RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 HBG1P69891 147 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 HBG2P69892 147 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 RNF4P78317 190 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 RPL19P84098 196 aaKnown RBP8.96□□□□□ -0.98
CHFR-219ENST00000541341 COA6Q5JTJ3 125 aaKnown RBP8.96□□□□□ -0.98
CHFR-219ENST00000541341 OR2T2Q6IF00 324 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 TMEM182Q6ZP80 229 aaPredicted RBP8.96□□□□□ -0.98
CHFR-219ENST00000541341 FAM57BQ71RH2 274 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 DPPA2Q7Z7J5 298 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 MRGPRGQ86SM5 289 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 TMEM183AQ8IXX5 376 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 HIST3H2BBQ8N257 126 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 OR10D4PQ8NGN7 298 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 RNF138Q8WVD3 245 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 ROBO4Q8WZ75 1007 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 PSMF1Q92530 271 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 ANAPC16Q96DE5 110 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 OR5B12Q96R08 314 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 ATP5SQ99766 215 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 SMIM3Q9BZL3 60 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 TMEM222Q9H0R3 208 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 SRD5A3Q9H8P0 318 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 RCL1Q9Y2P8 373 aaKnown RBP8.96□□□□□ -0.98
CHFR-219ENST00000541341 UBE2J1Q9Y385 318 aaPredicted RBP8.96□□□□□ -0.98
CHFR-219ENST00000541341 HCFC1P51610 2035 aa8.96□□□□□ -0.98
CHFR-219ENST00000541341 PKDREJQ9NTG1 2253 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 C19orf84I3L1E1 186 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 MPPED1O15442 326 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 CYB5BO43169 146 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 KCNAB3O43448 404 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 PRKNO60260 465 aaPredicted RBP8.95□□□□□ -0.98
CHFR-219ENST00000541341 LMX1BO60663 402 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 HIST1H2BKO60814 126 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 ZFAND5O76080 213 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 TK1P04183 234 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 HIST1H2BJP06899 126 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 PI3P19957 117 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 HIST1H2BOP23527 126 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 ATP6V0CP27449 155 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 HIST1H2BBP33778 126 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 CD200P41217 278 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 FUT6P51993 359 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 FAM3BP58499 235 aaPredicted RBP8.95□□□□□ -0.98
CHFR-219ENST00000541341 HIST1H2BDP58876 126 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 PCBD1P61457 104 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 HIST1H2BCP62807 126 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 FMODQ06828 376 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 JOSD1Q15040 202 aaPredicted RBP8.95□□□□□ -0.98
CHFR-219ENST00000541341 CDSNQ15517 529 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 HAGHQ16775 308 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 HIST2H2BEQ16778 126 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 PYY3Q5JQD4 70 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.95□□□□□ -0.98
CHFR-219ENST00000541341 NCMAPQ5T1S8 102 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 ZNF324BQ6AW86 544 aaPredicted RBP8.95□□□□□ -0.98
CHFR-219ENST00000541341 SLC25A24Q6NUK1 477 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 LINC00596Q86U02 117 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 SAXO1Q8IYX7 474 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 TMEM156Q8N614 296 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 OR10A7Q8NGE5 316 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 OR10S1Q8NGN2 331 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 HIST1H2BHQ93079 126 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 ERGIC1Q969X5 290 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 TMEM18Q96B42 140 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 MSI2Q96DH6 328 aaKnown RBP8.95□□□□□ -0.98
CHFR-219ENST00000541341 BORCS8Q96FH0 119 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 FOXN4Q96NZ1 517 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 HIST1H2BNQ99877 126 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 HIST1H2BMQ99879 126 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 AGMATQ9BSE5 352 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 HES7Q9BYE0 225 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 CHODLQ9H9P2 273 aa8.95□□□□□ -0.98
CHFR-219ENST00000541341 TRAV17A0A0B4J275 112 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 TRBV11-1A0A0K0K1C0 115 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 A0A1B0GU03 582 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 A0A1W2PPE3 182 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 AQP7P3A6NL99 342 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 PHF1O43189 567 aaPredicted RBP8.94□□□□□ -0.98
CHFR-219ENST00000541341 PDCD6O75340 191 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 QDPRP09417 244 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 METTL15P1P0C7V9 234 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 HLA-DOBP13765 273 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 COX6B1P14854 86 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 PAX1P15863 534 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 FUT3P21217 361 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 OTX1P32242 354 aaPredicted RBP8.94□□□□□ -0.98
CHFR-219ENST00000541341 KRTAP10-9P60411 292 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 RANP62826 216 aaKnown RBP8.94□□□□□ -0.98
CHFR-219ENST00000541341 NHLH2Q02577 135 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 PRDX4Q13162 271 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 IQCJQ1A5X6 159 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 KCNIP4Q6PIL6 250 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 SLC25A26Q70HW3 274 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 PRR22Q8IZ63 422 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 OSR2Q8N2R0 312 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 OR2V1Q8NHB1 315 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 HPSE2Q8WWQ2 592 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 MBD3L1Q8WWY6 194 aa8.94□□□□□ -0.98
CHFR-219ENST00000541341 ZNF775Q96BV0 537 aaPredicted RBP8.94□□□□□ -0.98
CHFR-219ENST00000541341 PACRGQ96M98 296 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms