RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 ALKBH4Q9NXW9 302 aa6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 FBXL17Q9UF56 701 aa6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 METRNQ9UJH8 293 aa6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 FLVCR1Q9Y5Y0 555 aa6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 GPR179Q6PRD1 2367 aa6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 SDK2Q58EX2 2172 aa6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 OR4C45A6NMZ5 311 aa6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 K7EPK0 472 aa6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 MMP7P09237 267 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 ALOX5APP20292 161 aa6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 MDKP21741 143 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 FCGR2CP31995 323 aa6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 SSR4P51571 173 aa6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 SSBP2P81877 361 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 MYBPHQ13203 477 aa6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 OPN5Q6U736 354 aa6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 DPY19L4Q7Z388 723 aa6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 FAM71E2Q8N5Q1 922 aa6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 AQP10Q96PS8 301 aa6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 KLHL13Q9P2N7 655 aa6.91□□□□□ -1.3
PDLIM5-221ENST00000542407 KIR2DL5BA0A0G2JN68 375 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 KIR2DL5BA0A0G2JPC4 375 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 H3BML4 177 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 GEMIN2O14893 280 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 HPRT1P00492 218 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 TCN2P20062 427 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 KLK2P20151 261 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 S100GP29377 79 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 RPL12P30050 165 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 PAX5Q02548 391 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 MDGA2Q7Z553 956 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 MOGAT3Q86VF5 341 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 RPS19BP1Q86WX3 136 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 KIR2DL5AQ8N109 375 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 SLC35G3Q8N808 338 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 ZDHHC22Q8N966 263 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 OTOSQ8NHW6 89 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 FRZBQ92765 325 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 SS18L2Q9UHA2 77 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 IGKV1D-43A0A0B4J1Z2 117 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 TRAV39A0A0B4J263 110 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 PRR33A8MZF0 331 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 ZNF814B7Z6K7 855 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 RAB27BO00194 218 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 SLC33A1O00400 549 aaPredicted RBP6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 XKRYO14609 159 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 SCGB1D1O95968 90 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 MT-CO3P00414 261 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 LIFP15018 202 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 MSR1P21757 451 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 ELOBQ15370 118 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 LRP11Q86VZ4 500 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 OR4P4Q8NGL7 312 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 RAB39BQ96DA2 213 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 GNRHR2Q96P88 292 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 PBDC1Q9BVG4 233 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 TMEM9BQ9NQ34 198 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 TAS2R4Q9NYW5 299 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 ONECUT1Q9UBC0 465 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 CKLFQ9UBR5 152 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 B3GALT5Q9Y2C3 310 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 UBE2J1Q9Y385 318 aaPredicted RBP6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 TMED3Q9Y3Q3 217 aa6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 LSM5Q9Y4Y9 91 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-221ENST00000542407 TRAV30A0A087WSZ9 112 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 TRBV5-7A0A0A0MS05 114 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 TMEM212A6NML5 194 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 K7EQM0 130 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 SLC16A7O60669 478 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 HLA-DQA2P01906 255 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 PET100P0DJ07 73 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 PGA4P0DJD7 388 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 PGA5P0DJD9 388 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 HKR1P10072 659 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 GNB3P16520 340 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 FPR2P25090 351 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 OTX2P32243 289 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 ELLP55199 621 aaPredicted RBP6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 WDR38Q5JTN6 314 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 ASPHD2Q6ICH7 369 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 CCDC144NLQ6NUI1 221 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 DNM1P34Q6PK57 102 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 OR51A2Q8NGJ7 313 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 FAM213BQ8TBF2 198 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 DHDHQ9UQ10 334 aa6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 RCL1Q9Y2P8 373 aaKnown RBP6.9□□□□□ -1.31
PDLIM5-221ENST00000542407 FREM2Q5SZK8 3169 aa6.89□□□□□ -1.31
PDLIM5-221ENST00000542407 EML6Q6ZMW3 1958 aa6.89□□□□□ -1.31
PDLIM5-221ENST00000542407 A0A0G2JMM0 328 aa6.89□□□□□ -1.31
PDLIM5-221ENST00000542407 A0A1W2PPB8 328 aa6.89□□□□□ -1.31
PDLIM5-221ENST00000542407 A0A1W2PRS3 328 aa6.89□□□□□ -1.31
PDLIM5-221ENST00000542407 FIGNL2A6NMB9 653 aa6.89□□□□□ -1.31
PDLIM5-221ENST00000542407 DHRS7CA6NNS2 312 aa6.89□□□□□ -1.31
PDLIM5-221ENST00000542407 KIR3DP1A8MWS1 328 aa6.89□□□□□ -1.31
PDLIM5-221ENST00000542407 H0YL77 283 aa6.89□□□□□ -1.31
PDLIM5-221ENST00000542407 H3BQ15 152 aa6.89□□□□□ -1.31
PDLIM5-221ENST00000542407 TAAR5O14804 337 aa6.89□□□□□ -1.31
PDLIM5-221ENST00000542407 ZIC3O60481 467 aa6.89□□□□□ -1.31
PDLIM5-221ENST00000542407 JTBO76095 146 aa6.89□□□□□ -1.31
PDLIM5-221ENST00000542407 OR4A8P0C604 315 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms