RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 PEX16Q9Y5Y5 336 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 LINC00312Q9Y6C7 94 aa5.2□□□□□ -1.58
PRKDC-211ENST00000546304 MEIKINA0A087WXM9 373 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 TRGV10A0A0A0MS01 117 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 TRAV40A0A0B4J280 105 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 KIR2DS1A0A191URI9 304 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 A0A1W2PPH5 198 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 MCRIP1C9JLW8 97 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 M0R1W7 72 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 RAB27BO00194 218 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 MFNGO00587 321 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 SOCS1O15524 211 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 CA11O75493 328 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 CLPXO76031 633 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 RBP4P02753 201 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 GLAP06280 429 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 MMP9P14780 707 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 HIST1H1DP16402 221 aaKnown RBP5.19□□□□□ -1.58
PRKDC-211ENST00000546304 CCL3L1P16619 93 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 ZNF182P17025 639 aaPredicted RBP5.19□□□□□ -1.58
PRKDC-211ENST00000546304 HNF1AP20823 631 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 GLIPR1P48060 266 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 MOGAT2Q3SYC2 334 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 PLAC9Q5JTB6 97 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 SLC35E4Q6ICL7 350 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 FAHD2BQ6P2I3 314 aaPredicted RBP5.19□□□□□ -1.58
PRKDC-211ENST00000546304 ZNF497Q6ZNH5 498 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 Q6ZSN1 163 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 Q71RC1 249 aaPredicted RBP5.19□□□□□ -1.58
PRKDC-211ENST00000546304 MOB1BQ7L9L4 216 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 GAPTQ8N292 157 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 OR5AN1Q8NGI8 311 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 OR10R2Q8NGX6 335 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 ACOT12Q8WYK0 555 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 RAB3CQ96E17 227 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 FAHD2AQ96GK7 314 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 ARHGAP5-AS1Q96IT6 56 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 ZNF714Q96N38 554 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 WDFY2Q96P53 400 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 SIRPDQ9H106 197 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 ATG5Q9H1Y0 275 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 GAL3ST2Q9H3Q3 398 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 TMPRSS5Q9H3S3 457 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 PLEKHJ1Q9NW61 149 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 OR6C3Q9NZP0 311 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 COMMD3Q9UBI1 195 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 OPN4Q9UHM6 478 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 HSF4Q9ULV5 492 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 UBE2J1Q9Y385 318 aaPredicted RBP5.19□□□□□ -1.58
PRKDC-211ENST00000546304 KPTNQ9Y664 436 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 AUP1Q9Y679 476 aa5.19□□□□□ -1.58
PRKDC-211ENST00000546304 A0A075B6Q4 140 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 A0A0A6YYH2 397 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 UBE2QL1A1L167 161 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 DPPA5A6NC42 116 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 TMEM235A6NFC5 223 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 A6NJ64 397 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 SERPINE3A8MV23 424 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 INAFM1C9JVW0 142 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 TOX4O94842 621 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 NAPSAO96009 420 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 APOA1P02647 267 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 EIF4EP06730 217 aaKnown RBP5.18□□□□□ -1.58
PRKDC-211ENST00000546304 ZNF728P0DKX0 622 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 GNB3P16520 340 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 CDK2P24941 298 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 SSTR5P35346 364 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 DLX6P56179 175 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 ARF6P62330 175 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 PAX8Q06710 450 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 ARL6IP1Q15041 203 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 TMEM69Q5SWH9 247 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 FAM120AOSQ5T036 256 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 C6orf183Q5T699 404 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 PRAMEF5Q5TYX0 476 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 OLFML2AQ68BL7 652 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 MZT2AQ6P582 158 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 ZNF782Q6ZMW2 699 aaPredicted RBP5.18□□□□□ -1.58
PRKDC-211ENST00000546304 IL17RELQ6ZVW7 336 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 VMO1Q7Z5L0 202 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 TEX29Q8N6K0 151 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 OR13A1Q8NGR1 328 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 MRPL30Q8TCC3 161 aaKnown RBP5.18□□□□□ -1.58
PRKDC-211ENST00000546304 MRGPRDQ8TDS7 321 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 PHF21AQ96BD5 680 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 UPRTQ96BW1 309 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 TBX15Q96SF7 602 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 HDHD3Q9BSH5 251 aaPredicted RBP5.18□□□□□ -1.58
PRKDC-211ENST00000546304 PCGF1Q9BSM1 259 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 PECRQ9BY49 303 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 SLIRPQ9GZT3 109 aaKnown RBP5.18□□□□□ -1.58
PRKDC-211ENST00000546304 C6orf62Q9GZU0 229 aaPredicted RBP5.18□□□□□ -1.58
PRKDC-211ENST00000546304 ABCG5Q9H222 651 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 NCOR1P1Q9H4R4 102 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 METTL8Q9H825 291 aaKnown RBP5.18□□□□□ -1.58
PRKDC-211ENST00000546304 UNKLQ9H9P5 680 aaKnown RBP5.18□□□□□ -1.58
PRKDC-211ENST00000546304 ZMAT3Q9HA38 289 aaKnown RBP5.18□□□□□ -1.58
PRKDC-211ENST00000546304 CHMP1AQ9HD42 196 aaPredicted RBP5.18□□□□□ -1.58
PRKDC-211ENST00000546304 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.18□□□□□ -1.58
PRKDC-211ENST00000546304 SIRT7Q9NRC8 400 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms