RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 OR10A7Q8NGE5 316 aa11.91□□□□□ -0.5
LRRK1-211ENST00000538064 MRGPRDQ8TDS7 321 aa11.91□□□□□ -0.5
LRRK1-211ENST00000538064 TOMM40LQ969M1 308 aa11.91□□□□□ -0.5
LRRK1-211ENST00000538064 RPEQ96AT9 228 aa11.91□□□□□ -0.5
LRRK1-211ENST00000538064 OR4F4Q96R69 305 aa11.91□□□□□ -0.5
LRRK1-211ENST00000538064 CST11Q9H112 138 aa11.91□□□□□ -0.5
LRRK1-211ENST00000538064 ZNF581Q9P0T4 197 aa11.91□□□□□ -0.5
LRRK1-211ENST00000538064 STUB1Q9UNE7 303 aa11.91□□□□□ -0.5
LRRK1-211ENST00000538064 SSR3Q9UNL2 185 aa11.91□□□□□ -0.5
LRRK1-211ENST00000538064 NOTCH3Q9UM47 2321 aa11.91□□□□□ -0.5
LRRK1-211ENST00000538064 J3QR06 171 aa11.9□□□□□ -0.5
LRRK1-211ENST00000538064 M0QZK8 103 aa11.9□□□□□ -0.5
LRRK1-211ENST00000538064 OR7C1O76099 320 aaPredicted RBP11.9□□□□□ -0.5
LRRK1-211ENST00000538064 HTR2CP28335 458 aa11.9□□□□□ -0.5
LRRK1-211ENST00000538064 C1orf100Q5SVJ3 147 aa11.9□□□□□ -0.5
LRRK1-211ENST00000538064 OR6M1Q8NGM8 313 aa11.9□□□□□ -0.5
LRRK1-211ENST00000538064 PLGRKTQ9HBL7 147 aa11.9□□□□□ -0.5
LRRK1-211ENST00000538064 SPACA1Q9HBV2 294 aa11.9□□□□□ -0.5
LRRK1-211ENST00000538064 AK6Q9Y3D8 172 aaKnown RBP11.9□□□□□ -0.5
LRRK1-211ENST00000538064 TRAV1-2A0A0B4J238 106 aa11.89□□□□□ -0.51
LRRK1-211ENST00000538064 A0A1W2PPI3 338 aa11.89□□□□□ -0.51
LRRK1-211ENST00000538064 TMEM30CPA0ZSE6 113 aa11.89□□□□□ -0.51
LRRK1-211ENST00000538064 GEMIN2O14893 280 aaKnown RBP11.89□□□□□ -0.51
LRRK1-211ENST00000538064 CRTAPO75718 401 aaPredicted RBP11.89□□□□□ -0.51
LRRK1-211ENST00000538064 AMY1AP04745 511 aa11.89□□□□□ -0.51
LRRK1-211ENST00000538064 AMY2AP04746 511 aa11.89□□□□□ -0.51
LRRK1-211ENST00000538064 CD37P11049 281 aa11.89□□□□□ -0.51
LRRK1-211ENST00000538064 MADCAM1Q13477 382 aa11.89□□□□□ -0.51
LRRK1-211ENST00000538064 ABCA11PQ4W5N1 156 aa11.89□□□□□ -0.51
LRRK1-211ENST00000538064 C22orf42Q6IC83 251 aa11.89□□□□□ -0.51
LRRK1-211ENST00000538064 SLC16A12Q6ZSM3 486 aa11.89□□□□□ -0.51
LRRK1-211ENST00000538064 LEAP2Q969E1 77 aa11.89□□□□□ -0.51
LRRK1-211ENST00000538064 R3HDM4Q96D70 268 aa11.89□□□□□ -0.51
LRRK1-211ENST00000538064 PSG11Q9UQ72 335 aa11.89□□□□□ -0.51
LRRK1-211ENST00000538064 MOB4Q9Y3A3 225 aa11.89□□□□□ -0.51
LRRK1-211ENST00000538064 V9GY05 133 aa11.89□□□□□ -0.51
LRRK1-211ENST00000538064 A0A1W2PP11 408 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 FAM90A10PA6NDY2 464 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 FAM90A18PA6NE21 464 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 FAM90A16PA6NEW6 464 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 FAM90A20PA6NIJ5 464 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 FAM90A7PA6NKC0 464 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 FAM90A9PA6NNJ1 464 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 FAM90A12PA8MX19 464 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 FAM90A5PA8MXJ8 464 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 FAM90A23PA8MXZ1 464 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 SLC17A2O00624 439 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 SLC22A1O15245 554 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 BPNT1O95861 308 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 LPLP06858 475 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 FAM90A15PP0C7V4 464 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 FAM90A13PP0C7W8 464 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 FAM90A14PP0C7W9 464 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 FAM90A24PP0C7X0 464 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 FAM106CPP0CH98 169 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 MGMTP16455 207 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 CD36P16671 472 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 FGF9P31371 208 aaPredicted RBP11.88□□□□□ -0.51
LRRK1-211ENST00000538064 RAB7AP51149 207 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 CD83Q01151 205 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 LTC4SQ16873 150 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 ATAD3CQ5T2N8 411 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 THNSL2Q86YJ6 484 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 OR5AU1Q8NGC0 362 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 OR56B4Q8NH76 319 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 RFESDQ8TAC1 157 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 KCNG3Q8TAE7 436 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 SELENOIQ9C0D9 397 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 BANF2Q9H503 90 aa11.88□□□□□ -0.51
LRRK1-211ENST00000538064 RCC2Q9P258 522 aaKnown RBP11.88□□□□□ -0.51
LRRK1-211ENST00000538064 TRAV39A0A0B4J263 110 aa11.87□□□□□ -0.51
LRRK1-211ENST00000538064 IGHV3-7P01780 117 aa11.87□□□□□ -0.51
LRRK1-211ENST00000538064 SNRNP70P08621 437 aaKnown RBP11.87□□□□□ -0.51
LRRK1-211ENST00000538064 ARSBP15848 533 aa11.87□□□□□ -0.51
LRRK1-211ENST00000538064 GNG10P50151 68 aa11.87□□□□□ -0.51
LRRK1-211ENST00000538064 RAB11BQ15907 218 aa11.87□□□□□ -0.51
LRRK1-211ENST00000538064 TIMM50Q3ZCQ8 353 aa11.87□□□□□ -0.51
LRRK1-211ENST00000538064 OR8H3Q8N146 312 aa11.87□□□□□ -0.51
LRRK1-211ENST00000538064 OR10X1Q8NGY0 326 aa11.87□□□□□ -0.51
LRRK1-211ENST00000538064 NEK7Q8TDX7 302 aa11.87□□□□□ -0.51
LRRK1-211ENST00000538064 FAM46BQ96A09 425 aa11.87□□□□□ -0.51
LRRK1-211ENST00000538064 TXNL4BQ9NX01 149 aaKnown RBP11.87□□□□□ -0.51
LRRK1-211ENST00000538064 SH2D7A6NKC9 451 aaPredicted RBP11.86□□□□□ -0.51
LRRK1-211ENST00000538064 MCRIP1C9JLW8 97 aa11.86□□□□□ -0.51
LRRK1-211ENST00000538064 C15orf65H3BRN8 121 aa11.86□□□□□ -0.51
LRRK1-211ENST00000538064 MPIG6BO95866 241 aa11.86□□□□□ -0.51
LRRK1-211ENST00000538064 VSIG8P0DPA2 414 aa11.86□□□□□ -0.51
LRRK1-211ENST00000538064 RAB3BP20337 219 aa11.86□□□□□ -0.51
LRRK1-211ENST00000538064 GZMHP20718 246 aa11.86□□□□□ -0.51
LRRK1-211ENST00000538064 DIAPH2-AS1Q14236 149 aa11.86□□□□□ -0.51
LRRK1-211ENST00000538064 TCTEX1D4Q5JR98 221 aa11.86□□□□□ -0.51
LRRK1-211ENST00000538064 ZNF497Q6ZNH5 498 aa11.86□□□□□ -0.51
LRRK1-211ENST00000538064 CENPVQ7Z7K6 275 aaPredicted RBP11.86□□□□□ -0.51
LRRK1-211ENST00000538064 DRAM1Q8N682 238 aa11.86□□□□□ -0.51
LRRK1-211ENST00000538064 C8orf31Q8N9H6 132 aa11.86□□□□□ -0.51
LRRK1-211ENST00000538064 TMEM104Q8NE00 496 aa11.86□□□□□ -0.51
LRRK1-211ENST00000538064 OR52M1Q8NGK5 317 aa11.86□□□□□ -0.51
LRRK1-211ENST00000538064 KCTD7Q96MP8 289 aa11.86□□□□□ -0.51
LRRK1-211ENST00000538064 CHCHD6Q9BRQ6 235 aa11.86□□□□□ -0.51
LRRK1-211ENST00000538064 URM1Q9BTM9 101 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms