RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 ANKRD60Q9BZ19 345 aa9.02□□□□□ -0.97
COPA-205ENST00000541366 HIPK2Q9H2X6 1198 aa9.02□□□□□ -0.97
COPA-205ENST00000541366 TUBA4BQ9H853 241 aa9.02□□□□□ -0.97
COPA-205ENST00000541366 RHOFQ9HBH0 211 aa9.02□□□□□ -0.97
COPA-205ENST00000541366 GFOD1Q9NXC2 390 aa9.02□□□□□ -0.97
COPA-205ENST00000541366 FRRS1LQ9P0K9 344 aa9.02□□□□□ -0.97
COPA-205ENST00000541366 STUB1Q9UNE7 303 aa9.02□□□□□ -0.97
COPA-205ENST00000541366 A3GALT2U3KPV4 340 aa9.02□□□□□ -0.97
COPA-205ENST00000541366 SLC25A17O43808 307 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 SNX3O60493 162 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 SULT1C4O75897 302 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 BRI3O95415 125 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 HLA-DRB1P01911 266 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 MT-ND2P03891 347 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 OR2T7P0C7T2 308 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 IL3RAP26951 378 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 ACTBP60709 375 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 ZNF85Q03923 595 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 LSAMPQ13449 338 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 KISS1Q15726 138 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 C19orf54Q5BKX5 351 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 CT45A1Q5HYN5 189 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 SLC25A48Q6ZT89 311 aaKnown RBP9.01□□□□□ -0.97
COPA-205ENST00000541366 ZNF439Q8NDP4 499 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 OR10V1Q8NGI7 309 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 OR13C3Q8NGS6 347 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 CT45A3Q8NHU0 189 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 IL17DQ8TAD2 202 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 MS4A10Q96PG2 267 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 DPCDQ9BVM2 203 aaPredicted RBP9.01□□□□□ -0.97
COPA-205ENST00000541366 NDE1Q9NXR1 346 aa9.01□□□□□ -0.97
COPA-205ENST00000541366 MRPS28Q9Y2Q9 187 aaKnown RBP9.01□□□□□ -0.97
COPA-205ENST00000541366 B2RBV5 119 aa9□□□□□ -0.97
COPA-205ENST00000541366 HSPB1P04792 205 aaKnown RBP9□□□□□ -0.97
COPA-205ENST00000541366 DBTP11182 482 aaKnown RBP9□□□□□ -0.97
COPA-205ENST00000541366 PAX5Q02548 391 aa9□□□□□ -0.97
COPA-205ENST00000541366 LRRC36Q1X8D7 754 aa9□□□□□ -0.97
COPA-205ENST00000541366 ZNF691Q5VV52 312 aa9□□□□□ -0.97
COPA-205ENST00000541366 C12orf73Q69YU5 71 aa9□□□□□ -0.97
COPA-205ENST00000541366 ELP2Q6IA86 826 aa9□□□□□ -0.97
COPA-205ENST00000541366 LINC00528Q8N1L1 170 aa9□□□□□ -0.97
COPA-205ENST00000541366 C8orf31Q8N9H6 132 aa9□□□□□ -0.97
COPA-205ENST00000541366 OR52M1Q8NGK5 317 aa9□□□□□ -0.97
COPA-205ENST00000541366 DDB2Q92466 427 aa9□□□□□ -0.97
COPA-205ENST00000541366 LRGUKQ96M69 825 aa9□□□□□ -0.97
COPA-205ENST00000541366 ELOVL1Q9BW60 279 aa9□□□□□ -0.97
COPA-205ENST00000541366 VPS13DQ5THJ4 4388 aa8.99□□□□□ -0.97
COPA-205ENST00000541366 IZUMO1RA6ND01 250 aa8.99□□□□□ -0.97
COPA-205ENST00000541366 ISG15P05161 165 aa8.99□□□□□ -0.97
COPA-205ENST00000541366 FSTP19883 344 aa8.99□□□□□ -0.97
COPA-205ENST00000541366 GZMHP20718 246 aa8.99□□□□□ -0.97
COPA-205ENST00000541366 KCNJ3P48549 501 aa8.99□□□□□ -0.97
COPA-205ENST00000541366 ZNF137PP52743 207 aa8.99□□□□□ -0.97
COPA-205ENST00000541366 IL13RA2Q14627 380 aa8.99□□□□□ -0.97
COPA-205ENST00000541366 C5orf64Q2M2E5 130 aa8.99□□□□□ -0.97
COPA-205ENST00000541366 FAHD1Q6P587 224 aa8.99□□□□□ -0.97
COPA-205ENST00000541366 FAM220AQ7Z4H9 259 aa8.99□□□□□ -0.97
COPA-205ENST00000541366 C5orf24Q7Z6I8 188 aa8.99□□□□□ -0.97
COPA-205ENST00000541366 GID4Q8IVV7 300 aa8.99□□□□□ -0.97
COPA-205ENST00000541366 RPP25LQ8N5L8 163 aaKnown RBP8.99□□□□□ -0.97
COPA-205ENST00000541366 THAP7Q9BT49 309 aaPredicted RBP8.99□□□□□ -0.97
COPA-205ENST00000541366 CHCHD3Q9NX63 227 aaKnown RBP8.99□□□□□ -0.97
COPA-205ENST00000541366 WARS2Q9UGM6 360 aaKnown RBP8.99□□□□□ -0.97
COPA-205ENST00000541366 FOXA2Q9Y261 457 aaPredicted RBP8.99□□□□□ -0.97
COPA-205ENST00000541366 CEPT1Q9Y6K0 416 aa8.99□□□□□ -0.97
COPA-205ENST00000541366 TMEM30CPA0ZSE6 113 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 ZAR1LA6NP61 321 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 GABRPO00591 440 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 FCN1O00602 326 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 NBR2O15453 112 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 TXNL1O43396 289 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 HTR3BO95264 441 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 EGR2P11161 476 aaPredicted RBP8.98□□□□□ -0.97
COPA-205ENST00000541366 RNLSQ5VYX0 342 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 LIN54Q6MZP7 749 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 IL34Q6ZMJ4 242 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 LINC00322Q6ZN03 302 aaPredicted RBP8.98□□□□□ -0.97
COPA-205ENST00000541366 SATL1Q86VE3 508 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 OR1L1Q8NH94 360 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 TNFAIP8L1Q8WVP5 186 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 FLYWCH2Q96CP2 140 aaKnown RBP8.98□□□□□ -0.97
COPA-205ENST00000541366 CYYR1Q96J86 154 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 ZNF251Q9BRH9 671 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 FAM103A1Q9BTL3 118 aaKnown RBP8.98□□□□□ -0.97
COPA-205ENST00000541366 MRPL20Q9BYC9 149 aaKnown RBP8.98□□□□□ -0.97
COPA-205ENST00000541366 PRRG3Q9BZD7 231 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 PLEKHA3Q9HB20 300 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 ARGLU1Q9NWB6 273 aaPredicted RBP8.98□□□□□ -0.97
COPA-205ENST00000541366 ZNF446Q9NWS9 450 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 GNG12Q9UBI6 72 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 ADAM30Q9UKF2 790 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 GAB2Q9UQC2 676 aa8.98□□□□□ -0.97
COPA-205ENST00000541366 OR4C45A6NMZ5 311 aa8.97□□□□□ -0.97
COPA-205ENST00000541366 GEMIN2O14893 280 aaKnown RBP8.97□□□□□ -0.97
COPA-205ENST00000541366 SULT1B1O43704 296 aa8.97□□□□□ -0.97
COPA-205ENST00000541366 OR7C1O76099 320 aaPredicted RBP8.97□□□□□ -0.97
COPA-205ENST00000541366 RGS11O94810 467 aa8.97□□□□□ -0.97
COPA-205ENST00000541366 CDRT1O95170 752 aa8.97□□□□□ -0.97
COPA-205ENST00000541366 MT-ND4P03905 459 aa8.97□□□□□ -0.97
COPA-205ENST00000541366 ATP6V1E1P36543 226 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms