RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 CD5P06127 495 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 PGA5P0DJD9 388 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 FOSL1P15407 271 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 VDAC1P21796 283 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 EWSR1Q01844 656 aaKnown RBP eCLIP13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 CXorf66Q5JRM2 361 aaPredicted RBP13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 Q8IYB0 196 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 OR2C3Q8N628 320 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 OR5D13Q8NGL4 314 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 OR1J1Q8NGS3 322 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 BCL2L14Q9BZR8 327 aa13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 ERRFI1Q9UJM3 462 aaPredicted RBP13.64□□□□□ -0.23
SCNN1A-221ENST00000543768 TRAV39A0A0B4J263 110 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 FAM24AA6NFZ4 105 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 RNASEK-C17orf49H0YIS7 233 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 SIRPB1O00241 398 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 DANCRP0C864 163 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 F2RP25116 425 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 VWA1Q6PCB0 445 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 ZNF497Q6ZNH5 498 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 CNEP1R1Q8N9A8 125 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 C9orf106Q8NAJ2 232 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 PARP12Q9H0J9 701 aaKnown RBP13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 SEBOXQ9HB31 216 aaPredicted RBP13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 OR1A1Q9P1Q5 309 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 POLDIP2Q9Y2S7 368 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 TRAV17A0A0B4J275 112 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 NPIPB11E5RHQ5 1161 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 H0YL77 283 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 AGPAT2O15120 278 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 GATCO43716 136 aaKnown RBP13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 CNOT4O95628 575 aaKnown RBP13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 OR8U9P0C7N5 309 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 PTAFRP25105 342 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 S100PP25815 95 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 MDH2P40926 338 aaKnown RBP13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 ZNF146Q15072 292 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 OR8U1Q8NH10 309 aa13.63□□□□□ -0.23
SCNN1A-221ENST00000543768 PTPRBP23467 1997 aa13.62□□□□□ -0.23
SCNN1A-221ENST00000543768 IGHV3-64DA0A0J9YX35 117 aa13.62□□□□□ -0.23
SCNN1A-221ENST00000543768 C1orf196B1AJZ1 125 aa13.62□□□□□ -0.23
SCNN1A-221ENST00000543768 IGKV3-15P01624 115 aa13.62□□□□□ -0.23
SCNN1A-221ENST00000543768 CBR1P16152 277 aa13.62□□□□□ -0.23
SCNN1A-221ENST00000543768 COX5AP20674 150 aa13.62□□□□□ -0.23
SCNN1A-221ENST00000543768 MPV17P39210 176 aa13.62□□□□□ -0.23
SCNN1A-221ENST00000543768 ASCL1P50553 236 aa13.62□□□□□ -0.23
SCNN1A-221ENST00000543768 ID3Q02535 119 aa13.62□□□□□ -0.23
SCNN1A-221ENST00000543768 WDR31Q8NA23 367 aa13.62□□□□□ -0.23
SCNN1A-221ENST00000543768 KLF14Q8TD94 323 aaPredicted RBP13.62□□□□□ -0.23
SCNN1A-221ENST00000543768 IL1F10Q8WWZ1 152 aa13.62□□□□□ -0.23
SCNN1A-221ENST00000543768 IL22RA2Q969J5 263 aa13.62□□□□□ -0.23
SCNN1A-221ENST00000543768 ABHD14BQ96IU4 210 aa13.62□□□□□ -0.23
SCNN1A-221ENST00000543768 TCEAL7Q9BRU2 100 aa13.62□□□□□ -0.23
SCNN1A-221ENST00000543768 MAGT1Q9H0U3 335 aa13.62□□□□□ -0.23
SCNN1A-221ENST00000543768 SH3BGRL3Q9H299 93 aa13.62□□□□□ -0.23
SCNN1A-221ENST00000543768 EP300Q09472 2414 aaPredicted RBP13.62□□□□□ -0.23
SCNN1A-221ENST00000543768 IGSF23A1L1A6 192 aa13.61□□□□□ -0.23
SCNN1A-221ENST00000543768 C9JQL5 133 aa13.61□□□□□ -0.23
SCNN1A-221ENST00000543768 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.61□□□□□ -0.23
SCNN1A-221ENST00000543768 AGFG2O95081 481 aa13.61□□□□□ -0.23
SCNN1A-221ENST00000543768 IGLV2-14P01704 120 aa13.61□□□□□ -0.23
SCNN1A-221ENST00000543768 S100A6P06703 90 aa13.61□□□□□ -0.23
SCNN1A-221ENST00000543768 SELEP16581 610 aa13.61□□□□□ -0.23
SCNN1A-221ENST00000543768 PAX6P26367 422 aa13.61□□□□□ -0.23
SCNN1A-221ENST00000543768 EGLN1Q9GZT9 426 aa13.61□□□□□ -0.23
SCNN1A-221ENST00000543768 MIOXQ9UGB7 285 aa13.61□□□□□ -0.23
SCNN1A-221ENST00000543768 PRR14LQ5THK1 2151 aa13.61□□□□□ -0.23
SCNN1A-221ENST00000543768 FAM157AC9JC47 383 aa13.61□□□□□ -0.23
SCNN1A-221ENST00000543768 SSSCA1O60232 199 aa13.61□□□□□ -0.23
SCNN1A-221ENST00000543768 NXPH2O95156 264 aa13.61□□□□□ -0.23
SCNN1A-221ENST00000543768 GTF3C1Q12789 2109 aa13.61□□□□□ -0.23
SCNN1A-221ENST00000543768 EIF2S3LQ2VIR3 472 aaKnown RBP13.61□□□□□ -0.23
SCNN1A-221ENST00000543768 ODF3L1Q8IXM7 274 aa13.61□□□□□ -0.23
SCNN1A-221ENST00000543768 OR10V1Q8NGI7 309 aa13.61□□□□□ -0.23
SCNN1A-221ENST00000543768 CFAP47Q6ZTR5 3102 aa13.61□□□□□ -0.23
SCNN1A-221ENST00000543768 TMEM50AO95807 157 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 GRPP07492 148 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 CD80P33681 288 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 FHITP49789 147 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 FOXF2Q12947 444 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 TESK1Q15569 626 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 OR8G1Q15617 311 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 MOB1BQ7L9L4 216 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 C15orf54Q8N8G6 183 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 HSD17B11Q8NBQ5 300 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 PLEKHF2Q9H8W4 249 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 SMCO4Q9NRQ5 59 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 LYRM2Q9NU23 88 aaPredicted RBP13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 MBNL3Q9NUK0 354 aaKnown RBP13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 CACFD1Q9UGQ2 172 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 CACNA1GO43497 2377 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 ZNF318Q5VUA4 2279 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 A0A0G2JRQ6 117 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 PROB1E7EW31 1015 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 MLNRO43193 412 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 IGHV2-70P01814 119 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 WNT2P09544 360 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 TMEM252Q8N6L7 170 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 OR51H1Q8NH63 302 aa13.6□□□□□ -0.23
SCNN1A-221ENST00000543768 SARAFQ96BY9 339 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms