RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 PDZD2O15018 2839 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 A0A087X0M5 115 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 IGLV3-32A0A0A0MS00 114 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 IGKV1-9A0A0C4DH69 117 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 A0A1B0GWJ7 208 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 A0A1B0GX30 115 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 SMCO3A2RU48 225 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 LIPT2A6NK58 231 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 SDCBPO00560 298 aaPredicted RBP6.58□□□□□ -1.36
CCDC60-204ENST00000539847 PHOX2AO14813 284 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 SCAF4O95104 1147 aaKnown RBP6.58□□□□□ -1.36
CCDC60-204ENST00000539847 KNG1P01042 644 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 IGHG1P01857 330 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 HPNP05981 417 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 WNT2P09544 360 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 OR13C7P0DN81 318 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 SLC25A6P12236 298 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 PI3P19957 117 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 OTX2P32243 289 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 OR3A4PP47883 348 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 HIST1H3AP68431 136 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 EWSR1Q01844 656 aaKnown RBP eCLIP6.58□□□□□ -1.36
CCDC60-204ENST00000539847 PLCXD2Q0VAA5 305 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 IL24Q13007 206 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 ICAM4Q14773 271 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 SSX2Q16385 188 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 NNATQ16517 81 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 TAF9Q16594 264 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 HIST3H3Q16695 136 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 NKAIN1Q4KMZ8 207 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 PLXDC2Q6UX71 529 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 FBXW12Q6X9E4 464 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 PPP1R32Q7Z5V6 425 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 LINC00346Q8IVM7 164 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 MCEMP1Q8IX19 187 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 H1FOOQ8IZA3 346 aaPredicted RBP6.58□□□□□ -1.36
CCDC60-204ENST00000539847 C1orf87Q8N0U7 546 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 PLPP5Q8NEB5 264 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 OR8B12Q8NGG6 310 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 OR1N1Q8NGS0 311 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 OR2G3Q8NGZ4 309 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 FAM213BQ8TBF2 198 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 Q8WTZ3 238 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 RTN4IP1Q8WWV3 396 aaPredicted RBP6.58□□□□□ -1.36
CCDC60-204ENST00000539847 MBD3L1Q8WWY6 194 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 IL22RA2Q969J5 263 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 SPSB1Q96BD6 273 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 FBXO17Q96EF6 278 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 MMABQ96EY8 250 aaPredicted RBP6.58□□□□□ -1.36
CCDC60-204ENST00000539847 BOD1Q96IK1 185 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 BTF3L4Q96K17 158 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 FAM210BQ96KR6 192 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 TMEM56Q96MV1 263 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 NKX3-1Q99801 234 aaPredicted RBP6.58□□□□□ -1.36
CCDC60-204ENST00000539847 SSX3Q99909 188 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 RTN4RQ9BZR6 473 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 WWTR1Q9GZV5 400 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 BANF2Q9H503 90 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 CDH20Q9HBT6 801 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 CISD1Q9NZ45 108 aaKnown RBP6.58□□□□□ -1.36
CCDC60-204ENST00000539847 MYOTQ9UBF9 498 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 PRSS50Q9UI38 385 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 FBXO7Q9Y3I1 522 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 LHFPL6Q9Y693 200 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 WSB1Q9Y6I7 421 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 TMEM56-RWDD3S4R434 201 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 CELSR1Q9NYQ6 3014 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 ZFHX3Q15911 3703 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 NAV3Q8IVL0 2385 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 A8MWP6 167 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 TRDCB7Z8K6 153 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 GEMIN2O14893 280 aaKnown RBP6.57□□□□□ -1.36
CCDC60-204ENST00000539847 ZG16O60844 167 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 DFFBO76075 338 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 CYB5R3P00387 301 aaPredicted RBP6.57□□□□□ -1.36
CCDC60-204ENST00000539847 UMODP07911 640 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 HLA-DOBP13765 273 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 SELLP14151 372 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 ATP6V0CP27449 155 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 CCKARP32238 428 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 OR1D4P47884 311 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 PIGPP57054 158 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 NHLH2Q02577 135 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 RELQ04864 619 aaPredicted RBP6.57□□□□□ -1.36
CCDC60-204ENST00000539847 PRDX4Q13162 271 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 EXT1Q16394 746 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 HYAL4Q2M3T9 481 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 ABCA11PQ4W5N1 156 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 AKR1C8PQ5T2L2 129 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 FAM69BQ5VUD6 431 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 ZNF324BQ6AW86 544 aaPredicted RBP6.57□□□□□ -1.36
CCDC60-204ENST00000539847 TMEM211Q6ICI0 200 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 OR2T2Q6IF00 324 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 CRIP3Q6Q6R5 217 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 FAM180AQ6UWF9 173 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 FOXL2NBQ6ZUU3 175 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 SLC25A26Q70HW3 274 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 TMEM183AQ8IXX5 376 aa6.57□□□□□ -1.36
CCDC60-204ENST00000539847 ZNF808Q8N4W9 903 aaPredicted RBP6.57□□□□□ -1.36
CCDC60-204ENST00000539847 OR10AD1Q8NGE0 317 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms