RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 RPL22L1Q6P5R6 122 aaKnown RBP9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 ZNF497Q6ZNH5 498 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 SLC25A48Q6ZT89 311 aaKnown RBP9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 RHOXF1Q8NHV9 184 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 MYOZ3Q8TDC0 251 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 PYDC1Q8WXC3 89 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 RGP1Q92546 391 aaPredicted RBP9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 TMEM106AQ96A25 262 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 PRR25Q96S07 402 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 S100A13Q99584 98 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 SPACA1Q9HBV2 294 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 CHCHD3Q9NX63 227 aaKnown RBP9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 ZNF581Q9P0T4 197 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 ING4Q9UNL4 249 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 ZNF256Q9Y2P7 627 aaPredicted RBP9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 RPL36Q9Y3U8 105 aaKnown RBP9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 AIPO00170 330 aa9.38□□□□□ -0.91
CBX3P4-202ENST00000540428 LIMS3P0CW19 117 aa9.38□□□□□ -0.91
CBX3P4-202ENST00000540428 LIMS4P0CW20 117 aa9.38□□□□□ -0.91
CBX3P4-202ENST00000540428 GTF2F2P13984 249 aa9.38□□□□□ -0.91
CBX3P4-202ENST00000540428 SERPINA2P20848 420 aa9.38□□□□□ -0.91
CBX3P4-202ENST00000540428 VHLP40337 213 aa9.38□□□□□ -0.91
CBX3P4-202ENST00000540428 GTF2A1P52655 376 aaPredicted RBP9.38□□□□□ -0.91
CBX3P4-202ENST00000540428 GPR176Q14439 515 aa9.38□□□□□ -0.91
CBX3P4-202ENST00000540428 ATAD3CQ5T2N8 411 aa9.38□□□□□ -0.91
CBX3P4-202ENST00000540428 DDI2Q5TDH0 399 aa9.38□□□□□ -0.91
CBX3P4-202ENST00000540428 STX19Q8N4C7 294 aa9.38□□□□□ -0.91
CBX3P4-202ENST00000540428 ZNF439Q8NDP4 499 aa9.38□□□□□ -0.91
CBX3P4-202ENST00000540428 OR52I1Q8NGK6 324 aa9.38□□□□□ -0.91
CBX3P4-202ENST00000540428 KCTD7Q96MP8 289 aa9.38□□□□□ -0.91
CBX3P4-202ENST00000540428 HSPB9Q9BQS6 159 aa9.38□□□□□ -0.91
CBX3P4-202ENST00000540428 AMBNQ9NP70 447 aa9.38□□□□□ -0.91
CBX3P4-202ENST00000540428 RCC2Q9P258 522 aaKnown RBP9.38□□□□□ -0.91
CBX3P4-202ENST00000540428 IGHV3-43A0A0B4J1X8 118 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 ZNF736B4DX44 427 aaPredicted RBP9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 H3BNX3 289 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 SPINT2O43291 252 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 IGHV3-43DP0DP04 118 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 BDKRB2P30411 391 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 F2RL1P55085 397 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 RUNX1Q01196 453 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 ZNF260Q3ZCT1 412 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 C6orf183Q5T699 404 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 ZFP1Q6P2D0 407 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 TRAT1Q6PIZ9 186 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 GAPTQ8N292 157 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 CBR4Q8N4T8 237 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 OR11H1Q8NG94 326 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 NEK7Q8TDX7 302 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 CCDC107Q8WV48 283 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 MRPS24Q96EL2 167 aaKnown RBP9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 UBE2E2Q96LR5 201 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 FAM53CQ9NYF3 392 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 GNG12Q9UBI6 72 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 ZNF107Q9UII5 783 aaPredicted RBP9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 TRAPPC2LQ9UL33 140 aa9.37□□□□□ -0.91
CBX3P4-202ENST00000540428 C12orf77C9JDV5 145 aa9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 MCRIP1C9JLW8 97 aa9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 SLC31A2O15432 143 aa9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 LANCL1O43813 399 aa9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 CA11O75493 328 aa9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 GPX5O75715 221 aa9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 OR8U8P0C7N1 319 aa9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 IGFBP3P17936 291 aaPredicted RBP9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 PPIFP30405 207 aaKnown RBP9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 ZNF134P52741 427 aa9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 RIPK1Q13546 671 aa9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 SLC22A6Q4U2R8 563 aa9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 CT45A1Q5HYN5 189 aa9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 XAF1Q6GPH4 301 aa9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 FAM53AQ6NSI3 398 aaPredicted RBP9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 CT45A3Q8NHU0 189 aa9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 UBALD1Q8TB05 177 aa9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 SMIM19Q96E16 107 aa9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 FGF20Q9NP95 211 aaPredicted RBP9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 SMAD5-AS1Q9Y6J3 95 aa9.36□□□□□ -0.91
CBX3P4-202ENST00000540428 LOC100130705A0A1B0GUX0 176 aa9.35□□□□□ -0.91
CBX3P4-202ENST00000540428 A0A1W2PP11 408 aa9.35□□□□□ -0.91
CBX3P4-202ENST00000540428 I3L521 148 aa9.35□□□□□ -0.91
CBX3P4-202ENST00000540428 OGG1O15527 345 aa9.35□□□□□ -0.91
CBX3P4-202ENST00000540428 DCKP27707 260 aa9.35□□□□□ -0.91
CBX3P4-202ENST00000540428 ZNF616Q08AN1 781 aa9.35□□□□□ -0.91
CBX3P4-202ENST00000540428 LSAMPQ13449 338 aa9.35□□□□□ -0.91
CBX3P4-202ENST00000540428 KIAA0141Q14154 515 aaPredicted RBP9.35□□□□□ -0.91
CBX3P4-202ENST00000540428 SYT6Q5T7P8 510 aaPredicted RBP9.35□□□□□ -0.91
CBX3P4-202ENST00000540428 TMEM65Q6PI78 240 aa9.35□□□□□ -0.91
CBX3P4-202ENST00000540428 TMPRSS11AQ6ZMR5 421 aa9.35□□□□□ -0.91
CBX3P4-202ENST00000540428 ZNF554Q86TJ5 538 aa9.35□□□□□ -0.91
CBX3P4-202ENST00000540428 ZNF491Q8N8L2 437 aa9.35□□□□□ -0.91
CBX3P4-202ENST00000540428 APH1BQ8WW43 257 aa9.35□□□□□ -0.91
CBX3P4-202ENST00000540428 ZNF184Q99676 751 aaPredicted RBP9.35□□□□□ -0.91
CBX3P4-202ENST00000540428 ASCL2Q99929 193 aa9.35□□□□□ -0.91
CBX3P4-202ENST00000540428 C9orf16Q9BUW7 83 aa9.35□□□□□ -0.91
CBX3P4-202ENST00000540428 ETAA1Q9NY74 926 aa9.35□□□□□ -0.91
CBX3P4-202ENST00000540428 VSIG4Q9Y279 399 aa9.35□□□□□ -0.91
CBX3P4-202ENST00000540428 TRBV5-5A0A0J9YX44 114 aa9.34□□□□□ -0.91
CBX3P4-202ENST00000540428 FAM90A10PA6NDY2 464 aa9.34□□□□□ -0.91
CBX3P4-202ENST00000540428 FAM90A7PA6NKC0 464 aa9.34□□□□□ -0.91
CBX3P4-202ENST00000540428 FAM90A23PA8MXZ1 464 aa9.34□□□□□ -0.91
CBX3P4-202ENST00000540428 DYNC1I1O14576 645 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms