ -0.84
SCAF11-208ENST00000546534 CASTOR1Q8WTX7 329 aa9.78□□□□□ -0.84
SCAF11-208ENST00000546534 ARL11Q969Q4 196 aa9.78□□□□□ -0.84
SCAF11-208ENST00000546534 ASB9Q96DX5 294 aa9.78□□□□□ -0.84
SCAF11-208ENST00000546534 GFOD1Q9NXC2 390 aa9.78□□□□□ -0.84
SCAF11-208ENST00000546534 MRPS28Q9Y2Q9 187 aaKnown RBP9.78□□□□□ -0.84
SCAF11-208ENST00000546534 HERC2O95714 4834 aa9.78□□□□□ -0.84
SCAF11-208ENST00000546534 PLECQ15149 4684 aaKnown RBP9.77□□□□□ -0.85
SCAF11-208ENST00000546534 ZAR1LA6NP61 321 aa9.77□□□□□ -0.85
SCAF11-208ENST00000546534 TXNL1O43396 289 aa9.77□□□□□ -0.85
SCAF11-208ENST00000546534 SOX15O60248 233 aa9.77□□□□□ -0.85
SCAF11-208ENST00000546534 MITFO75030 526 aaPredicted RBP9.77□□□□□ -0.85
SCAF11-208ENST00000546534 IGLV1-51P01701 117 aa9.77□□□□□ -0.85
SCAF11-208ENST00000546534 HLA-DRB1P01911 266 aa9.77□□□□□ -0.85
SCAF11-208ENST00000546534 BLVRBP30043 206 aaPredicted RBP9.77□□□□□ -0.85
SCAF11-208ENST00000546534 NANOS3P60323 173 aaKnown RBP9.77□□□□□ -0.85
SCAF11-208ENST00000546534 IL13RA2Q14627 380 aa9.77□□□□□ -0.85
SCAF11-208ENST00000546534 PIGYQ3MUY2 71 aa9.77□□□□□ -0.85
SCAF11-208ENST00000546534 ZNF691Q5VV52 312 aa9.77□□□□□ -0.85
SCAF11-208ENST00000546534 SLC25A48Q6ZT89 311 aaKnown RBP9.77□□□□□ -0.85
SCAF11-208ENST00000546534 SUMF2Q8NBJ7 301 aa9.77□□□□□ -0.85
SCAF11-208ENST00000546534 WDR89Q96FK6 387 aaPredicted RBP9.77□□□□□ -0.85
SCAF11-208ENST00000546534 RITA1Q96K30 269 aa9.77□□□□□ -0.85
SCAF11-208ENST00000546534 DPCDQ9BVM2 203 aaPredicted RBP9.77□□□□□ -0.85
SCAF11-208ENST00000546534 RETNQ9HD89 108 aa9.77□□□□□ -0.85
SCAF11-208ENST00000546534 STUB1Q9UNE7 303 aa9.77□□□□□ -0.85
SCAF11-208ENST00000546534 FAM107AO95990 144 aa9.76□□□□□ -0.85
SCAF11-208ENST00000546534 CNTFRP26992 372 aa9.76□□□□□ -0.85
SCAF11-208ENST00000546534 ATP6V1E1P36543 226 aa9.76□□□□□ -0.85
SCAF11-208ENST00000546534 ZNF134P52741 427 aa9.76□□□□□ -0.85
SCAF11-208ENST00000546534 ZNF137PP52743 207 aa9.76□□□□□ -0.85
SCAF11-208ENST00000546534 LSAMPQ13449 338 aa9.76□□□□□ -0.85
SCAF11-208ENST00000546534 C19orf54Q5BKX5 351 aa9.76□□□□□ -0.85
SCAF11-208ENST00000546534 ANKRD13BQ86YJ7 626 aa9.76□□□□□ -0.85
SCAF11-208ENST00000546534 ZNF439Q8NDP4 499 aa9.76□□□□□ -0.85
SCAF11-208ENST00000546534 PXT1Q8NFP0 134 aa9.76□□□□□ -0.85
SCAF11-208ENST00000546534 OR10K1Q8NGX5 313 aa9.76□□□□□ -0.85
SCAF11-208ENST00000546534 ELOVL1Q9BW60 279 aa9.76□□□□□ -0.85
SCAF11-208ENST00000546534 ANKRD60Q9BZ19 345 aa9.76□□□□□ -0.85
SCAF11-208ENST00000546534 ZNF446Q9NWS9 450 aa9.76□□□□□ -0.85
SCAF11-208ENST00000546534 A0A1W2PN81 502 aa9.75□□□□□ -0.85
SCAF11-208ENST00000546534 TMEM30CPA0ZSE6 113 aa9.75□□□□□ -0.85
SCAF11-208ENST00000546534 AQP12BA6NM10 295 aa9.75□□□□□ -0.85
SCAF11-208ENST00000546534 C12orf77C9JDV5 145 aa9.75□□□□□ -0.85
SCAF11-208ENST00000546534 SULT1B1O43704 296 aa9.75□□□□□ -0.85
SCAF11-208ENST00000546534 IGHV3-11P01762 117 aa9.75□□□□□ -0.85
SCAF11-208ENST00000546534 HSPB1P04792 205 aaKnown RBP9.75□□□□□ -0.85
SCAF11-208ENST00000546534 CHRNA7P36544 502 aa9.75□□□□□ -0.85
SCAF11-208ENST00000546534 ACTBP60709 375 aa9.75□□□□□ -0.85
SCAF11-208ENST00000546534 ECSCRQ19T08 205 aa9.75□□□□□ -0.85
SCAF11-208ENST00000546534 Q3ZCU0 254 aa9.75□□□□□ -0.85
SCAF11-208ENST00000546534 CT45A1Q5HYN5 189 aa9.75□□□□□ -0.85
SCAF11-208ENST00000546534 LPCAT4Q643R3 524 aa9.75□□□□□ -0.85
SCAF11-208ENST00000546534 AQP12AQ8IXF9 295 aa9.75□□□□□ -0.85
SCAF11-208ENST00000546534 CT45A3Q8NHU0 189 aa9.75□□□□□ -0.85
SCAF11-208ENST00000546534 CCDC107Q8WV48 283 aa9.75□□□□□ -0.85
SCAF11-208ENST00000546534 FLYWCH2Q96CP2 140 aaKnown RBP9.75□□□□□ -0.85
SCAF11-208ENST00000546534 FAM110AQ9BQ89 295 aa9.75□□□□□ -0.85
SCAF11-208ENST00000546534 TUBA4BQ9H853 241 aa9.75□□□□□ -0.85
SCAF11-208ENST00000546534 FBXO7Q9Y3I1 522 aa9.75□□□□□ -0.85
SCAF11-208ENST00000546534 PCLOQ9Y6V0 5065 aa9.75□□□□□ -0.85
SCAF11-208ENST00000546534 LANCL1O43813 399 aa9.74□□□□□ -0.85
SCAF11-208ENST00000546534 ORC5O43913 435 aa9.74□□□□□ -0.85
SCAF11-208ENST00000546534 FKBP6O75344 327 aa9.74□□□□□ -0.85
SCAF11-208ENST00000546534 DCTN3O75935 186 aa9.74□□□□□ -0.85
SCAF11-208ENST00000546534 HOXB6P17509 224 aaKnown RBP9.74□□□□□ -0.85
SCAF11-208ENST00000546534 CCR9P51686 369 aa9.74□□□□□ -0.85
SCAF11-208ENST00000546534 NDPQ00604 133 aa9.74□□□□□ -0.85
SCAF11-208ENST00000546534 C5orf64Q2M2E5 130 aa9.74□□□□□ -0.85
SCAF11-208ENST00000546534 HSP90B2PQ58FF3 399 aa9.74□□□□□ -0.85
SCAF11-208ENST00000546534 LIN54Q6MZP7 749 aa9.74□□□□□ -0.85
SCAF11-208ENST00000546534 OR5D14Q8NGL3 314 aa9.74□□□□□ -0.85
SCAF11-208ENST00000546534 TNFAIP8L1Q8WVP5 186 aa9.74□□□□□ -0.85
SCAF11-208ENST00000546534 LINC00476Q8WZB0 136 aa9.74□□□□□ -0.85
SCAF11-208ENST00000546534 NRBF2Q96F24 287 aa9.74□□□□□ -0.85
SCAF11-208ENST00000546534 RHOVQ96L33 236 aa9.74□□□□□ -0.85
SCAF11-208ENST00000546534 ZNF251Q9BRH9 671 aa9.74□□□□□ -0.85
SCAF11-208ENST00000546534 TMED9Q9BVK6 235 aa9.74□□□□□ -0.85
SCAF11-208ENST00000546534 HIPK2Q9H2X6 1198 aa9.74□□□□□ -0.85
SCAF11-208ENST00000546534 FOXA2Q9Y261 457 aaPredicted RBP9.74□□□□□ -0.85
SCAF11-208ENST00000546534 ARL2BPQ9Y2Y0 163 aa9.74□□□□□ -0.85
SCAF11-208ENST00000546534 TNCP24821 2201 aa9.73□□□□□ -0.85
SCAF11-208ENST00000546534 OR4C45A6NMZ5 311 aa9.73□□□□□ -0.85
SCAF11-208ENST00000546534 GABRPO00591 440 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms