RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 TMEM133Q9H2Q1 129 aa11.84□□□□□ -0.51
TNFRSF1A-216ENST00000543995 AUNIPQ9H7T9 357 aa11.84□□□□□ -0.51
TNFRSF1A-216ENST00000543995 Q9N2K0 584 aa11.84□□□□□ -0.51
TNFRSF1A-216ENST00000543995 MGAT4AQ9UM21 535 aa11.84□□□□□ -0.51
TNFRSF1A-216ENST00000543995 TLN2Q9Y4G6 2542 aa11.84□□□□□ -0.51
TNFRSF1A-216ENST00000543995 IGHV1-69DA0A0B4J2H0 117 aa11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 POM121CA8CG34 1229 aa11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 SDCBPO00560 298 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 IGHV1-69P01742 117 aa11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 PTHLHP12272 177 aa11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 FPR2P25090 351 aa11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 RUSC1-AS1Q66K80 236 aa11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 BAIAP2L2Q6UXY1 529 aa11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 BRD3OSQ6XYD6 125 aa11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 Q6ZPA2 131 aa11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 ZNF554Q86TJ5 538 aa11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 OR10A7Q8NGE5 316 aa11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 OR1L1Q8NH94 360 aa11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 GALMQ96C23 342 aa11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 ST6GALNAC5Q9BVH7 336 aa11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 MS4A7Q9GZW8 240 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 NXF2Q9GZY0 626 aaKnown RBP11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 MIXL1Q9H2W2 232 aa11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 MMP27Q9H306 513 aa11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 LINC00574Q9H8X3 128 aa11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 ZNF230Q9UIE0 474 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-216ENST00000543995 IGHV3-43A0A0B4J1X8 118 aa11.82□□□□□ -0.52
TNFRSF1A-216ENST00000543995 CRLF1O75462 422 aa11.82□□□□□ -0.52
TNFRSF1A-216ENST00000543995 FSHBP01225 129 aa11.82□□□□□ -0.52
TNFRSF1A-216ENST00000543995 MELTFP08582 738 aa11.82□□□□□ -0.52
TNFRSF1A-216ENST00000543995 IGHV3-43DP0DP04 118 aa11.82□□□□□ -0.52
TNFRSF1A-216ENST00000543995 DTYMKP23919 212 aa11.82□□□□□ -0.52
TNFRSF1A-216ENST00000543995 S100A5P33763 92 aa11.82□□□□□ -0.52
TNFRSF1A-216ENST00000543995 UBE2E1P51965 193 aa11.82□□□□□ -0.52
TNFRSF1A-216ENST00000543995 HLA-DRB3P79483 266 aa11.82□□□□□ -0.52
TNFRSF1A-216ENST00000543995 SCGB2A2Q13296 93 aa11.82□□□□□ -0.52
TNFRSF1A-216ENST00000543995 HMGN3Q15651 99 aa11.82□□□□□ -0.52
TNFRSF1A-216ENST00000543995 CNIH2Q6PI25 160 aa11.82□□□□□ -0.52
TNFRSF1A-216ENST00000543995 C5orf24Q7Z6I8 188 aa11.82□□□□□ -0.52
TNFRSF1A-216ENST00000543995 IL1F10Q8WWZ1 152 aa11.82□□□□□ -0.52
TNFRSF1A-216ENST00000543995 MAFIPQ8WZ33 124 aa11.82□□□□□ -0.52
TNFRSF1A-216ENST00000543995 DIRAS2Q96HU8 199 aa11.82□□□□□ -0.52
TNFRSF1A-216ENST00000543995 IGHV2-26A0A0B4J1V2 119 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 TRDCB7Z8K6 153 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 F2RL2O00254 374 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 TOR1AO14656 332 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 SSX5O60225 188 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 IGHV3-7P01780 117 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 ARG1P05089 322 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 EPHA1P21709 976 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 BPIFB3P59826 476 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 HCP5Q6MZN7 132 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 SNX29P2Q8IUI4 249 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 LURAP1LQ8IV03 231 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 ABHD12Q8N2K0 398 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 C22orf15Q8WYQ4 148 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 GCDHQ92947 438 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 CLEC7AQ9BXN2 247 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 OR2S2Q9NQN1 319 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 GNG12Q9UBI6 72 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 ZNF69Q9UC07 566 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 MEIOCA2RUB1 952 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 MEIS3P1A6NDR6 274 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 NPFFO15130 113 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 HLA-DQB1P01920 261 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 SCTP09683 121 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 PRSS3P35030 304 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 KIR2DS4P43632 304 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 LGALS4P56470 323 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 KIR2DS1Q14954 304 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 TMEM30BQ3MIR4 351 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 OR52M1Q8NGK5 317 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 LEAP2Q969E1 77 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 ZNF286AQ9HBT8 521 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 IFT46Q9NQC8 304 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 GFOD1Q9NXC2 390 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 A3GALT2U3KPV4 340 aa11.81□□□□□ -0.52
TNFRSF1A-216ENST00000543995 SVEP1Q4LDE5 3571 aa11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 SONP18583 2426 aaKnown RBP11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 ANK3Q12955 4377 aaKnown RBP11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 A0A087X0M5 115 aa11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 A0A1B0GX30 115 aa11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 FABP7O15540 132 aa11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 FAM157CP0CG43 387 aa11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 TNFSF8P32971 234 aa11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 SAA4P35542 130 aa11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 GNG10P50151 68 aa11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 LOXL3P58215 753 aa11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 HTD2P86397 168 aa11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 IL18Q14116 193 aa11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 CNPY1Q3B7I2 92 aa11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 UTF1Q5T230 341 aa11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 BCL6BQ8N143 479 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 OR11H6Q8NGC7 330 aa11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 OR52L2PQ8NGH6 319 aa11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 OR10V1Q8NGI7 309 aa11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 C15orf40Q8WUR7 153 aa11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 SLC23A1Q9UHI7 598 aa11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 JPT1Q9UK76 154 aa11.8□□□□□ -0.52
TNFRSF1A-216ENST00000543995 HSPA12AO43301 675 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms