RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 IVDP26440 423 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 S100GP29377 79 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 RFC3P40938 356 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 CRYBB2P43320 205 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 LGALS7P47929 136 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 ZNF181Q2M3W8 571 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 KDM4DQ6B0I6 523 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 Q6ZN92 141 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 C19orf35Q6ZS72 473 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 SSX7Q7RTT5 188 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 OLIG3Q7RTU3 272 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 H2BFWTQ7Z2G1 175 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 SLC36A1Q7Z2H8 476 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 GALNT10Q86SR1 603 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 LRRC28Q86X40 367 aaPredicted RBP3.29□□□□□ -1.88
YBX3-210ENST00000540975 SNX29P2Q8IUI4 249 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 PCP2Q8IVA1 136 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 C10orf107Q8IVU9 208 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 KIR2DL5AQ8N109 375 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 DAW1Q8N136 415 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 LRRC52Q8N7C0 313 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 GDPD1Q8N9F7 314 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 SLC26A10Q8NG04 563 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 OR2Z1Q8NG97 314 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 OR10G2Q8NGC3 310 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 OR6N2Q8NGY6 317 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 OR8U1Q8NH10 309 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 OR51F2Q8NH61 342 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 OR10A6Q8NH74 314 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 FAM110BQ8TC76 370 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 ZFP90Q8TF47 636 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 DEDD2Q8WXF8 326 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 C10orf35Q96D05 121 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 MRPL45Q9BRJ2 306 aaKnown RBP3.29□□□□□ -1.88
YBX3-210ENST00000540975 CCDC32Q9BV29 185 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 NUDT9Q9BW91 350 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 UGT2B28Q9BY64 529 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 TBL1XR1Q9BZK7 514 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 MFSD1Q9H3U5 465 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 CLMPQ9H6B4 373 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 NIPAL2Q9H841 368 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 MCUBQ9NWR8 336 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 FBXL12Q9NXK8 326 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 RASL12Q9NYN1 266 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 ZNF226Q9NYT6 803 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 FBXO5Q9UKT4 447 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 ING4Q9UNL4 249 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 HSPB11Q9Y547 144 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 PEX16Q9Y5Y5 336 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 HEBP2Q9Y5Z4 205 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 V9GYY9 64 aa3.29□□□□□ -1.88
YBX3-210ENST00000540975 SIPA1L1O43166 1804 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 C5P01031 1676 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 TRAV8-7A0A075B6U6 113 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 A0A0G2JND7 137 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 IGSF23A1L1A6 192 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 PRORSD1PA6NEY8 169 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 SMIM9A6NGZ8 99 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 KRBOX1C9JBD0 128 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 TRAPPC2LH3BP13 241 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 DNASE2O00115 360 aaPredicted RBP3.28□□□□□ -1.88
YBX3-210ENST00000540975 GPR31O00270 319 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 TPST1O60507 370 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 SCGNO76038 276 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 GABARAPO95166 117 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 FARS2O95363 451 aaKnown RBP3.28□□□□□ -1.88
YBX3-210ENST00000540975 IFNA17P01571 189 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 MT-ND4P03905 459 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 ALDOBP05062 364 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 ARG1P05089 322 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 CST2P09228 141 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 MYL2P10916 166 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 IL7P13232 177 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 ZNF35P13682 527 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 ABOP16442 354 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 TBPP20226 339 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 OMGP23515 440 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 F2RP25116 425 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 IL12AP29459 219 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 RPA3P35244 121 aaPredicted RBP3.28□□□□□ -1.88
YBX3-210ENST00000540975 QARSP47897 775 aaKnown RBP3.28□□□□□ -1.88
YBX3-210ENST00000540975 GPM6AP51674 278 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 ATP1B3P54709 279 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 OR2B8PP59922 312 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 RRAS2P62070 204 aaPredicted RBP3.28□□□□□ -1.88
YBX3-210ENST00000540975 C2orf80Q0P641 193 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 ECH1Q13011 328 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 KIAA0087Q14695 138 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 TSNQ15631 228 aaKnown RBP3.28□□□□□ -1.88
YBX3-210ENST00000540975 LY6EQ16553 131 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 TMEM183BQ1AE95 376 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 PLPPR5Q32ZL2 321 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 XAF1Q6GPH4 301 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 ZNF773Q6PK81 442 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 CD200R1LQ6Q8B3 271 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 SMARCD3Q6STE5 483 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 TMEM183AQ8IXX5 376 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 TCTE3Q8IZS6 198 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 SMIM20Q8N5G0 67 aa3.28□□□□□ -1.88
YBX3-210ENST00000540975 CYB561D1Q8N8Q1 229 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms