RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 SRD5A2P31213 254 aa13.13□□□□□ -0.31
CNOT9-208ENST00000542068 HIST2H3PS2Q5TEC6 136 aa13.13□□□□□ -0.31
CNOT9-208ENST00000542068 LRTM2Q8N967 370 aa13.13□□□□□ -0.31
CNOT9-208ENST00000542068 DEFB127Q9H1M4 99 aa13.13□□□□□ -0.31
CNOT9-208ENST00000542068 PPP1R3CQ9UQK1 317 aa13.13□□□□□ -0.31
CNOT9-208ENST00000542068 CHD3Q12873 2000 aaKnown RBP13.12□□□□□ -0.31
CNOT9-208ENST00000542068 IFNA5P01569 189 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 SERPINE2P07093 398 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 FKBP2P26885 142 aaKnown RBP13.12□□□□□ -0.31
CNOT9-208ENST00000542068 DHRS13Q6UX07 377 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 PLK3Q9H4B4 646 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 GFOD1Q9NXC2 390 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 DMRT1Q9Y5R6 373 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 CDS2O95674 445 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 HLA-DRB3P79483 266 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 TESK1Q15569 626 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 ATP1A1-AS1Q5TC04 95 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 ODF3L1Q8IXM7 274 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 CLDND2Q8NHS1 167 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 SIGLEC12Q96PQ1 595 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 OR2H1Q9GZK4 316 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 UFSP2Q9NUQ7 469 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 LOC102723996A0A087X1L8 192 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 BMP5P22003 454 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 PMELP40967 661 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 TLE4Q04727 773 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 HERPUD1Q15011 391 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 ZNF787Q6DD87 383 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 STX12Q86Y82 276 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 SCGB1C1Q8TD33 95 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 MALSU1Q96EH3 234 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 HIST1H2AAQ96QV6 131 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 RPRMQ9NS64 109 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 GAB2Q9UQC2 676 aa13.12□□□□□ -0.31
CNOT9-208ENST00000542068 ZNF816-ZNF321PA0A0X1KG74 233 aa13.11□□□□□ -0.31
CNOT9-208ENST00000542068 DKK1O94907 266 aa13.11□□□□□ -0.31
CNOT9-208ENST00000542068 PSG2P11465 335 aa13.11□□□□□ -0.31
CNOT9-208ENST00000542068 ADIRFQ15847 76 aa13.11□□□□□ -0.31
CNOT9-208ENST00000542068 WDR5BQ86VZ2 330 aa13.11□□□□□ -0.31
CNOT9-208ENST00000542068 UBALD2Q8IYN6 164 aa13.11□□□□□ -0.31
CNOT9-208ENST00000542068 CPEB3Q8NE35 698 aaKnown RBP13.11□□□□□ -0.31
CNOT9-208ENST00000542068 ABHD5Q8WTS1 349 aa13.11□□□□□ -0.31
CNOT9-208ENST00000542068 GPR35Q9HC97 309 aa13.11□□□□□ -0.31
CNOT9-208ENST00000542068 ERRFI1Q9UJM3 462 aaPredicted RBP13.11□□□□□ -0.31
CNOT9-208ENST00000542068 KCNS2Q9ULS6 477 aa13.11□□□□□ -0.31
CNOT9-208ENST00000542068 PIEZO2Q9H5I5 2752 aa13.11□□□□□ -0.31
CNOT9-208ENST00000542068 hCG_38984A0A1B0GV85 526 aa13.11□□□□□ -0.31
CNOT9-208ENST00000542068 ZNF729A6NN14 1252 aaPredicted RBP13.11□□□□□ -0.31
CNOT9-208ENST00000542068 PHOX2AO14813 284 aa13.11□□□□□ -0.31
CNOT9-208ENST00000542068 SYNGR4O95473 234 aa13.11□□□□□ -0.31
CNOT9-208ENST00000542068 NGFP01138 241 aa13.11□□□□□ -0.31
CNOT9-208ENST00000542068 HIST1H3AP68431 136 aa13.11□□□□□ -0.31
CNOT9-208ENST00000542068 CFAP47Q6ZTR5 3102 aa13.11□□□□□ -0.31
CNOT9-208ENST00000542068 ZNF732B4DXR9 585 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 SYNGR1O43759 233 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 CD55P08174 381 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 TMEM164Q5U3C3 297 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 OR8G2PQ6IF36 304 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 RNF138Q8WVD3 245 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 YPEL4Q96NS1 127 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 STRADBQ9C0K7 418 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 LOC102725191A0A1B0GVB3 256 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 ARGFXA6NJG6 315 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 SPANXN5Q5MJ07 72 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 TMEM211Q6ICI0 200 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 TMPRSS7Q7RTY8 843 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 RPUSD4Q96CM3 377 aaKnown RBP13.1□□□□□ -0.31
CNOT9-208ENST00000542068 GNPNAT1Q96EK6 184 aaPredicted RBP13.1□□□□□ -0.31
CNOT9-208ENST00000542068 CABLES2Q9BTV7 478 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 TREM2Q9NZC2 230 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 FOXJ2Q9P0K8 574 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 CACNG5Q9UF02 275 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 BOKQ9UMX3 212 aaPredicted RBP13.1□□□□□ -0.31
CNOT9-208ENST00000542068 GLIPR1P48060 266 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 PRDX4Q13162 271 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 C20orf204Q6ZNR8 217 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 GGNQ86UU5 652 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 LILRB2Q8N423 598 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 GPR146Q96CH1 333 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 C10orf35Q96D05 121 aa13.1□□□□□ -0.31
CNOT9-208ENST00000542068 ACACAQ13085 2346 aa13.09□□□□□ -0.31
CNOT9-208ENST00000542068 IGKV1-6A0A0C4DH72 117 aa13.09□□□□□ -0.31
CNOT9-208ENST00000542068 ZNF705GA8MUZ8 300 aaPredicted RBP13.09□□□□□ -0.31
CNOT9-208ENST00000542068 VDAC1P21796 283 aa13.09□□□□□ -0.31
CNOT9-208ENST00000542068 MPLP40238 635 aa13.09□□□□□ -0.31
CNOT9-208ENST00000542068 ZXDAP98168 799 aa13.09□□□□□ -0.31
CNOT9-208ENST00000542068 ZFP36L1Q07352 338 aaKnown RBP13.09□□□□□ -0.31
CNOT9-208ENST00000542068 SSX7Q7RTT5 188 aa13.09□□□□□ -0.31
CNOT9-208ENST00000542068 WFIKKN1Q96NZ8 548 aa13.09□□□□□ -0.31
CNOT9-208ENST00000542068 ATP5SQ99766 215 aa13.09□□□□□ -0.31
CNOT9-208ENST00000542068 LRRC3CA6NJW4 275 aa13.09□□□□□ -0.31
CNOT9-208ENST00000542068 RPL36A-HNRNPH2H7BZ11 118 aa13.09□□□□□ -0.31
CNOT9-208ENST00000542068 USF2Q15853 346 aaPredicted RBP13.09□□□□□ -0.31
CNOT9-208ENST00000542068 Q6ZRM9 215 aa13.09□□□□□ -0.31
CNOT9-208ENST00000542068 SSX9Q7RTT3 188 aa13.09□□□□□ -0.31
CNOT9-208ENST00000542068 KDF1Q8NAX2 398 aaPredicted RBP13.09□□□□□ -0.31
CNOT9-208ENST00000542068 CPT1CQ8TCG5 803 aa13.09□□□□□ -0.31
CNOT9-208ENST00000542068 TAAR3PQ9P1P4 343 aa13.09□□□□□ -0.31
CNOT9-208ENST00000542068 IL17BQ9UHF5 180 aa13.09□□□□□ -0.31
CNOT9-208ENST00000542068 ZNF716A6NP11 495 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms