RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 A0A087X0M5 115 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 A0A1B0GX30 115 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 ERVFC1-1P60608 527 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 PARP11Q9NR21 331 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 RCC2Q9P258 522 aaKnown RBP8.66□□□□□ -1.02
TRAF1-202ENST00000540010 TRAPPC1Q9Y5R8 145 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 POMT1Q9Y6A1 747 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 MED13LQ71F56 2210 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 ETV2O00321 342 aaPredicted RBP8.66□□□□□ -1.02
TRAF1-202ENST00000540010 TGOLN2O43493 480 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 DKK1O94907 266 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 OPN1MWP04001 364 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 OPN1MW2P0DN77 364 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 OPN1MW3P0DN78 364 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 IL22RA2Q969J5 263 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 MARVELD3Q96A59 401 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 TRIB1Q96RU8 372 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 C5orf66Q9H5L9 145 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 IL17BQ9UHF5 180 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 SSUH2Q9Y2M2 353 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 CADP27708 2225 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 TNRC6BQ9UPQ9 1833 aaKnown RBP8.66□□□□□ -1.02
TRAF1-202ENST00000540010 LOC101059948A0A1B0GTJ6 334 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 MSGN1A6NI15 193 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 SYNGR2O43760 224 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 SMIM6P0DI80 62 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 MMP9P14780 707 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 DTYMKP23919 212 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 LSM6P62312 80 aaKnown RBP8.66□□□□□ -1.02
TRAF1-202ENST00000540010 NAAAQ02083 359 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 DCAF10Q5QP82 559 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 ABHD3Q8WU67 409 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 SOX7Q9BT81 388 aa8.66□□□□□ -1.02
TRAF1-202ENST00000540010 ATRXP46100 2492 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 SPAARA0A1B0GVQ0 90 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 SEC14L6B5MCN3 397 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 OR3A1P47881 315 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 P2RY1P47900 373 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 OR1C1Q15619 314 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 RNF151Q2KHN1 245 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 BSXQ3C1V8 233 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 SLC36A1Q7Z2H8 476 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 CYB561D1Q8N8Q1 229 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 OR5B3Q8NH48 314 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 MRGPRFQ96AM1 343 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 CIB3Q96Q77 187 aaPredicted RBP8.65□□□□□ -1.02
TRAF1-202ENST00000540010 S1PR3Q99500 378 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 CHST5Q9GZS9 411 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 COL5A1P20908 1838 aaPredicted RBP8.65□□□□□ -1.02
TRAF1-202ENST00000540010 TRBV23-1A0A0A0MS06 115 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 TRAV34A0A0B4J273 112 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 M0R1X1 148 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 FCGR3BO75015 233 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 RFPL3SP0C7P2 107 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 SEC11BP0C7V7 166 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 PMCHP20382 165 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 RAC3P60763 192 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 PPP1CBP62140 327 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 HIST1H3AP68431 136 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 ACSM6Q6P461 480 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 TMPRSS7Q7RTY8 843 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 WDFY1Q8IWB7 410 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 ZNF383Q8NA42 475 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 KCNIP2Q9NS61 270 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 PSG11Q9UQ72 335 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 STARD10Q9Y365 291 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 KCNMB2Q9Y691 235 aa8.65□□□□□ -1.02
TRAF1-202ENST00000540010 INTS1Q8N201 2190 aaKnown RBP8.65□□□□□ -1.02
TRAF1-202ENST00000540010 SULT1A2P50226 295 aa8.65□□□□□ -1.03
TRAF1-202ENST00000540010 C1orf100Q5SVJ3 147 aa8.65□□□□□ -1.03
TRAF1-202ENST00000540010 FAM78BQ5VT40 261 aa8.65□□□□□ -1.03
TRAF1-202ENST00000540010 MYPOPQ86VE0 399 aaPredicted RBP8.65□□□□□ -1.03
TRAF1-202ENST00000540010 OR10G4Q8NGN3 311 aa8.65□□□□□ -1.03
TRAF1-202ENST00000540010 OR10G9Q8NGN4 311 aa8.65□□□□□ -1.03
TRAF1-202ENST00000540010 OR10G7Q8NGN6 311 aa8.65□□□□□ -1.03
TRAF1-202ENST00000540010 PTX4Q96A99 478 aa8.65□□□□□ -1.03
TRAF1-202ENST00000540010 MEGF10Q96KG7 1140 aa8.65□□□□□ -1.03
TRAF1-202ENST00000540010 ZNF586Q9NXT0 402 aa8.65□□□□□ -1.03
TRAF1-202ENST00000540010 UBE2G1P62253 170 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 TEX30Q5JUR7 227 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 FDX2Q6P4F2 183 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 DHRS11Q6UWP2 260 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 IP6K3Q96PC2 410 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 MS4A10Q96PG2 267 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 FAM173AQ9BQD7 235 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 MRPL13Q9BYD1 178 aaKnown RBP8.64□□□□□ -1.03
TRAF1-202ENST00000540010 PROK2Q9HC23 129 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 MPTX1A8MV57 137 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 FSTP19883 344 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 ZNF92Q03936 586 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 SCGB2A2Q13296 93 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 Q3ZCU0 254 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 VAX1Q5SQQ9 334 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 MRGPRDQ8TDS7 321 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 CA5BP1Q8WTZ4 195 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 ZNF488Q96MN9 340 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 OR2D2Q9H210 308 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.64□□□□□ -1.03
TRAF1-202ENST00000540010 SLC22A20A6NK97 555 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 CLN5O75503 358 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms