RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 LGALS14Q8TCE9 139 aa12.73□□□□□ -0.37
RPAIN-206ENST00000539417 SSMEM1Q8WWF3 244 aa12.73□□□□□ -0.37
RPAIN-206ENST00000539417 MRPS26Q9BYN8 205 aaKnown RBP12.73□□□□□ -0.37
RPAIN-206ENST00000539417 MBNL3Q9NUK0 354 aaKnown RBP12.73□□□□□ -0.37
RPAIN-206ENST00000539417 ELF5Q9UKW6 265 aaPredicted RBP12.73□□□□□ -0.37
RPAIN-206ENST00000539417 PSG11Q9UQ72 335 aa12.73□□□□□ -0.37
RPAIN-206ENST00000539417 H3BUX3 64 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 RAB27BO00194 218 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 ORC5O43913 435 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 NAPSAO96009 420 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 HBZP02008 142 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 DIAPH2-AS1Q14236 149 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 IDNKQ5T6J7 187 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 OR52W1Q6IF63 320 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 Q6ZTK2 550 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 ZFAND2BQ8WV99 257 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 SSX3Q99909 188 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 ZMAT3Q9HA38 289 aaKnown RBP12.72□□□□□ -0.37
RPAIN-206ENST00000539417 TAF9BQ9HBM6 251 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 TBL2Q9Y4P3 447 aaKnown RBP12.72□□□□□ -0.37
RPAIN-206ENST00000539417 FAM181BA6NEQ2 426 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 F2RL2O00254 374 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 SLC31A2O15432 143 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 GNB3P16520 340 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 RAB6AP20340 208 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 VBP1P61758 197 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 RELBQ01201 579 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 GNMTQ14749 295 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 LY6EQ16553 131 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 HLA-DRB5Q30154 266 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 TIMM50Q3ZCQ8 353 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 ZNF880Q6PDB4 577 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 C16orf87Q6PH81 154 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 TMEM86BQ8N661 226 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 OR56B1Q8NGI3 324 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 NDNFQ8TB73 568 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 GFOD1Q9NXC2 390 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 HSF4Q9ULV5 492 aa12.72□□□□□ -0.37
RPAIN-206ENST00000539417 LY6LH3BQJ8 138 aa12.71□□□□□ -0.38
RPAIN-206ENST00000539417 BUB1B-PAK6H3BSN5 160 aa12.71□□□□□ -0.38
RPAIN-206ENST00000539417 J3QR06 171 aa12.71□□□□□ -0.38
RPAIN-206ENST00000539417 SDCBPO00560 298 aaPredicted RBP12.71□□□□□ -0.38
RPAIN-206ENST00000539417 GPR137BO60478 399 aa12.71□□□□□ -0.38
RPAIN-206ENST00000539417 CA11O75493 328 aa12.71□□□□□ -0.38
RPAIN-206ENST00000539417 HTR1DP28221 377 aa12.71□□□□□ -0.38
RPAIN-206ENST00000539417 FAM189A2Q15884 450 aa12.71□□□□□ -0.38
RPAIN-206ENST00000539417 OR52L2PQ8NGH6 319 aa12.71□□□□□ -0.38
RPAIN-206ENST00000539417 OR10V1Q8NGI7 309 aa12.71□□□□□ -0.38
RPAIN-206ENST00000539417 OR10R2Q8NGX6 335 aa12.71□□□□□ -0.38
RPAIN-206ENST00000539417 OR9G1Q8NH87 305 aa12.71□□□□□ -0.38
RPAIN-206ENST00000539417 SLC25A38Q96DW6 304 aa12.71□□□□□ -0.38
RPAIN-206ENST00000539417 MALSU1Q96EH3 234 aa12.71□□□□□ -0.38
RPAIN-206ENST00000539417 ATG5Q9H1Y0 275 aa12.71□□□□□ -0.38
RPAIN-206ENST00000539417 POMT1Q9Y6A1 747 aa12.71□□□□□ -0.38
RPAIN-206ENST00000539417 A0A075B6Q4 140 aa12.7□□□□□ -0.38
RPAIN-206ENST00000539417 MFNGO00587 321 aa12.7□□□□□ -0.38
RPAIN-206ENST00000539417 ZNF134P52741 427 aa12.7□□□□□ -0.38
RPAIN-206ENST00000539417 ACTG1P63261 375 aa12.7□□□□□ -0.38
RPAIN-206ENST00000539417 HMGN3Q15651 99 aa12.7□□□□□ -0.38
RPAIN-206ENST00000539417 CTF1Q16619 201 aa12.7□□□□□ -0.38
RPAIN-206ENST00000539417 LRRC75BQ2VPJ9 315 aa12.7□□□□□ -0.38
RPAIN-206ENST00000539417 C6orf183Q5T699 404 aa12.7□□□□□ -0.38
RPAIN-206ENST00000539417 MINOS1Q5TGZ0 78 aa12.7□□□□□ -0.38
RPAIN-206ENST00000539417 GPR107Q5VW38 600 aa12.7□□□□□ -0.38
RPAIN-206ENST00000539417 CCBE1Q6UXH8 406 aaPredicted RBP12.7□□□□□ -0.38
RPAIN-206ENST00000539417 OR10A7Q8NGE5 316 aa12.7□□□□□ -0.38
RPAIN-206ENST00000539417 SETD6Q8TBK2 473 aa12.7□□□□□ -0.38
RPAIN-206ENST00000539417 PTX4Q96A99 478 aa12.7□□□□□ -0.38
RPAIN-206ENST00000539417 RAB3CQ96E17 227 aa12.7□□□□□ -0.38
RPAIN-206ENST00000539417 RBMXL1Q96E39 390 aaKnown RBP12.7□□□□□ -0.38
RPAIN-206ENST00000539417 MMP28Q9H239 520 aa12.7□□□□□ -0.38
RPAIN-206ENST00000539417 CHMP1AQ9HD42 196 aaPredicted RBP12.7□□□□□ -0.38
RPAIN-206ENST00000539417 MINOS1-NBL1R4GNA1 71 aa12.7□□□□□ -0.38
RPAIN-206ENST00000539417 STAB1Q9NY15 2570 aa12.69□□□□□ -0.38
RPAIN-206ENST00000539417 TMEM89A2RUT3 159 aa12.69□□□□□ -0.38
RPAIN-206ENST00000539417 DPPA5A6NC42 116 aa12.69□□□□□ -0.38
RPAIN-206ENST00000539417 H3BUI4 141 aa12.69□□□□□ -0.38
RPAIN-206ENST00000539417 TOR1AO14656 332 aa12.69□□□□□ -0.38
RPAIN-206ENST00000539417 CD24P25063 80 aa12.69□□□□□ -0.38
RPAIN-206ENST00000539417 SERPINB10P48595 397 aa12.69□□□□□ -0.38
RPAIN-206ENST00000539417 TPTE2P1Q5T6R2 138 aa12.69□□□□□ -0.38
RPAIN-206ENST00000539417 ANKRD13BQ86YJ7 626 aa12.69□□□□□ -0.38
RPAIN-206ENST00000539417 ZNF439Q8NDP4 499 aa12.69□□□□□ -0.38
RPAIN-206ENST00000539417 ZNF596Q8TC21 504 aa12.69□□□□□ -0.38
RPAIN-206ENST00000539417 DPAGT1Q9H3H5 408 aa12.69□□□□□ -0.38
RPAIN-206ENST00000539417 C1RLQ9NZP8 487 aa12.69□□□□□ -0.38
RPAIN-206ENST00000539417 DPM3Q9P2X0 92 aa12.69□□□□□ -0.38
RPAIN-206ENST00000539417 VPREB3Q9UKI3 123 aa12.69□□□□□ -0.38
RPAIN-206ENST00000539417 TRBV6-6A0A0A6YYG2 114 aa12.68□□□□□ -0.38
RPAIN-206ENST00000539417 VGLL3A8MV65 326 aa12.68□□□□□ -0.38
RPAIN-206ENST00000539417 SPINT2O43291 252 aa12.68□□□□□ -0.38
RPAIN-206ENST00000539417 CHST1O43916 411 aa12.68□□□□□ -0.38
RPAIN-206ENST00000539417 HKR1P10072 659 aa12.68□□□□□ -0.38
RPAIN-206ENST00000539417 HIST1H1DP16402 221 aaKnown RBP12.68□□□□□ -0.38
RPAIN-206ENST00000539417 OR52M1Q8NGK5 317 aa12.68□□□□□ -0.38
RPAIN-206ENST00000539417 MAFIPQ8WZ33 124 aa12.68□□□□□ -0.38
RPAIN-206ENST00000539417 CMSS1Q9BQ75 279 aaKnown RBP12.68□□□□□ -0.38
RPAIN-206ENST00000539417 Q9N2K0 584 aa12.68□□□□□ -0.38
RPAIN-206ENST00000539417 GABARAPO95166 117 aa12.67□□□□□ -0.38
RPAIN-206ENST00000539417 SCTP09683 121 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms