RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 GCNT2Q8N0V5 402 aa10.68□□□□□ -0.7
RNF4-222ENST00000541204 PRDM14Q9GZV8 571 aa10.68□□□□□ -0.7
RNF4-222ENST00000541204 CCL28Q9NRJ3 127 aa10.68□□□□□ -0.7
RNF4-222ENST00000541204 TRGV5A0A0B4J1U4 118 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 IGHV3-64DA0A0J9YX35 117 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 CHST1O43916 411 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 LILRA1O75019 489 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 FTH1P19P0C7X4 201 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 KIAA0141Q14154 515 aaPredicted RBP10.67□□□□□ -0.7
RNF4-222ENST00000541204 NMSQ5H8A3 153 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 FAM209BQ5JX69 171 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 C1QL4Q86Z23 238 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 CYB561D1Q8N8Q1 229 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 PLPPR1Q8TBJ4 325 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 LINC00470Q9BZP3 86 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 FGF23Q9GZV9 251 aaPredicted RBP10.67□□□□□ -0.7
RNF4-222ENST00000541204 KIAA1456Q9P272 454 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 URGCP-MRPS24S4R325 110 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 UBE2KP61086 200 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 ID3Q02535 119 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 ICAM4Q14773 271 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 P4HA3Q7Z4N8 544 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 ZNF429Q86V71 674 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 SNIP1Q8TAD8 396 aaKnown RBP10.67□□□□□ -0.7
RNF4-222ENST00000541204 NEK7Q8TDX7 302 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 EDARADDQ8WWZ3 215 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 SPSB4Q96A44 273 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 TECTBQ96PL2 329 aa10.67□□□□□ -0.7
RNF4-222ENST00000541204 ZNF552Q9H707 407 aaPredicted RBP10.67□□□□□ -0.7
RNF4-222ENST00000541204 ZNF732B4DXR9 585 aa10.66□□□□□ -0.7
RNF4-222ENST00000541204 SCAF4O95104 1147 aaKnown RBP10.66□□□□□ -0.7
RNF4-222ENST00000541204 NAPSAO96009 420 aa10.66□□□□□ -0.7
RNF4-222ENST00000541204 VDAC1P21796 283 aa10.66□□□□□ -0.7
RNF4-222ENST00000541204 DLK1P80370 383 aa10.66□□□□□ -0.7
RNF4-222ENST00000541204 Q8WTZ3 238 aa10.66□□□□□ -0.7
RNF4-222ENST00000541204 TMPRSS5Q9H3S3 457 aa10.66□□□□□ -0.7
RNF4-222ENST00000541204 TRBV23-1A0A0A0MS06 115 aa10.66□□□□□ -0.7
RNF4-222ENST00000541204 IGKV1-6A0A0C4DH72 117 aa10.66□□□□□ -0.7
RNF4-222ENST00000541204 H3BP45 60 aa10.66□□□□□ -0.7
RNF4-222ENST00000541204 CXCL1P09341 107 aa10.66□□□□□ -0.7
RNF4-222ENST00000541204 PLP2Q04941 152 aa10.66□□□□□ -0.7
RNF4-222ENST00000541204 RNPS1Q15287 305 aaKnown RBP10.66□□□□□ -0.7
RNF4-222ENST00000541204 AKR1C8PQ5T2L2 129 aa10.66□□□□□ -0.7
RNF4-222ENST00000541204 COLCA1Q6ZS62 124 aa10.66□□□□□ -0.7
RNF4-222ENST00000541204 ZNF488Q96MN9 340 aa10.66□□□□□ -0.7
RNF4-222ENST00000541204 REPIN1Q9BWE0 567 aaKnown RBP10.66□□□□□ -0.7
RNF4-222ENST00000541204 UNKLQ9H9P5 680 aaKnown RBP10.66□□□□□ -0.7
RNF4-222ENST00000541204 RYDENQ9NUL5 291 aaKnown RBP10.66□□□□□ -0.7
RNF4-222ENST00000541204 MGAQ8IWI9 3026 aa10.66□□□□□ -0.7
RNF4-222ENST00000541204 BTBD17A6NE02 478 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 WRBO00258 174 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 WT1P19544 449 aaPredicted RBP10.65□□□□□ -0.7
RNF4-222ENST00000541204 S100PP25815 95 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 UCP1P25874 307 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 CLN3Q13286 438 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 ELOBQ15370 118 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 Q6ZS49 121 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 FDCSPQ8NFU4 85 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 OR8G5Q8NG78 346 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 GNPNAT1Q96EK6 184 aaPredicted RBP10.65□□□□□ -0.7
RNF4-222ENST00000541204 WDYHV1Q96HA8 205 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 MTCH1Q9NZJ7 389 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 TAAR3PQ9P1P4 343 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 WSB1Q9Y6I7 421 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 CLEC18AA5D8T8 446 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 SLC34A2O95436 690 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 IL18BPO95998 194 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 IGHV2-70P01814 119 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 PAX9P55771 341 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 SOX8P57073 446 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 ERVFRD-1P60508 538 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 FGF12P61328 243 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 ZNF674Q2M3X9 581 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 SP5Q6BEB4 398 aaPredicted RBP10.65□□□□□ -0.7
RNF4-222ENST00000541204 CMTM1Q8IZ96 169 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 CLEC18CQ8NCF0 446 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 Q8NFD4 153 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 APOBEC3DQ96AK3 386 aaPredicted RBP10.65□□□□□ -0.7
RNF4-222ENST00000541204 POM121L2Q96KW2 1035 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 GGACTQ9BVM4 153 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 ZMAT5Q9UDW3 170 aaKnown RBP10.65□□□□□ -0.7
RNF4-222ENST00000541204 SVILO95425 2214 aa10.65□□□□□ -0.7
RNF4-222ENST00000541204 MAP1BP46821 2468 aaKnown RBP10.65□□□□□ -0.71
RNF4-222ENST00000541204 A0A0G2JRQ6 117 aa10.65□□□□□ -0.71
RNF4-222ENST00000541204 RD3LP0DJH9 198 aa10.65□□□□□ -0.71
RNF4-222ENST00000541204 NDUFA6P56556 154 aa10.65□□□□□ -0.71
RNF4-222ENST00000541204 RPL23AP62750 156 aaKnown RBP10.65□□□□□ -0.71
RNF4-222ENST00000541204 BAXQ07812 192 aa10.65□□□□□ -0.71
RNF4-222ENST00000541204 NRN1LQ496H8 165 aa10.65□□□□□ -0.71
RNF4-222ENST00000541204 CLDND2Q8NHS1 167 aa10.65□□□□□ -0.71
RNF4-222ENST00000541204 BCL2L14Q9BZR8 327 aa10.65□□□□□ -0.71
RNF4-222ENST00000541204 TOLLIPQ9H0E2 274 aa10.65□□□□□ -0.71
RNF4-222ENST00000541204 RNF115Q9Y4L5 304 aa10.65□□□□□ -0.71
RNF4-222ENST00000541204 TGIF2-C20orf24A0A0A6YYL0 155 aa10.64□□□□□ -0.71
RNF4-222ENST00000541204 FAM90A10PA6NDY2 464 aa10.64□□□□□ -0.71
RNF4-222ENST00000541204 FAM90A18PA6NE21 464 aa10.64□□□□□ -0.71
RNF4-222ENST00000541204 FAM90A16PA6NEW6 464 aa10.64□□□□□ -0.71
RNF4-222ENST00000541204 FAM90A20PA6NIJ5 464 aa10.64□□□□□ -0.71
RNF4-222ENST00000541204 FAM90A8PA6NJQ4 464 aa10.64□□□□□ -0.71
RNF4-222ENST00000541204 FAM90A7PA6NKC0 464 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms