RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 ERGP11308 486 aa8.15□□□□□ -1.1
CLIP1-214ENST00000540539 DUSP1P28562 367 aa8.15□□□□□ -1.1
CLIP1-214ENST00000540539 OPRM1P35372 400 aa8.15□□□□□ -1.1
CLIP1-214ENST00000540539 BSGP35613 385 aa8.15□□□□□ -1.1
CLIP1-214ENST00000540539 RPS27P42677 84 aaKnown RBP8.15□□□□□ -1.1
CLIP1-214ENST00000540539 PLP1P60201 277 aa8.15□□□□□ -1.1
CLIP1-214ENST00000540539 PPP1CBP62140 327 aa8.15□□□□□ -1.1
CLIP1-214ENST00000540539 CD226Q15762 336 aa8.15□□□□□ -1.1
CLIP1-214ENST00000540539 LCN15Q6UWW0 184 aa8.15□□□□□ -1.1
CLIP1-214ENST00000540539 TMEM25Q86YD3 366 aa8.15□□□□□ -1.1
CLIP1-214ENST00000540539 PIP4P2Q8N4L2 257 aa8.15□□□□□ -1.1
CLIP1-214ENST00000540539 ARHGEF39Q8N4T4 335 aa8.15□□□□□ -1.1
CLIP1-214ENST00000540539 OR10G3Q8NGC4 313 aa8.15□□□□□ -1.1
CLIP1-214ENST00000540539 OR4A5Q8NH83 315 aa8.15□□□□□ -1.1
CLIP1-214ENST00000540539 GNPNAT1Q96EK6 184 aaPredicted RBP8.15□□□□□ -1.1
CLIP1-214ENST00000540539 SIGLEC12Q96PQ1 595 aa8.15□□□□□ -1.1
CLIP1-214ENST00000540539 CHRDL1Q9BU40 450 aa8.15□□□□□ -1.1
CLIP1-214ENST00000540539 PLA2G2FQ9BZM2 168 aa8.15□□□□□ -1.1
CLIP1-214ENST00000540539 CLEC4EQ9ULY5 219 aa8.15□□□□□ -1.1
CLIP1-214ENST00000540539 ANAPC10Q9UM13 185 aa8.15□□□□□ -1.1
CLIP1-214ENST00000540539 SLC22A13Q9Y226 551 aa8.15□□□□□ -1.1
CLIP1-214ENST00000540539 ST8SIA3O43173 380 aa8.15□□□□□ -1.11
CLIP1-214ENST00000540539 AMTP48728 403 aa8.15□□□□□ -1.11
CLIP1-214ENST00000540539 YPEL3P61236 119 aaPredicted RBP8.15□□□□□ -1.11
CLIP1-214ENST00000540539 CDKN3Q16667 212 aa8.15□□□□□ -1.11
CLIP1-214ENST00000540539 LY6G5CQ5SRR4 150 aa8.15□□□□□ -1.11
CLIP1-214ENST00000540539 LCN12Q6JVE5 192 aa8.15□□□□□ -1.11
CLIP1-214ENST00000540539 TSTD1Q8NFU3 115 aa8.15□□□□□ -1.11
CLIP1-214ENST00000540539 IRF7Q92985 503 aa8.15□□□□□ -1.11
CLIP1-214ENST00000540539 PPP1R14AQ96A00 147 aa8.15□□□□□ -1.11
CLIP1-214ENST00000540539 ELSPBP1Q96BH3 223 aa8.15□□□□□ -1.11
CLIP1-214ENST00000540539 TSSK2Q96PF2 358 aa8.15□□□□□ -1.11
CLIP1-214ENST00000540539 RPP25Q9BUL9 199 aaKnown RBP8.15□□□□□ -1.11
CLIP1-214ENST00000540539 PLXNA2O75051 1894 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 GOLGA4Q13439 2230 aaKnown RBP8.14□□□□□ -1.11
CLIP1-214ENST00000540539 IGLV3-16A0A075B6K0 115 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 CD5LO43866 347 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 NGFRP08138 427 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 IGLL1P15814 213 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 IGFBP3P17936 291 aaPredicted RBP8.14□□□□□ -1.11
CLIP1-214ENST00000540539 FSTP19883 344 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 FBLP22087 321 aaKnown RBP8.14□□□□□ -1.11
CLIP1-214ENST00000540539 MRPS34P82930 218 aaKnown RBP8.14□□□□□ -1.11
CLIP1-214ENST00000540539 TLE1Q04724 770 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 LTC4SQ16873 150 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 ZNF776Q68DI1 518 aaPredicted RBP8.14□□□□□ -1.11
CLIP1-214ENST00000540539 SLC18B1Q6NT16 456 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 TMEM64Q6YI46 380 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 RFLNAQ6ZTI6 216 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 YAF2Q8IY57 180 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 BOD1L2Q8IYS8 172 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 LGI3Q8N145 548 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 OR2C3Q8N628 320 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 CCDC71LQ8N9Z2 235 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 MAFAQ8NHW3 353 aaPredicted RBP8.14□□□□□ -1.11
CLIP1-214ENST00000540539 ZNF480Q8WV37 535 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 DHDHQ9UQ10 334 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 SPACA6W5XKT8 324 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 SCN2AQ99250 2005 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 DOCK11Q5JSL3 2073 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 GLOD5A6NK44 160 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 OR11H12B2RN74 326 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 C2CD4DB7Z1M9 353 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 RHBDL1O75783 438 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 AGFG2O95081 481 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 GYPAP02724 150 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 SLC35E2P0CK97 266 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 CBLN1P23435 193 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 RRADP55042 308 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 TFF2Q03403 129 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 DUSP2Q05923 314 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 IGFBP7Q16270 282 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 C1orf100Q5SVJ3 147 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 GTF2H5Q6ZYL4 71 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 SLC16A11Q8NCK7 471 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 OR11H1Q8NG94 326 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 OR10V1Q8NGI7 309 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 OR11H2Q8NH07 326 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 SLC25A40Q8TBP6 338 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 BLNKQ8WV28 456 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 LIN37Q96GY3 246 aaPredicted RBP8.14□□□□□ -1.11
CLIP1-214ENST00000540539 C12orf49Q9H741 205 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 PLEKHF2Q9H8W4 249 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 LHX3Q9UBR4 397 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 PSG8Q9UQ74 426 aa8.14□□□□□ -1.11
CLIP1-214ENST00000540539 F5P12259 2224 aa8.13□□□□□ -1.11
CLIP1-214ENST00000540539 KIF26BQ2KJY2 2108 aa8.13□□□□□ -1.11
CLIP1-214ENST00000540539 TRAV9-2A0A087WT02 112 aa8.13□□□□□ -1.11
CLIP1-214ENST00000540539 GAGE12HA6NDE8 117 aa8.13□□□□□ -1.11
CLIP1-214ENST00000540539 P2RY10O00398 339 aa8.13□□□□□ -1.11
CLIP1-214ENST00000540539 SIVA1O15304 175 aa8.13□□□□□ -1.11
CLIP1-214ENST00000540539 PDE6DO43924 150 aa8.13□□□□□ -1.11
CLIP1-214ENST00000540539 NDUFB2O95178 105 aa8.13□□□□□ -1.11
CLIP1-214ENST00000540539 CNIH1O95406 144 aa8.13□□□□□ -1.11
CLIP1-214ENST00000540539 GATA2P23769 480 aaPredicted RBP8.13□□□□□ -1.11
CLIP1-214ENST00000540539 NTSR1P30989 418 aa8.13□□□□□ -1.11
CLIP1-214ENST00000540539 ARF3P61204 181 aaPredicted RBP8.13□□□□□ -1.11
CLIP1-214ENST00000540539 ZNF726P1Q15940 193 aa8.13□□□□□ -1.11
CLIP1-214ENST00000540539 CDCP2Q5VXM1 449 aa8.13□□□□□ -1.11
CLIP1-214ENST00000540539 STUMQ69YW2 141 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms