RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 HOXB5P09067 269 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 LRRC37A5PQ49AS3 106 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 KRBOX4Q5JUW0 171 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 STUMQ69YW2 141 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 MOB1BQ7L9L4 216 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 SLC38A6Q8IZM9 456 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 OR52L2PQ8NGH6 319 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 TP53RKQ96S44 253 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 HEXA-AS1Q9H8Q6 139 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 RDH8Q9NYR8 311 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 NDRG3Q9UGV2 375 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 SHPKQ9UHJ6 478 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 PCDHB10Q9UN67 800 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 PPP1R3CQ9UQK1 317 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 RNF115Q9Y4L5 304 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 FXYD6-FXYD2A0A087WZ82 144 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 TUBAL3A6NHL2 446 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 NPIPB11E5RHQ5 1161 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 TNFSF12O43508 249 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 FCN3O75636 299 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 DIRAS3O95661 229 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 HBZP02008 142 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 GYPAP02724 150 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 TNFSF4P23510 183 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 SSTR5P35346 364 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 ABCA11PQ4W5N1 156 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 UTF1Q5T230 341 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 SGPP2Q8IWX5 399 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 OR10J5Q8NHC4 309 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 ITLN2Q8WWU7 325 aaPredicted RBP10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 GAFA1Q96PS6 74 aa10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 CISD1Q9NZ45 108 aaKnown RBP10.23□□□□□ -0.77
AP003559.1-201ENST00000540906 C5orf51A6NDU8 294 aa10.22□□□□□ -0.77
AP003559.1-201ENST00000540906 KCNAB3O43448 404 aa10.22□□□□□ -0.77
AP003559.1-201ENST00000540906 TSC22D2O75157 780 aa10.22□□□□□ -0.77
AP003559.1-201ENST00000540906 HEXAP06865 529 aa10.22□□□□□ -0.77
AP003559.1-201ENST00000540906 CTXN2P0C2S0 81 aa10.22□□□□□ -0.77
AP003559.1-201ENST00000540906 BEX5Q5H9J7 111 aa10.22□□□□□ -0.77
AP003559.1-201ENST00000540906 LPCAT3Q6P1A2 487 aa10.22□□□□□ -0.77
AP003559.1-201ENST00000540906 TBC1D26Q86UD7 250 aa10.22□□□□□ -0.77
AP003559.1-201ENST00000540906 FAM216BQ8N7L0 139 aa10.22□□□□□ -0.77
AP003559.1-201ENST00000540906 COQ8AQ8NI60 647 aa10.22□□□□□ -0.77
AP003559.1-201ENST00000540906 RFESDQ8TAC1 157 aa10.22□□□□□ -0.77
AP003559.1-201ENST00000540906 GLYATL2Q8WU03 294 aa10.22□□□□□ -0.77
AP003559.1-201ENST00000540906 MSI2Q96DH6 328 aaKnown RBP10.22□□□□□ -0.77
AP003559.1-201ENST00000540906 C5orf30Q96GV9 206 aa10.22□□□□□ -0.77
AP003559.1-201ENST00000540906 CCL13Q99616 98 aa10.22□□□□□ -0.77
AP003559.1-201ENST00000540906 PDCD10Q9BUL8 212 aa10.22□□□□□ -0.77
AP003559.1-201ENST00000540906 OR2W1Q9Y3N9 320 aa10.22□□□□□ -0.77
AP003559.1-201ENST00000540906 HRNRQ86YZ3 2850 aaPredicted RBP10.22□□□□□ -0.77
AP003559.1-201ENST00000540906 TANC2Q9HCD6 1990 aa10.22□□□□□ -0.77
AP003559.1-201ENST00000540906 IGHV3-43A0A0B4J1X8 118 aa10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 B8ZZF3 427 aa10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 H0YIZ8 118 aa10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 C15orf65H3BRN8 121 aa10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 H7C1Q1 480 aa10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 C19orf84I3L1E1 186 aa10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 K7N7A8 449 aa10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 RGS13O14921 159 aa10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 MPPED1O15442 326 aa10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 ARPC5O15511 151 aa10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 MPC2O95563 127 aa10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 IGHV3-43DP0DP04 118 aa10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 APOBEC3AP31941 199 aaPredicted RBP10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 C4orf17Q53FE4 359 aa10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 LYZL2Q7Z4W2 148 aa10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 PPP1R1CQ8WVI7 109 aa10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 GALNT14Q96FL9 552 aa10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 SNX22Q96L94 193 aa10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 TMEM204Q9BSN7 226 aa10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 RAB18Q9NP72 206 aa10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 FBXO9Q9UK97 447 aaPredicted RBP10.21□□□□□ -0.77
AP003559.1-201ENST00000540906 DSCAML1Q8TD84 2053 aa10.21□□□□□ -0.78
AP003559.1-201ENST00000540906 A0A1W2PPR1 153 aa10.21□□□□□ -0.78
AP003559.1-201ENST00000540906 GPR31O00270 319 aa10.21□□□□□ -0.78
AP003559.1-201ENST00000540906 PHF1O43189 567 aaPredicted RBP10.21□□□□□ -0.78
AP003559.1-201ENST00000540906 CEACAM6P40199 344 aa10.21□□□□□ -0.78
AP003559.1-201ENST00000540906 IL15RAQ13261 267 aa10.21□□□□□ -0.78
AP003559.1-201ENST00000540906 EFNB3Q15768 340 aa10.21□□□□□ -0.78
AP003559.1-201ENST00000540906 SWI5Q1ZZU3 235 aa10.21□□□□□ -0.78
AP003559.1-201ENST00000540906 ZNF672Q499Z4 452 aaPredicted RBP10.21□□□□□ -0.78
AP003559.1-201ENST00000540906 TEX36Q5VZQ5 186 aa10.21□□□□□ -0.78
AP003559.1-201ENST00000540906 GGNBP1Q5YKI7 109 aa10.21□□□□□ -0.78
AP003559.1-201ENST00000540906 GSG1LQ6UXU4 331 aa10.21□□□□□ -0.78
AP003559.1-201ENST00000540906 TCF23Q7RTU1 214 aa10.21□□□□□ -0.78
AP003559.1-201ENST00000540906 ZNF565Q8N9K5 539 aa10.21□□□□□ -0.78
AP003559.1-201ENST00000540906 OR10V1Q8NGI7 309 aa10.21□□□□□ -0.78
AP003559.1-201ENST00000540906 C18orf12Q96KH6 178 aa10.21□□□□□ -0.78
AP003559.1-201ENST00000540906 SAP30LQ9HAJ7 183 aa10.21□□□□□ -0.78
AP003559.1-201ENST00000540906 SEBOXQ9HB31 216 aaPredicted RBP10.21□□□□□ -0.78
AP003559.1-201ENST00000540906 DYNLRB1Q9NP97 96 aa10.21□□□□□ -0.78
AP003559.1-201ENST00000540906 ODAMA1E959 279 aa10.2□□□□□ -0.78
AP003559.1-201ENST00000540906 OOEPA6NGQ2 149 aa10.2□□□□□ -0.78
AP003559.1-201ENST00000540906 POM121CA8CG34 1229 aa10.2□□□□□ -0.78
AP003559.1-201ENST00000540906 RGS11O94810 467 aa10.2□□□□□ -0.78
AP003559.1-201ENST00000540906 PPP1CCP36873 323 aaKnown RBP10.2□□□□□ -0.78
AP003559.1-201ENST00000540906 RND3P61587 244 aa10.2□□□□□ -0.78
AP003559.1-201ENST00000540906 PAX5Q02548 391 aa10.2□□□□□ -0.78
AP003559.1-201ENST00000540906 LTC4SQ16873 150 aa10.2□□□□□ -0.78
AP003559.1-201ENST00000540906 ZNF788Q6ZQV5 615 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms