RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	NIT2	Q9NQR4	276 aa		5.34	□□□□□ -1.55
CIT-213	ENST00000543324	SLC2A8	Q9NY64	477 aa		5.34	□□□□□ -1.55
CIT-213	ENST00000543324	RCC2	Q9P258	522 aa	Known RBP	5.34	□□□□□ -1.55
CIT-213	ENST00000543324	GRHPR	Q9UBQ7	328 aa		5.34	□□□□□ -1.55
CIT-213	ENST00000543324	COA3	Q9Y2R0	106 aa	Predicted RBP	5.34	□□□□□ -1.55
CIT-213	ENST00000543324	STARD10	Q9Y365	291 aa		5.34	□□□□□ -1.55
CIT-213	ENST00000543324	IQCF6	A8MYZ5	107 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	MFNG	O00587	321 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	XKRY	O14609	159 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	RER1	O15258	196 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	MLNR	O43193	412 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	SLC16A7	O60669	478 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	PTBP3	O95758	552 aa	Known RBP	5.33	□□□□□ -1.56
CIT-213	ENST00000543324	ABHD16A	O95870	558 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	MT-ND4L	P03901	98 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	RLN1	P04808	185 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	MRPL3	P09001	348 aa	Known RBP	5.33	□□□□□ -1.56
CIT-213	ENST00000543324	DBH	P09172	617 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	NHLRC4	P0CG21	123 aa	Predicted RBP	5.33	□□□□□ -1.56
CIT-213	ENST00000543324	ANOS1	P23352	680 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	ZBTB25	P24278	435 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	RPL4	P36578	427 aa	Known RBP	5.33	□□□□□ -1.56
CIT-213	ENST00000543324	GATA4	P43694	442 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	HTR5A	P47898	357 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	MMP16	P51512	607 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	CD81	P60033	236 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	SNRPE	P62304	92 aa	Known RBP	5.33	□□□□□ -1.56
CIT-213	ENST00000543324	PCK2	Q16822	640 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324		Q499Y3	187 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	TMEM155	Q4W5P6	130 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	DEFB121	Q5J5C9	76 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	RAB12	Q6IQ22	244 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	SLC18B1	Q6NT16	456 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	FAAP20	Q6NZ36	180 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	STEAP1B	Q6NZ63	245 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	SLC16A13	Q7RTY0	426 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	NAA40	Q86UY6	237 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	SIGLECL1	Q8N7X8	197 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	DEFB108B	Q8NET1	73 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	OR5AP2	Q8NGF4	316 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	OR51S1	Q8NGJ8	323 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	OR10S1	Q8NGN2	331 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	OR1F12	Q8NHA8	337 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	GPR148	Q8TDV2	347 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	NUDCD2	Q8WVJ2	157 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	EDARADD	Q8WWZ3	215 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	RGP1	Q92546	391 aa	Predicted RBP	5.33	□□□□□ -1.56
CIT-213	ENST00000543324	HIST1H2BA	Q96A08	127 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	SMIM8	Q96KF7	97 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	TSSK2	Q96PF2	358 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	MNT	Q99583	582 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	NMNAT2	Q9BZQ4	307 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	NMES1	Q9C002	83 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	TINAGL1	Q9GZM7	467 aa	Predicted RBP	5.33	□□□□□ -1.56
CIT-213	ENST00000543324	TLNRD1	Q9H1K6	362 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	OR51V1	Q9H2C8	321 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	TMPRSS5	Q9H3S3	457 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	TMEM106B	Q9NUM4	274 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	MRPL22	Q9NWU5	206 aa	Known RBP	5.33	□□□□□ -1.56
CIT-213	ENST00000543324	PLEK2	Q9NYT0	353 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	MIOX	Q9UGB7	285 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	IL19	Q9UHD0	177 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	STEAP1	Q9UHE8	339 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	IER3IP1	Q9Y5U9	82 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	KPTN	Q9Y664	436 aa		5.33	□□□□□ -1.56
CIT-213	ENST00000543324	DSCAML1	Q8TD84	2053 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324		A0A0B4J2A0	478 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	C9orf170	A2RU37	121 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	DBX1	A6NMT0	343 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	OR2AT4	A6NND4	320 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	CLDN34	H7C241	214 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	SPRY3	O43610	288 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	FBXO24	O75426	580 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	GPANK1	O95872	356 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	IFNA10	P01566	189 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	CD5	P06127	495 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	ZNF735	P0CB33	412 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	GTF2F2	P13984	249 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	HIST1H1C	P16403	213 aa	Known RBP	5.32	□□□□□ -1.56
CIT-213	ENST00000543324	ADRA2C	P18825	462 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	CCNO	P22674	350 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	CPT2	P23786	658 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	CD34	P28906	385 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	CRABP1	P29762	137 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	PRSS3	P35030	304 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	CAV2	P51636	162 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	PRKX	P51817	358 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	UBE2M	P61081	183 aa	Known RBP	5.32	□□□□□ -1.56
CIT-213	ENST00000543324	EIF5A	P63241	154 aa	Known RBP	5.32	□□□□□ -1.56
CIT-213	ENST00000543324	TNFAIP6	P98066	277 aa	Predicted RBP	5.32	□□□□□ -1.56
CIT-213	ENST00000543324	DHRS2	Q13268	280 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	MEF2D	Q14814	521 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	MEP1B	Q16820	701 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	C4orf46	Q504U0	113 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	ATPAF1	Q5TC12	328 aa	Predicted RBP	5.32	□□□□□ -1.56
CIT-213	ENST00000543324	OTP	Q5XKR4	325 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	FIP1L1	Q6UN15	594 aa	Known RBP	5.32	□□□□□ -1.56
CIT-213	ENST00000543324	RBMS3	Q6XE24	437 aa	Known RBP	5.32	□□□□□ -1.56
CIT-213	ENST00000543324	DOK3	Q7L591	496 aa		5.32	□□□□□ -1.56
CIT-213	ENST00000543324	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	5.32	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms