RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 PLPPR5Q32ZL2 321 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 Q5XG85 94 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 TNFAIP8L2Q6P589 184 aaPredicted RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 UGT2A3Q6UWM9 527 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 C3orf62Q6ZUJ4 267 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 TMEM179BQ7Z7N9 219 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 UNC93AQ86WB7 457 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 HS3ST5Q8IZT8 346 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 EID2Q8N6I1 236 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 OR13G1Q8NGZ3 307 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 OR52P1PQ8NH57 321 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 C15orf40Q8WUR7 153 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 MARC2Q969Z3 335 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 EEF1AKMT3Q96AZ1 226 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 PPP1R36Q96LQ0 422 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 DHRS9Q9BPW9 319 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 XAGE1AQ9HD64 81 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF331Q9NQX6 463 aaPredicted RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 PLEKHJ1Q9NW61 149 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 IFNKQ9P0W0 207 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 DEC1Q9P2X7 70 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 RSL24D1Q9UHA3 163 aaKnown RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 VAX2Q9UIW0 290 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 SNX24Q9Y343 169 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 PIK3C2GO75747 1445 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 COL18A1P39060 1754 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 SSPOA2VEC9 5147 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 PTPRFP10586 1907 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 PTPRDP23468 1912 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 COL1A2P08123 1366 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 CDK5RAP2Q96SN8 1893 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 TRPM2O94759 1503 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 KIF20BQ96Q89 1820 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 SZT2Q5T011 3432 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 GREB1Q4ZG55 1949 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 TRAV8-7A0A075B6U6 113 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 A0A096LNJ9 63 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 A0A0A6YYH2 397 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 TMEM223A0PJW6 202 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 TMEM72A0PK05 275 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 TVP23AA6NH52 213 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 A6NJ64 397 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF729A6NN14 1252 aaPredicted RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 TMX2-CTNND1H3BSU7 103 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 KPNA4O00629 521 aaPredicted RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 PSCAO43653 123 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 PGLYRP1O75594 196 aaPredicted RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 LYPLA2O95372 231 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 RAB36O95755 333 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 INSP01308 110 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 IGHMP01871 453 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 MT-ND4P03905 459 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 MAS1P04201 325 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 DNAH10OSP0CZ25 163 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 ESDP10768 282 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 APLNRP35414 380 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 POLR2IP36954 125 aaKnown RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 STC1P52823 247 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 MLF1P58340 268 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 ACSBG2Q5FVE4 666 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 FBXL22Q6P050 247 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 FAM183BPQ6ZVS7 135 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 SLC36A1Q7Z2H8 476 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 LRRC25Q8N386 305 aaPredicted RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 RIBC1Q8N443 379 aaPredicted RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 C10orf126Q8N4M7 172 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 SLC25A29Q8N8R3 303 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 OR8K1Q8NGG5 319 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 COQ8AQ8NI60 647 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 NT5CQ8TCD5 201 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 CASTOR1Q8WTX7 329 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 CCDC12Q8WUD4 166 aaPredicted RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 GLT1D1Q96MS3 346 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 CDC42EP4Q9H3Q1 356 aaKnown RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 CENPHQ9H3R5 247 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 PTGES2Q9H7Z7 377 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 ZC4H2Q9NQZ6 224 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 DDIT4Q9NX09 232 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 PSMD13Q9UNM6 376 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 ERGIC3Q9Y282 383 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 KLF12Q9Y4X4 402 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 HEBP2Q9Y5Z4 205 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 PLCH2O75038 1416 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 COL4A2P08572 1712 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 ITSN1Q15811 1721 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 RYR2Q92736 4967 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 SCN11AQ9UI33 1791 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 ABCB11O95342 1321 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 FBN1P35555 2871 aaKnown RBP0.63□□□□□ -2.31
HIF1A-204ENST00000539097 FMN2Q9NZ56 1722 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 SMIM26A0A096LP01 95 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 SMIM23A6NLE4 172 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 C9J4A7 227 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 KRBOX1C9JBD0 128 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF878C9JN71 531 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 LRRN3E7EW58 273 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 F5H5K5 113 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 F5H5T6 163 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 K7EPK0 472 aa0.63□□□□□ -2.31
HIF1A-204ENST00000539097 FABP7O15540 132 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms