RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 GAFA1Q96PS6 74 aa23.08■■□□□ 1.29
CCM2-218ENST00000541586 ZNF69Q9UC07 566 aa23.08■■□□□ 1.29
CCM2-218ENST00000541586 PPIAL4AQ9Y536 164 aa23.08■■□□□ 1.29
CCM2-218ENST00000541586 A0A1B0GW55 424 aa23.08■■□□□ 1.28
CCM2-218ENST00000541586 MGST3O14880 152 aa23.08■■□□□ 1.28
CCM2-218ENST00000541586 CREBL2O60519 120 aaPredicted RBP23.08■■□□□ 1.28
CCM2-218ENST00000541586 TK1P04183 234 aa23.08■■□□□ 1.28
CCM2-218ENST00000541586 DUX4L2P0CJ85 424 aa23.08■■□□□ 1.28
CCM2-218ENST00000541586 DUX4L3P0CJ86 424 aa23.08■■□□□ 1.28
CCM2-218ENST00000541586 DUX4L4P0CJ87 422 aa23.08■■□□□ 1.28
CCM2-218ENST00000541586 DUX4L5P0CJ88 424 aa23.08■■□□□ 1.28
CCM2-218ENST00000541586 DUX4L6P0CJ89 424 aa23.08■■□□□ 1.28
CCM2-218ENST00000541586 DUX4L7P0CJ90 424 aa23.08■■□□□ 1.28
CCM2-218ENST00000541586 SELLP14151 372 aa23.08■■□□□ 1.28
CCM2-218ENST00000541586 ECI1P42126 302 aa23.08■■□□□ 1.28
CCM2-218ENST00000541586 GPR6P46095 362 aaPredicted RBP23.08■■□□□ 1.28
CCM2-218ENST00000541586 EDDM3AQ14507 147 aa23.08■■□□□ 1.28
CCM2-218ENST00000541586 SURF2Q15527 256 aaPredicted RBP23.08■■□□□ 1.28
CCM2-218ENST00000541586 DUX4L9Q6RFH8 374 aaPredicted RBP23.08■■□□□ 1.28
CCM2-218ENST00000541586 ZNF788Q6ZQV5 615 aa23.08■■□□□ 1.28
CCM2-218ENST00000541586 CCL13Q99616 98 aa23.08■■□□□ 1.28
CCM2-218ENST00000541586 ZNF665Q9H7R5 613 aa23.08■■□□□ 1.28
CCM2-218ENST00000541586 DUX4Q9UBX2 424 aa23.08■■□□□ 1.28
CCM2-218ENST00000541586 IGHV4-30-2A0A087WSY4 118 aa23.07■■□□□ 1.28
CCM2-218ENST00000541586 SSNA1O43805 119 aa23.07■■□□□ 1.28
CCM2-218ENST00000541586 FCN2Q15485 313 aa23.07■■□□□ 1.28
CCM2-218ENST00000541586 HMGN3Q15651 99 aa23.07■■□□□ 1.28
CCM2-218ENST00000541586 C10orf105Q8TEF2 133 aa23.07■■□□□ 1.28
CCM2-218ENST00000541586 KIRREL1Q96J84 757 aa23.07■■□□□ 1.28
CCM2-218ENST00000541586 Q96MF0 132 aa23.07■■□□□ 1.28
CCM2-218ENST00000541586 RTBDNQ9BSG5 229 aaPredicted RBP23.07■■□□□ 1.28
CCM2-218ENST00000541586 PIMREGQ9BSJ6 248 aa23.07■■□□□ 1.28
CCM2-218ENST00000541586 CABLES2Q9BTV7 478 aa23.07■■□□□ 1.28
CCM2-218ENST00000541586 BPESC1Q9GZL8 116 aa23.07■■□□□ 1.28
CCM2-218ENST00000541586 TAF9BQ9HBM6 251 aa23.07■■□□□ 1.28
CCM2-218ENST00000541586 PCDHB10Q9UN67 800 aa23.07■■□□□ 1.28
CCM2-218ENST00000541586 A8MV72 311 aaPredicted RBP23.06■■□□□ 1.28
CCM2-218ENST00000541586 PGAM2P15259 253 aa23.06■■□□□ 1.28
CCM2-218ENST00000541586 PI3P19957 117 aa23.06■■□□□ 1.28
CCM2-218ENST00000541586 AADACP22760 399 aa23.06■■□□□ 1.28
CCM2-218ENST00000541586 DSCR9P59020 149 aa23.06■■□□□ 1.28
CCM2-218ENST00000541586 CD276Q5ZPR3 534 aa23.06■■□□□ 1.28
CCM2-218ENST00000541586 PRSS57Q6UWY2 283 aa23.06■■□□□ 1.28
CCM2-218ENST00000541586 PRR18Q8N4B5 295 aa23.06■■□□□ 1.28
CCM2-218ENST00000541586 TIMD4Q96H15 378 aa23.06■■□□□ 1.28
CCM2-218ENST00000541586 FXYD6Q9H0Q3 95 aa23.06■■□□□ 1.28
CCM2-218ENST00000541586 NARFLQ9H6Q4 476 aa23.06■■□□□ 1.28
CCM2-218ENST00000541586 HNRNPCP07910 306 aaKnown RBP eCLIP23.05■■□□□ 1.28
CCM2-218ENST00000541586 AKR1C4P17516 323 aa23.05■■□□□ 1.28
CCM2-218ENST00000541586 FXYD4P59646 89 aa23.05■■□□□ 1.28
CCM2-218ENST00000541586 KRTAP1-3Q8IUG1 177 aa23.05■■□□□ 1.28
CCM2-218ENST00000541586 MUC20Q8N307 709 aaPredicted RBP23.05■■□□□ 1.28
CCM2-218ENST00000541586 WFDC11Q8NEX6 87 aa23.05■■□□□ 1.28
CCM2-218ENST00000541586 IL1F10Q8WWZ1 152 aa23.05■■□□□ 1.28
CCM2-218ENST00000541586 RAB1CQ92928 201 aa23.05■■□□□ 1.28
CCM2-218ENST00000541586 MOB3AQ96BX8 217 aa23.05■■□□□ 1.28
CCM2-218ENST00000541586 KCNIP1Q9NZI2 227 aa23.05■■□□□ 1.28
CCM2-218ENST00000541586 TRBV6-7A0A0A0MS04 114 aa23.05■■□□□ 1.28
CCM2-218ENST00000541586 SIGLEC5O15389 551 aa23.05■■□□□ 1.28
CCM2-218ENST00000541586 FAHD2BQ6P2I3 314 aaPredicted RBP23.05■■□□□ 1.28
CCM2-218ENST00000541586 FAM216BQ8N7L0 139 aa23.05■■□□□ 1.28
CCM2-218ENST00000541586 TMEM185AQ8NFB2 350 aa23.05■■□□□ 1.28
CCM2-218ENST00000541586 OR5D13Q8NGL4 314 aa23.05■■□□□ 1.28
CCM2-218ENST00000541586 UBALD1Q8TB05 177 aa23.05■■□□□ 1.28
CCM2-218ENST00000541586 ZNF431Q8TF32 576 aaPredicted RBP23.05■■□□□ 1.28
CCM2-218ENST00000541586 TOMM40LQ969M1 308 aa23.05■■□□□ 1.28
CCM2-218ENST00000541586 FAHD2AQ96GK7 314 aa23.05■■□□□ 1.28
CCM2-218ENST00000541586 ST6GAL2Q96JF0 529 aa23.05■■□□□ 1.28
CCM2-218ENST00000541586 SLC23A1Q9UHI7 598 aa23.05■■□□□ 1.28
CCM2-218ENST00000541586 BOLA2-SMG1P6H3BVE0 249 aa23.04■■□□□ 1.28
CCM2-218ENST00000541586 PPYP01298 95 aa23.04■■□□□ 1.28
CCM2-218ENST00000541586 TAS2R31P59538 309 aa23.04■■□□□ 1.28
CCM2-218ENST00000541586 DHRS2Q13268 280 aa23.04■■□□□ 1.28
CCM2-218ENST00000541586 PPP1R1AQ13522 171 aa23.04■■□□□ 1.28
CCM2-218ENST00000541586 OR13A1Q8NGR1 328 aa23.04■■□□□ 1.28
CCM2-218ENST00000541586 MRGPRDQ8TDS7 321 aa23.04■■□□□ 1.28
CCM2-218ENST00000541586 TMEM230Q96A57 120 aa23.04■■□□□ 1.28
CCM2-218ENST00000541586 NKX6-3A6NJ46 265 aa23.03■■□□□ 1.28
CCM2-218ENST00000541586 C12orf77C9JDV5 145 aa23.03■■□□□ 1.28
CCM2-218ENST00000541586 NDUFS8O00217 210 aa23.03■■□□□ 1.28
CCM2-218ENST00000541586 TUSC2O75896 110 aa23.03■■□□□ 1.28
CCM2-218ENST00000541586 ZNF728P0DKX0 622 aa23.03■■□□□ 1.28
CCM2-218ENST00000541586 ZBTB25P24278 435 aa23.03■■□□□ 1.28
CCM2-218ENST00000541586 HERV-K104P61576 105 aa23.03■■□□□ 1.28
CCM2-218ENST00000541586 IL13RA1P78552 427 aa23.03■■□□□ 1.28
CCM2-218ENST00000541586 OR11H7Q8NGC8 314 aa23.03■■□□□ 1.28
CCM2-218ENST00000541586 OR10J5Q8NHC4 309 aa23.03■■□□□ 1.28
CCM2-218ENST00000541586 FAM234AQ9H0X4 552 aa23.03■■□□□ 1.28
CCM2-218ENST00000541586 ODAMA1E959 279 aa23.02■■□□□ 1.28
CCM2-218ENST00000541586 TMPRSS2O15393 492 aa23.02■■□□□ 1.28
CCM2-218ENST00000541586 DIRAS3O95661 229 aa23.02■■□□□ 1.28
CCM2-218ENST00000541586 HLA-AP01891 365 aaKnown RBP23.02■■□□□ 1.28
CCM2-218ENST00000541586 P2RX3P56373 397 aa23.02■■□□□ 1.28
CCM2-218ENST00000541586 CD83Q01151 205 aa23.02■■□□□ 1.28
CCM2-218ENST00000541586 C6orf183Q5T699 404 aa23.02■■□□□ 1.28
CCM2-218ENST00000541586 DCTN5Q9BTE1 182 aa23.02■■□□□ 1.28
CCM2-218ENST00000541586 DNTTIP1Q9H147 329 aa23.02■■□□□ 1.28
CCM2-218ENST00000541586 OR1A1Q9P1Q5 309 aa23.02■■□□□ 1.28
CCM2-218ENST00000541586 C14orf166Q9Y224 244 aaKnown RBP23.02■■□□□ 1.28
CCM2-218ENST00000541586 NPIPB11E5RHQ5 1161 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms