RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	PHF1	O43189	567 aa	Predicted RBP	4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SPRY1	O43609	319 aa	Predicted RBP	4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ZNF728	P0DKX0	622 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	UCP2	P55851	309 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	AKR1C8P	Q5T2L2	129 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ZNF880	Q6PDB4	577 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	COMMD1	Q8N668	190 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	GJC3	Q8NFK1	279 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	OR10AD1	Q8NGE0	317 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	OR6X1	Q8NH79	312 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FAM222B	Q8WU58	562 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PGAM5	Q96HS1	289 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PRDM14	Q9GZV8	571 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ARV1	Q9H2C2	271 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HSF4	Q9ULV5	492 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ATP23	Q9Y6H3	246 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TMEM131	Q92545	1883 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ST8SIA3	O43173	380 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SCAF4	O95104	1147 aa	Known RBP	4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CTSD	P07339	412 aa	Predicted RBP	4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SRP19	P09132	144 aa	Known RBP	4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	MMP9	P14780	707 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	G0S2	P27469	103 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	WDYHV1	Q96HA8	205 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	LURAP1	Q96LR2	239 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PACRG	Q96M98	296 aa	Predicted RBP	4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FBLN5	Q9UBX5	448 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	IGF2R	P11717	2491 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CYTIP	O60759	359 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	IL2RG	P31785	369 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	EWSR1	Q01844	656 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ZP4	Q12836	540 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HNF4G	Q14541	408 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TMEM187	Q14656	261 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SPSB3	Q6PJ21	355 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	MRPL21	Q7Z2W9	205 aa	Known RBP	4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	NOXO1	Q8NFA2	376 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	LYZL4	Q96KX0	146 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	DEPP	Q9NTK1	212 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	STRAP	Q9Y3F4	350 aa	Known RBP	4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	WSB1	Q9Y6I7	421 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SDK2	Q58EX2	2172 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FAM230A	A0A1W2PPH8	454 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	IGSF23	A1L1A6	192 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	NKX2-6	A6NCS4	301 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TSTD3	H0UI37	97 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	EFNA2	O43921	213 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ZIC3	O60481	467 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	RFPL3S	P0C7P2	107 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	EPHA1	P21709	976 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	RAB11A	P62491	216 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	RPL23A	P62750	156 aa	Known RBP	4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CEACAM16	Q2WEN9	425 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HIKESHI	Q53FT3	197 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CRIP3	Q6Q6R5	217 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SLC22A25	Q6T423	547 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	NUFIP2	Q7Z417	695 aa	Known RBP	4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	STX12	Q86Y82	276 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	LRRC18	Q8N456	261 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TMEM171	Q8WVE6	324 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	BOD1	Q96IK1	185 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FAM210B	Q96KR6	192 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FOXB1	Q99853	325 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	NAA60	Q9H7X0	242 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	GPR173	Q9NS66	373 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ANXA10	Q9UJ72	324 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SMCO3	A2RU48	225 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SSSCA1	O60232	199 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SOX15	O60248	233 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	IGHM	P01871	453 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TUBG1	P23258	451 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TAS2R60	P59551	318 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PKIA	P61925	76 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	GNMT	Q14749	295 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PPA1	Q15181	289 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	C9orf135	Q5VTT2	229 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FAM89B	Q8N5H3	189 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SLC35G3	Q8N808	338 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	NECAP1	Q8NC96	275 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TMEM45B	Q96B21	275 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TVP23C	Q96ET8	276 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HIST1H2BL	Q99880	126 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	NIPSNAP3B	Q9BS92	247 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	GNG13	Q9P2W3	67 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PIGL	Q9Y2B2	252 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	IGHV3-15	A0A0B4J1V0	119 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783		A0A1W2PNV4	684 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ZFP92	A6NM28	416 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783		H3BP45	60 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783		M0R1B8	84 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TCAP	O15273	167 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FUT3	P21217	361 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	LHX2	P50458	406 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	GRB2	P62993	217 aa	Known RBP	4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FOXO1	Q12778	655 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ICAM4	Q14773	271 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FAM189A2	Q15884	450 aa		4.86	□□□□□ -1.63

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