RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 RCC2Q9P258 522 aaKnown RBP16.08■□□□□ 0.16
DDB1-220ENST00000542337 GHRLQ9UBU3 117 aa16.08■□□□□ 0.16
DDB1-220ENST00000542337 IGHV1-3A0A0C4DH29 117 aa16.07■□□□□ 0.16
DDB1-220ENST00000542337 SERPINE3A8MV23 424 aa16.07■□□□□ 0.16
DDB1-220ENST00000542337 GLAP06280 429 aa16.07■□□□□ 0.16
DDB1-220ENST00000542337 MGMTP16455 207 aa16.07■□□□□ 0.16
DDB1-220ENST00000542337 FUT3P21217 361 aa16.07■□□□□ 0.16
DDB1-220ENST00000542337 TCTEX1D4Q5JR98 221 aa16.07■□□□□ 0.16
DDB1-220ENST00000542337 MS4A15Q8N5U1 240 aa16.07■□□□□ 0.16
DDB1-220ENST00000542337 C5orf56Q8N8D9 126 aa16.07■□□□□ 0.16
DDB1-220ENST00000542337 WFDC9Q8NEX5 89 aa16.07■□□□□ 0.16
DDB1-220ENST00000542337 UBALD1Q8TB05 177 aa16.07■□□□□ 0.16
DDB1-220ENST00000542337 MND1Q9BWT6 205 aa16.07■□□□□ 0.16
DDB1-220ENST00000542337 GNG12Q9UBI6 72 aa16.07■□□□□ 0.16
DDB1-220ENST00000542337 IGHV3-43A0A0B4J1X8 118 aa16.06■□□□□ 0.16
DDB1-220ENST00000542337 NCBP2LA6PVI3 153 aaKnown RBP16.06■□□□□ 0.16
DDB1-220ENST00000542337 IGHV3-43DP0DP04 118 aa16.06■□□□□ 0.16
DDB1-220ENST00000542337 REG1BP48304 166 aa16.06■□□□□ 0.16
DDB1-220ENST00000542337 SLC35B1P78383 322 aa16.06■□□□□ 0.16
DDB1-220ENST00000542337 LAIR2Q6ISS4 152 aa16.06■□□□□ 0.16
DDB1-220ENST00000542337 FOXRED2Q8IWF2 684 aa16.06■□□□□ 0.16
DDB1-220ENST00000542337 OR2T10Q8NGZ9 312 aa16.06■□□□□ 0.16
DDB1-220ENST00000542337 OR4K15Q8NH41 348 aa16.06■□□□□ 0.16
DDB1-220ENST00000542337 TFAP2CQ92754 450 aa16.06■□□□□ 0.16
DDB1-220ENST00000542337 CST11Q9H112 138 aa16.06■□□□□ 0.16
DDB1-220ENST00000542337 SCN3BQ9NY72 215 aa16.06■□□□□ 0.16
DDB1-220ENST00000542337 KCNIP1Q9NZI2 227 aa16.06■□□□□ 0.16
DDB1-220ENST00000542337 C12orf77C9JDV5 145 aa16.05■□□□□ 0.16
DDB1-220ENST00000542337 PTGES3LE9PB15 166 aa16.05■□□□□ 0.16
DDB1-220ENST00000542337 PIN1P1O15428 100 aa16.05■□□□□ 0.16
DDB1-220ENST00000542337 PLXNB1O43157 2135 aa16.05■□□□□ 0.16
DDB1-220ENST00000542337 TXNL1O43396 289 aa16.05■□□□□ 0.16
DDB1-220ENST00000542337 PRB2P02812 416 aaPredicted RBP16.05■□□□□ 0.16
DDB1-220ENST00000542337 LOXL3P58215 753 aa16.05■□□□□ 0.16
DDB1-220ENST00000542337 SLC35A2P78381 396 aa16.05■□□□□ 0.16
DDB1-220ENST00000542337 GPR50Q13585 617 aa16.05■□□□□ 0.16
DDB1-220ENST00000542337 SLC35E3Q7Z769 313 aa16.05■□□□□ 0.16
DDB1-220ENST00000542337 PRR18Q8N4B5 295 aa16.05■□□□□ 0.16
DDB1-220ENST00000542337 DCLRE1BQ9H816 532 aa16.05■□□□□ 0.16
DDB1-220ENST00000542337 FKBP14Q9NWM8 211 aa16.05■□□□□ 0.16
DDB1-220ENST00000542337 IGHV3-72A0A0B4J1Y9 119 aa16.04■□□□□ 0.16
DDB1-220ENST00000542337 HBZP02008 142 aa16.04■□□□□ 0.16
DDB1-220ENST00000542337 CDK1P06493 297 aa16.04■□□□□ 0.16
DDB1-220ENST00000542337 UBBP0CG47 229 aa16.04■□□□□ 0.16
DDB1-220ENST00000542337 CD1BP29016 333 aa16.04■□□□□ 0.16
DDB1-220ENST00000542337 GABPB1Q06547 395 aaPredicted RBP16.04■□□□□ 0.16
DDB1-220ENST00000542337 EBI3Q14213 229 aa16.04■□□□□ 0.16
DDB1-220ENST00000542337 ACSM3Q53FZ2 586 aa16.04■□□□□ 0.16
DDB1-220ENST00000542337 RNLSQ5VYX0 342 aa16.04■□□□□ 0.16
DDB1-220ENST00000542337 GLT8D1Q68CQ7 371 aa16.04■□□□□ 0.16
DDB1-220ENST00000542337 ZNF329Q86UD4 541 aa16.04■□□□□ 0.16
DDB1-220ENST00000542337 IZUMO1Q8IYV9 350 aa16.04■□□□□ 0.16
DDB1-220ENST00000542337 COMMD1Q8N668 190 aa16.04■□□□□ 0.16
DDB1-220ENST00000542337 TMEM104Q8NE00 496 aa16.04■□□□□ 0.16
DDB1-220ENST00000542337 OR51D1Q8NGF3 324 aa16.04■□□□□ 0.16
DDB1-220ENST00000542337 PHF21AQ96BD5 680 aa16.04■□□□□ 0.16
DDB1-220ENST00000542337 EAF1Q96JC9 268 aaPredicted RBP16.04■□□□□ 0.16
DDB1-220ENST00000542337 PRKDCP78527 4128 aaKnown RBP16.04■□□□□ 0.16
DDB1-220ENST00000542337 UBE2QL1A1L167 161 aa16.03■□□□□ 0.16
DDB1-220ENST00000542337 H0YHG0 523 aa16.03■□□□□ 0.16
DDB1-220ENST00000542337 DUS4LO95620 317 aaKnown RBP16.03■□□□□ 0.16
DDB1-220ENST00000542337 IGLL1P15814 213 aa16.03■□□□□ 0.16
DDB1-220ENST00000542337 STEAP3Q658P3 488 aa16.03■□□□□ 0.16
DDB1-220ENST00000542337 C10orf99Q6UWK7 81 aa16.03■□□□□ 0.16
DDB1-220ENST00000542337 TGIF2LXQ8IUE1 241 aa16.03■□□□□ 0.16
DDB1-220ENST00000542337 OR10V1Q8NGI7 309 aa16.03■□□□□ 0.16
DDB1-220ENST00000542337 MRAPQ8TCY5 172 aa16.03■□□□□ 0.16
DDB1-220ENST00000542337 RTN4IP1Q8WWV3 396 aaPredicted RBP16.03■□□□□ 0.16
DDB1-220ENST00000542337 FAM46BQ96A09 425 aa16.03■□□□□ 0.16
DDB1-220ENST00000542337 RCC1LQ96I51 464 aaKnown RBP16.03■□□□□ 0.16
DDB1-220ENST00000542337 Q96M66 194 aa16.03■□□□□ 0.16
DDB1-220ENST00000542337 GON7Q9BXV9 100 aa16.03■□□□□ 0.16
DDB1-220ENST00000542337 ZFP57Q9NU63 452 aa16.03■□□□□ 0.16
DDB1-220ENST00000542337 NOTCH3Q9UM47 2321 aa16.02■□□□□ 0.16
DDB1-220ENST00000542337 PDCD6O75340 191 aa16.02■□□□□ 0.16
DDB1-220ENST00000542337 MOSP00540 346 aa16.02■□□□□ 0.16
DDB1-220ENST00000542337 IGHG2P01859 326 aa16.02■□□□□ 0.16
DDB1-220ENST00000542337 SPHARQ15513 63 aa16.02■□□□□ 0.16
DDB1-220ENST00000542337 C6orf141Q5SZD1 244 aa16.02■□□□□ 0.16
DDB1-220ENST00000542337 SLC25A48Q6ZT89 311 aaKnown RBP16.02■□□□□ 0.16
DDB1-220ENST00000542337 ZNF554Q86TJ5 538 aa16.02■□□□□ 0.16
DDB1-220ENST00000542337 LYPD6Q86Y78 171 aa16.02■□□□□ 0.16
DDB1-220ENST00000542337 GAPTQ8N292 157 aa16.02■□□□□ 0.16
DDB1-220ENST00000542337 OR1L1Q8NH94 360 aa16.02■□□□□ 0.16
DDB1-220ENST00000542337 PHYHIPQ92561 330 aa16.02■□□□□ 0.16
DDB1-220ENST00000542337 ST6GALNAC6Q969X2 333 aa16.02■□□□□ 0.16
DDB1-220ENST00000542337 NOL4LQ96MY1 436 aaPredicted RBP16.02■□□□□ 0.16
DDB1-220ENST00000542337 NEDD4LQ96PU5 975 aa16.02■□□□□ 0.16
DDB1-220ENST00000542337 RASL11BQ9BPW5 248 aa16.02■□□□□ 0.16
DDB1-220ENST00000542337 TMED9Q9BVK6 235 aa16.02■□□□□ 0.16
DDB1-220ENST00000542337 TAF9BQ9HBM6 251 aa16.02■□□□□ 0.16
DDB1-220ENST00000542337 OR2S2Q9NQN1 319 aa16.02■□□□□ 0.16
DDB1-220ENST00000542337 LRRC42Q9Y546 428 aa16.02■□□□□ 0.16
DDB1-220ENST00000542337 SC5DO75845 299 aa16.01■□□□□ 0.15
DDB1-220ENST00000542337 MPIG6BO95866 241 aa16.01■□□□□ 0.15
DDB1-220ENST00000542337 RCC1P18754 421 aaPredicted RBP16.01■□□□□ 0.15
DDB1-220ENST00000542337 SLC6A1P30531 599 aa16.01■□□□□ 0.15
DDB1-220ENST00000542337 VHLP40337 213 aa16.01■□□□□ 0.15
DDB1-220ENST00000542337 MED22Q15528 200 aa16.01■□□□□ 0.15
DDB1-220ENST00000542337 NKAPLQ5M9Q1 402 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms