RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 ZNF554Q86TJ5 538 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 TMEM219Q86XT9 240 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 WIPF2Q8TF74 440 aaPredicted RBP9.15□□□□□ -0.94
YBX3-216ENST00000544622 CCDC107Q8WV48 283 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 ARL11Q969Q4 196 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 NICN1Q9BSH3 213 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 NPFFR1Q9GZQ6 430 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 LPAR5Q9H1C0 372 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 KCNK15Q9H427 330 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 Q9H521 79 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 SERTAD4Q9NUC0 356 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 SIGLEC9Q9Y336 463 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 TRAV1-2A0A0B4J238 106 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 TRDV1A0A1B0GX56 115 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 IGHV3-7P01780 117 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 AMY1AP04745 511 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 AMY2AP04746 511 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 ARSBP15848 533 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 CD24P25063 80 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 BRS3P32247 399 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 PSMD7P51665 324 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 TMEM50BP56557 158 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 HABP2Q14520 560 aaPredicted RBP9.14□□□□□ -0.95
YBX3-216ENST00000544622 LTC4SQ16873 150 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 CCDC144NLQ6NUI1 221 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 Q6ZPA2 131 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 C16orf82Q7Z2V1 217 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 OR2W3Q7Z3T1 314 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 THNSL2Q86YJ6 484 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 DTX3Q8N9I9 347 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 ZNF439Q8NDP4 499 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 OR4C13Q8NGP0 309 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 OR4K15Q8NH41 348 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 MRPL30Q8TCC3 161 aaKnown RBP9.14□□□□□ -0.95
YBX3-216ENST00000544622 NEK7Q8TDX7 302 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 CFHR4Q92496 578 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 ST6GALNAC6Q969X2 333 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 SULT4A1Q9BR01 284 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 OCSTAMPQ9BR26 566 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 TMEM59Q9BXS4 323 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 WNT10AQ9GZT5 417 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 GFOD1Q9NXC2 390 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 TRAPPC2LQ9UL33 140 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 V9GY05 133 aa9.14□□□□□ -0.95
YBX3-216ENST00000544622 A0A1W2PPI3 338 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 UBE2QL1A1L167 161 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 CCRL2O00421 344 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 NAPSAO96009 420 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 FGF9P31371 208 aaPredicted RBP9.13□□□□□ -0.95
YBX3-216ENST00000544622 MADCAM1Q13477 382 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 EBI3Q14213 229 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 TMEM30BQ3MIR4 351 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 C6orf183Q5T699 404 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 STEAP3Q658P3 488 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 ZNF880Q6PDB4 577 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 TRAT1Q6PIZ9 186 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 C6orf201Q7Z4U5 140 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 NR2C2APQ86WQ0 139 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 SVOPQ8N4V2 548 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 OR51D1Q8NGF3 324 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 OR2T6Q8NHC8 308 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 UBALD1Q8TB05 177 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 RBM14Q96PK6 669 aaKnown RBP9.13□□□□□ -0.95
YBX3-216ENST00000544622 FAAP24Q9BTP7 215 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 LIN7BQ9HAP6 207 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 HSF4Q9ULV5 492 aa9.13□□□□□ -0.95
YBX3-216ENST00000544622 AMMECR1Q9Y4X0 333 aaPredicted RBP9.13□□□□□ -0.95
YBX3-216ENST00000544622 TRBV6-6A0A0A6YYG2 114 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 A0A1W2PPE3 182 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 SDCBPO00560 298 aaPredicted RBP9.12□□□□□ -0.95
YBX3-216ENST00000544622 SOCS1O15524 211 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 OR2F2O95006 317 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 HBZP02008 142 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 BLVRBP30043 206 aaPredicted RBP9.12□□□□□ -0.95
YBX3-216ENST00000544622 MNDAP41218 407 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 GNG10P50151 68 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 RAB7AP51149 207 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 ARHGDIBP52566 201 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 ZNF137PP52743 207 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 CLDN12P56749 244 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 HTD2P86397 168 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 ZNF816Q0VGE8 651 aaPredicted RBP9.12□□□□□ -0.95
YBX3-216ENST00000544622 P2RY14Q15391 338 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 C2orf76Q3KRA6 126 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 CT45A1Q5HYN5 189 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 LY6G6FQ5SQ64 297 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 ZNF773Q6PK81 442 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 SLC25A48Q6ZT89 311 aaKnown RBP9.12□□□□□ -0.95
YBX3-216ENST00000544622 C5orf24Q7Z6I8 188 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 OR1L1Q8NH94 360 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 CT45A3Q8NHU0 189 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 FCGR1BQ92637 280 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 RPEQ96AT9 228 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 FAM3DQ96BQ1 224 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 NEDD4LQ96PU5 975 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 PRSS22Q9GZN4 317 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 PLGRKTQ9HBL7 147 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 TAF9BQ9HBM6 251 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 STEAP1Q9UHE8 339 aa9.12□□□□□ -0.95
YBX3-216ENST00000544622 WNK1Q9H4A3 2382 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms