RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 CR1LQ2VPA4 569 aa12.9□□□□□ -0.35
SFSWAP-206ENST00000537582 RNASE10Q5GAN6 216 aaKnown RBP12.9□□□□□ -0.35
SFSWAP-206ENST00000537582 Q96MF0 132 aa12.9□□□□□ -0.35
SFSWAP-206ENST00000537582 PARP12Q9H0J9 701 aaKnown RBP12.9□□□□□ -0.35
SFSWAP-206ENST00000537582 CALYQ9NYX4 217 aa12.9□□□□□ -0.35
SFSWAP-206ENST00000537582 EHFQ9NZC4 300 aa12.9□□□□□ -0.35
SFSWAP-206ENST00000537582 OR6C3Q9NZP0 311 aa12.9□□□□□ -0.35
SFSWAP-206ENST00000537582 LINC00312Q9Y6C7 94 aa12.9□□□□□ -0.35
SFSWAP-206ENST00000537582 KIAA2026Q5HYC2 2103 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 KIR2DS1A0A191URI9 304 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 RNF223E7ERA6 249 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 AMY2AP04746 511 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 KIR2DS4P43632 304 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 OR3A3P47888 321 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 EIF2B2P49770 351 aaKnown RBP12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 TAS2R46P59540 309 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 AP3S2P59780 193 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 PRB3Q04118 309 aaPredicted RBP12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 MEF2CQ06413 473 aaPredicted RBP12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 CD300CQ08708 224 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 DYRK1AQ13627 763 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 KIR2DS1Q14954 304 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 CDK10Q15131 360 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 C6orf183Q5T699 404 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 PRAMEF5Q5TYX0 476 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 OVCH2Q7RTZ1 564 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 AKAP14Q86UN6 197 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 ZNF565Q8N9K5 539 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 WFDC11Q8NEX6 87 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 OR52L2PQ8NGH6 319 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 OR51S1Q8NGJ8 323 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 CORO2AQ92828 525 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 NCOR1P1Q9H4R4 102 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 KCNIP1Q9NZI2 227 aa12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 ZNF107Q9UII5 783 aaPredicted RBP12.89□□□□□ -0.35
SFSWAP-206ENST00000537582 ABCA2Q9BZC7 2435 aa12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 LOC105371242A0A075B767 164 aa12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 FAM172BPA6NC97 362 aa12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 IGHV3-7P01780 117 aa12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 OR5H8P0DN80 308 aa12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 SLC25A16P16260 332 aa12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 USF1P22415 310 aaPredicted RBP12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 NFYAP23511 347 aaPredicted RBP12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 NPY4RP50391 375 aa12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 DLX6P56179 175 aa12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 LY6G5BQ8NDX9 201 aa12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 OR4A4PQ8NGN8 299 aa12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 LEAP2Q969E1 77 aa12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 MRGPRFQ96AM1 343 aa12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 CABLES2Q9BTV7 478 aa12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 MMP26Q9NRE1 261 aa12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 NECAP2Q9NVZ3 263 aa12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 SLC23A1Q9UHI7 598 aa12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 ARHGAP32A7KAX9 2087 aa12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 DSCAML1Q8TD84 2053 aa12.88□□□□□ -0.35
SFSWAP-206ENST00000537582 TRBV23-1A0A0A0MS06 115 aa12.87□□□□□ -0.35
SFSWAP-206ENST00000537582 PPIAL4CA0A0B4J2A2 164 aa12.87□□□□□ -0.35
SFSWAP-206ENST00000537582 KBTBD11-OT1A0A1B0GTJ5 212 aa12.87□□□□□ -0.35
SFSWAP-206ENST00000537582 PPIAL4GP0DN37 164 aa12.87□□□□□ -0.35
SFSWAP-206ENST00000537582 GZMHP20718 246 aa12.87□□□□□ -0.35
SFSWAP-206ENST00000537582 SCGB2B2Q4G0G5 96 aa12.87□□□□□ -0.35
SFSWAP-206ENST00000537582 VAX1Q5SQQ9 334 aa12.87□□□□□ -0.35
SFSWAP-206ENST00000537582 NRARPQ7Z6K4 114 aa12.87□□□□□ -0.35
SFSWAP-206ENST00000537582 OR10V1Q8NGI7 309 aa12.87□□□□□ -0.35
SFSWAP-206ENST00000537582 RAB39BQ96DA2 213 aa12.87□□□□□ -0.35
SFSWAP-206ENST00000537582 ZNF714Q96N38 554 aa12.87□□□□□ -0.35
SFSWAP-206ENST00000537582 UBE2J1Q9Y385 318 aaPredicted RBP12.87□□□□□ -0.35
SFSWAP-206ENST00000537582 CCDC168Q8NDH2 2452 aa12.87□□□□□ -0.35
SFSWAP-206ENST00000537582 BAHCC1Q9P281 2608 aa12.87□□□□□ -0.35
SFSWAP-206ENST00000537582 MED13LQ71F56 2210 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 POM121CA8CG34 1229 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 NPIPB11E5RHQ5 1161 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 TRAPPC2P0DI81 140 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 TRAPPC2BP0DI82 140 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 ZNF728P0DKX0 622 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 TBPP20226 339 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 PPP1CCP36873 323 aaKnown RBP12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 PAX2Q02962 417 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 ACTBL2Q562R1 376 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 ZNF660Q6AZW8 331 aaPredicted RBP12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 ZNF782Q6ZMW2 699 aaPredicted RBP12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 C11orf42Q8N5U0 333 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 C8orf46Q8TAG6 207 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 DACT3Q96B18 629 aaPredicted RBP12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 GALMQ96C23 342 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 ONECUT1Q9UBC0 465 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 MGAT4AQ9UM21 535 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 PRRC2AP48634 2157 aaKnown RBP12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 TRBV6-7A0A0A0MS04 114 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 ZNF729A6NN14 1252 aaPredicted RBP12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 A8MXK9 166 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 GPR37O15354 613 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 SPINT2O43291 252 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 AADACP22760 399 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 FCGR2CP31995 323 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 LOXL3P58215 753 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 MEF2DQ14814 521 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 TRAT1Q6PIZ9 186 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 PRSS57Q6UWY2 283 aa12.86□□□□□ -0.35
SFSWAP-206ENST00000537582 LDLRAD3Q86YD5 345 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms