RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 ARV1Q9H2C2 271 aa11.65□□□□□ -0.54
RTN3-210ENST00000540798 FAM215AQ9Y5M1 114 aa11.65□□□□□ -0.54
RTN3-210ENST00000540798 SLC25A15Q9Y619 301 aa11.65□□□□□ -0.54
RTN3-210ENST00000540798 POMT1Q9Y6A1 747 aa11.65□□□□□ -0.54
RTN3-210ENST00000540798 P2RY1P47900 373 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 DEFA5Q01523 94 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 SWI5Q1ZZU3 235 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 UQCC3Q6UW78 93 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 BEND4Q6ZU67 534 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 OR1S2Q8NGQ3 325 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 CXXC4Q9H2H0 198 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 FBXL17Q9UF56 701 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 INTS1Q8N201 2190 aaKnown RBP11.64□□□□□ -0.55
RTN3-210ENST00000540798 H0Y980 276 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 PGLYRP1O75594 196 aaPredicted RBP11.64□□□□□ -0.55
RTN3-210ENST00000540798 TMEM33P57088 247 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 MST1LQ2TV78 715 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 NMSQ5H8A3 153 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 GPR157Q5UAW9 335 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 Q6ZR03 302 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 OR5D13Q8NGL4 314 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 OR10J5Q8NHC4 309 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 PRRC2CQ9Y520 2896 aaKnown RBP11.64□□□□□ -0.55
RTN3-210ENST00000540798 SIRPB1O00241 398 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 SH2D1BO14796 132 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 GPR137BO60478 399 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 NXPH2O95156 264 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 HMGN3Q15651 99 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 EIF2S3LQ2VIR3 472 aaKnown RBP11.64□□□□□ -0.55
RTN3-210ENST00000540798 ABHD14BQ96IU4 210 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 KIRREL1Q96J84 757 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 SMIM8Q96KF7 97 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 TAF9BQ9HBM6 251 aa11.64□□□□□ -0.55
RTN3-210ENST00000540798 RCL1Q9Y2P8 373 aaKnown RBP11.64□□□□□ -0.55
RTN3-210ENST00000540798 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.63□□□□□ -0.55
RTN3-210ENST00000540798 A0A1B0GV90 55 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 NUDT19A8MXV4 375 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 ST8SIA3O43173 380 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 SCGB1D2O95969 90 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 IGLV2-14P01704 120 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 MEX3BQ6ZN04 569 aaKnown RBP11.63□□□□□ -0.55
RTN3-210ENST00000540798 UBAC2Q8NBM4 344 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 TAS2R3Q9NYW6 316 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 LPAR3Q9UBY5 353 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 WASF3Q9UPY6 502 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 SSUH2Q9Y2M2 353 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 UBE2J1Q9Y385 318 aaPredicted RBP11.63□□□□□ -0.55
RTN3-210ENST00000540798 NKX2-6A6NCS4 301 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 HSD17B6O14756 317 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 JTBO76095 146 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 PLA2G5P39877 138 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 TESK1Q15569 626 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 C3orf36Q3SXR2 165 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 C9orf152Q5JTZ5 239 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 CMTM1Q8IZ96 169 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 ERGIC1Q969X5 290 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 SAT2Q96F10 170 aaPredicted RBP11.63□□□□□ -0.55
RTN3-210ENST00000540798 AKAP13Q12802 2813 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 CNOT1A5YKK6 2376 aaKnown RBP11.63□□□□□ -0.55
RTN3-210ENST00000540798 GTF3C1Q12789 2109 aa11.63□□□□□ -0.55
RTN3-210ENST00000540798 K7EM74 188 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 HAND1O96004 215 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 GRPP07492 148 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 PRR7Q8TB68 274 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 OR1A1Q9P1Q5 309 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 H7C2Y5 167 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 TIMP3P35625 211 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 ZNF718Q3SXZ3 478 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 C1orf185Q5T7R7 199 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 ZNF695Q8IW36 515 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 OR2S2Q9NQN1 319 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 ASF1BQ9NVP2 202 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 PLA2G2EQ9NZK7 142 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 TAAR3PQ9P1P4 343 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 F2RP25116 425 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 CASP6P55212 293 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 EIF5AL1Q6IS14 154 aaKnown RBP11.62□□□□□ -0.55
RTN3-210ENST00000540798 ZNF474Q6S9Z5 364 aaPredicted RBP11.62□□□□□ -0.55
RTN3-210ENST00000540798 WDR82Q6UXN9 313 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 OR10V1Q8NGI7 309 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 BSCL2Q96G97 398 aaPredicted RBP11.62□□□□□ -0.55
RTN3-210ENST00000540798 SPIN2AQ99865 258 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 SPIN2BQ9BPZ2 258 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 MIOXQ9UGB7 285 aa11.62□□□□□ -0.55
RTN3-210ENST00000540798 CRYABP02511 175 aaKnown RBP11.61□□□□□ -0.55
RTN3-210ENST00000540798 HEXAP06865 529 aa11.61□□□□□ -0.55
RTN3-210ENST00000540798 SULT1A2P50226 295 aa11.61□□□□□ -0.55
RTN3-210ENST00000540798 ACP7Q6ZNF0 438 aa11.61□□□□□ -0.55
RTN3-210ENST00000540798 BPIFCQ8NFQ6 507 aa11.61□□□□□ -0.55
RTN3-210ENST00000540798 ERRFI1Q9UJM3 462 aaPredicted RBP11.61□□□□□ -0.55
RTN3-210ENST00000540798 KLK10O43240 276 aa11.61□□□□□ -0.55
RTN3-210ENST00000540798 VDAC1P21796 283 aa11.61□□□□□ -0.55
RTN3-210ENST00000540798 GPHA2Q96T91 129 aa11.61□□□□□ -0.55
RTN3-210ENST00000540798 TOLLIPQ9H0E2 274 aa11.61□□□□□ -0.55
RTN3-210ENST00000540798 WFDC1Q9HC57 220 aa11.61□□□□□ -0.55
RTN3-210ENST00000540798 MMP26Q9NRE1 261 aa11.61□□□□□ -0.55
RTN3-210ENST00000540798 CHD3Q12873 2000 aaKnown RBP11.6□□□□□ -0.55
RTN3-210ENST00000540798 TIMM8AO60220 97 aaPredicted RBP11.6□□□□□ -0.55
RTN3-210ENST00000540798 PSPNO60542 156 aa11.6□□□□□ -0.55
RTN3-210ENST00000540798 PTBP3O95758 552 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms