RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 SPSB4Q96A44 273 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 DCTN5Q9BTE1 182 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 TMEM222Q9H0R3 208 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 CACNG5Q9UF02 275 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 IGSF23A1L1A6 192 aa7.4□□□□□ -1.22
UBE3B-208ENST00000538070 ZNF724A8MTY0 619 aa7.4□□□□□ -1.22
UBE3B-208ENST00000538070 GPR137BO60478 399 aa7.4□□□□□ -1.22
UBE3B-208ENST00000538070 METTL15P1P0C7V9 234 aa7.4□□□□□ -1.22
UBE3B-208ENST00000538070 PSG7Q13046 419 aa7.4□□□□□ -1.22
UBE3B-208ENST00000538070 DAZAP2Q15038 168 aaPredicted RBP7.4□□□□□ -1.22
UBE3B-208ENST00000538070 SPANXN5Q5MJ07 72 aa7.4□□□□□ -1.22
UBE3B-208ENST00000538070 SELENOHQ8IZQ5 122 aaKnown RBP7.4□□□□□ -1.22
UBE3B-208ENST00000538070 SFT2D1Q8WV19 159 aa7.4□□□□□ -1.22
UBE3B-208ENST00000538070 NRIP2Q9BQI9 281 aa7.4□□□□□ -1.22
UBE3B-208ENST00000538070 PLEKHA2Q9HB19 425 aa7.4□□□□□ -1.22
UBE3B-208ENST00000538070 GLS2Q9UI32 602 aa7.4□□□□□ -1.22
UBE3B-208ENST00000538070 ZDHHC8Q9ULC8 765 aa7.4□□□□□ -1.22
UBE3B-208ENST00000538070 MRPS18CQ9Y3D5 142 aaKnown RBP7.4□□□□□ -1.22
UBE3B-208ENST00000538070 TAAR5O14804 337 aa7.4□□□□□ -1.22
UBE3B-208ENST00000538070 PGLYRP1O75594 196 aaPredicted RBP7.4□□□□□ -1.22
UBE3B-208ENST00000538070 FBP1P09467 338 aa7.4□□□□□ -1.22
UBE3B-208ENST00000538070 SSX9Q7RTT3 188 aa7.4□□□□□ -1.22
UBE3B-208ENST00000538070 THNSL2Q86YJ6 484 aa7.4□□□□□ -1.22
UBE3B-208ENST00000538070 C9orf106Q8NAJ2 232 aa7.4□□□□□ -1.22
UBE3B-208ENST00000538070 OR10Z1Q8NGY1 313 aa7.4□□□□□ -1.22
UBE3B-208ENST00000538070 MRPL30Q8TCC3 161 aaKnown RBP7.4□□□□□ -1.22
UBE3B-208ENST00000538070 USB1Q9BQ65 265 aaKnown RBP7.4□□□□□ -1.22
UBE3B-208ENST00000538070 TMED3Q9Y3Q3 217 aa7.4□□□□□ -1.22
UBE3B-208ENST00000538070 ATP23Q9Y6H3 246 aa7.4□□□□□ -1.22
UBE3B-208ENST00000538070 IGHV3OR15-7A0A075B7D8 119 aa7.4□□□□□ -1.23
UBE3B-208ENST00000538070 A0A0G2JRQ6 117 aa7.4□□□□□ -1.23
UBE3B-208ENST00000538070 H7C1Q1 480 aa7.4□□□□□ -1.23
UBE3B-208ENST00000538070 FGF16O43320 207 aa7.4□□□□□ -1.23
UBE3B-208ENST00000538070 CA11O75493 328 aa7.4□□□□□ -1.23
UBE3B-208ENST00000538070 CBR1P16152 277 aa7.4□□□□□ -1.23
UBE3B-208ENST00000538070 PMELP40967 661 aa7.4□□□□□ -1.23
UBE3B-208ENST00000538070 UCP2P55851 309 aa7.4□□□□□ -1.23
UBE3B-208ENST00000538070 ASCL4Q6XD76 172 aa7.4□□□□□ -1.23
UBE3B-208ENST00000538070 WDR86Q86TI4 376 aa7.4□□□□□ -1.23
UBE3B-208ENST00000538070 ZNF610Q8N9Z0 462 aa7.4□□□□□ -1.23
UBE3B-208ENST00000538070 OR52L2PQ8NGH6 319 aa7.4□□□□□ -1.23
UBE3B-208ENST00000538070 OR1L1Q8NH94 360 aa7.4□□□□□ -1.23
UBE3B-208ENST00000538070 C14orf79Q96F83 325 aa7.4□□□□□ -1.23
UBE3B-208ENST00000538070 IP6K3Q96PC2 410 aa7.4□□□□□ -1.23
UBE3B-208ENST00000538070 RARRES2Q99969 163 aa7.4□□□□□ -1.23
UBE3B-208ENST00000538070 ABCA1O95477 2261 aa7.4□□□□□ -1.23
UBE3B-208ENST00000538070 SPTBN4Q9H254 2564 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 RAB19A4D1S5 217 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 SNAPINO95295 136 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 GCH1P30793 250 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 F2RL1P55085 397 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 ELLP55199 621 aaPredicted RBP7.39□□□□□ -1.23
UBE3B-208ENST00000538070 NAAAQ02083 359 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 IL15RAQ13261 267 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 OR2Z1Q8NG97 314 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 KLF14Q8TD94 323 aaPredicted RBP7.39□□□□□ -1.23
UBE3B-208ENST00000538070 C18orf12Q96KH6 178 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 TECTBQ96PL2 329 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 RSRP1Q9BUV0 290 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 C19orf12Q9NSK7 152 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 MPC1Q9Y5U8 109 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 SMG1Q96Q15 3661 aaKnown RBP7.39□□□□□ -1.23
UBE3B-208ENST00000538070 ARFGEF3Q5TH69 2177 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 J3QT63 122 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 SMPD2O60906 423 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 ARG1P05089 322 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 ATP6V0CP27449 155 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 PEA15Q15121 130 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 GUK1Q16774 197 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 FAM214BQ7L5A3 538 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 RPRMLQ8N4K4 120 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 CLRN3Q8NCR9 226 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 DMBX1Q8NFW5 382 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 NINJ1Q92982 152 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 GALNT14Q96FL9 552 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 SPIN2AQ99865 258 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 SPIN2BQ9BPZ2 258 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 TMEM100Q9NV29 134 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 IL36GQ9NZH8 169 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 KCNIP1Q9NZI2 227 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 RCC2Q9P258 522 aaKnown RBP7.39□□□□□ -1.23
UBE3B-208ENST00000538070 TUBD1Q9UJT1 453 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 OR2W1Q9Y3N9 320 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 SPENQ96T58 3664 aaKnown RBP7.39□□□□□ -1.23
UBE3B-208ENST00000538070 ZNF318Q5VUA4 2279 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 TNRC6AQ8NDV7 1962 aaKnown RBP7.39□□□□□ -1.23
UBE3B-208ENST00000538070 M0R1B8 84 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 SH2D1BO14796 132 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 SULT1A2P50226 295 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 FGF8P55075 233 aaPredicted RBP7.39□□□□□ -1.23
UBE3B-208ENST00000538070 EDDM3BP56851 147 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 FAM201AQ5SY85 155 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 LCN15Q6UWW0 184 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 GTF3AQ92664 365 aaKnown RBP7.39□□□□□ -1.23
UBE3B-208ENST00000538070 URGCP-MRPS24S4R325 110 aa7.39□□□□□ -1.23
UBE3B-208ENST00000538070 OR5B21A6NL26 309 aa7.38□□□□□ -1.23
UBE3B-208ENST00000538070 CCL20P78556 96 aa7.38□□□□□ -1.23
UBE3B-208ENST00000538070 HLA-DRB3P79483 266 aa7.38□□□□□ -1.23
UBE3B-208ENST00000538070 MPV17LQ2QL34 196 aa7.38□□□□□ -1.23
UBE3B-208ENST00000538070 AKR1C8PQ5T2L2 129 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms