RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 OR51B6Q9H340 312 aa4.96□□□□□ -1.62
CPSF7-219ENST00000539952 C16orf95Q9H693 158 aa4.96□□□□□ -1.62
CPSF7-219ENST00000539952 ELOVL3Q9HB03 270 aa4.96□□□□□ -1.62
CPSF7-219ENST00000539952 TNFRSF19Q9NS68 423 aa4.96□□□□□ -1.62
CPSF7-219ENST00000539952 ZFP57Q9NU63 452 aa4.96□□□□□ -1.62
CPSF7-219ENST00000539952 TMEM100Q9NV29 134 aa4.96□□□□□ -1.62
CPSF7-219ENST00000539952 DNAJB11Q9UBS4 358 aa4.96□□□□□ -1.62
CPSF7-219ENST00000539952 FBLN5Q9UBX5 448 aa4.96□□□□□ -1.62
CPSF7-219ENST00000539952 ZMAT5Q9UDW3 170 aaKnown RBP4.96□□□□□ -1.62
CPSF7-219ENST00000539952 IL19Q9UHD0 177 aa4.96□□□□□ -1.62
CPSF7-219ENST00000539952 HHLA2Q9UM44 414 aa4.96□□□□□ -1.62
CPSF7-219ENST00000539952 SOX21Q9Y651 276 aaPredicted RBP4.96□□□□□ -1.62
CPSF7-219ENST00000539952 TRAV14DV4A0A0A6YYC5 116 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 TRAV40A0A0B4J280 105 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 TMEM272A0A1B0GTI8 110 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 C9orf170A2RU37 121 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 A6NIZ1 184 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 P2RY10O00398 339 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 TNFRSF13BO14836 293 aaPredicted RBP4.95□□□□□ -1.62
CPSF7-219ENST00000539952 FSTL3O95633 263 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 HLA-AP01891 365 aaKnown RBP4.95□□□□□ -1.62
CPSF7-219ENST00000539952 OPN1MWP04001 364 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 ZNF735P0CB33 412 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 OPN1MW2P0DN77 364 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 OPN1MW3P0DN78 364 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 LYL1P12980 280 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 IGFBP3P17936 291 aaPredicted RBP4.95□□□□□ -1.62
CPSF7-219ENST00000539952 HSD11B1P28845 292 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 AQP2P41181 271 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 RAP1BP61224 184 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 RPL27P61353 136 aaKnown RBP4.95□□□□□ -1.62
CPSF7-219ENST00000539952 RAP1AP62834 184 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 GLO1Q04760 184 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 PJVKQ0ZLH3 352 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 DHRS2Q13268 280 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 LY6G6FQ5SQ64 297 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 ATPAF1Q5TC12 328 aaPredicted RBP4.95□□□□□ -1.62
CPSF7-219ENST00000539952 CATSPERDQ86XM0 798 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 ARRDC1Q8N5I2 433 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 C15orf54Q8N8G6 183 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 OR5AP2Q8NGF4 316 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 SLC25A40Q8TBP6 338 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 RASD2Q96D21 266 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 NEIL1Q96FI4 390 aaPredicted RBP4.95□□□□□ -1.62
CPSF7-219ENST00000539952 POM121L2Q96KW2 1035 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 OR2J1Q9GZK6 312 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 TXNIPQ9H3M7 391 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 SAV1Q9H4B6 383 aaPredicted RBP4.95□□□□□ -1.62
CPSF7-219ENST00000539952 TUBA4BQ9H853 241 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 CHMP1AQ9HD42 196 aaPredicted RBP4.95□□□□□ -1.62
CPSF7-219ENST00000539952 RAB18Q9NP72 206 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 VSX1Q9NZR4 365 aaPredicted RBP4.95□□□□□ -1.62
CPSF7-219ENST00000539952 GTF2A1LQ9UNN4 478 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 B9D1Q9UPM9 204 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 PPP1R3CQ9UQK1 317 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 ADAM18Q9Y3Q7 739 aa4.95□□□□□ -1.62
CPSF7-219ENST00000539952 IGKV1D-42A0A075B6H8 117 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 TRAV8-7A0A075B6U6 113 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 MDFIC2A0A1B0GVS7 189 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 C5orf49A4QMS7 147 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 NPIPB13A6NJU9 1138 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 CEACAM18A8MTB9 384 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 NPIPB4C9JG80 1138 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 C11orf98E9PRG8 122 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 G3V4G9 280 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 TMEM178BH3BS89 294 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 LDLRAD4O15165 306 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 TIMM8AO60220 97 aaPredicted RBP4.94□□□□□ -1.62
CPSF7-219ENST00000539952 GPR137BO60478 399 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 TSPAN15O95858 294 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 IGHG1P01857 330 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 MMP7P09237 267 aaPredicted RBP4.94□□□□□ -1.62
CPSF7-219ENST00000539952 RPS2P15880 293 aaKnown RBP4.94□□□□□ -1.62
CPSF7-219ENST00000539952 ZNF823P16415 610 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 MPV17P39210 176 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 GUCA1AP43080 201 aaPredicted RBP4.94□□□□□ -1.62
CPSF7-219ENST00000539952 IER3P46695 156 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 LUMP51884 338 aaPredicted RBP4.94□□□□□ -1.62
CPSF7-219ENST00000539952 CLRN1P58418 232 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 PPP1CBP62140 327 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 RPL18Q07020 188 aaKnown RBP4.94□□□□□ -1.62
CPSF7-219ENST00000539952 PSG7Q13046 419 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 HIST3H3Q16695 136 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 ZNF260Q3ZCT1 412 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 CDNFQ49AH0 187 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 TMEM128Q5BJH2 165 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 FAM76BQ5HYJ3 339 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 WDR38Q5JTN6 314 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 RUSC1-AS1Q66K80 236 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 ZNF774Q6NX45 483 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 FAAP20Q6NZ36 180 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 PRSS54Q6PEW0 395 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 BRD3OSQ6XYD6 125 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 DPY19L4Q7Z388 723 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 TMED4Q7Z7H5 227 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 LSRQ86X29 649 aaPredicted RBP4.94□□□□□ -1.62
CPSF7-219ENST00000539952 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.94□□□□□ -1.62
CPSF7-219ENST00000539952 PRSS35Q8N3Z0 413 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 LRRC18Q8N456 261 aa4.94□□□□□ -1.62
CPSF7-219ENST00000539952 ZNF561Q8N587 486 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 214.7 ms