RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SEMA4FO95754 770 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 MPIG6BO95866 241 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 ABHD16AO95870 558 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 C1QTNF9P0C862 333 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 AMY2BP19961 511 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 OR1D2P34982 312 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 ID1P41134 155 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 SSR2P43308 183 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 RAC3P60763 192 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 RPS16P62249 146 aaKnown RBP3.21□□□□□ -1.9
MCF2-210ENST00000536274 PSG4Q00888 419 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 TGFBR3Q03167 851 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 FAM53BQ14153 422 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 MSMO1Q15800 293 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 IZUMO4Q1ZYL8 232 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 BSXQ3C1V8 233 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 ANXA2RQ3ZCQ2 193 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 FAM166AQ6J272 317 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 ADAMTSL4Q6UY14 1074 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 C1orf174Q8IYL3 243 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 ARHGEF39Q8N4T4 335 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 GATSQ8NAP1 163 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 OR13H1Q8NG92 308 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 OR2Y1Q8NGV0 311 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 SLC2A12Q8TD20 617 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 SSC4DQ8WTU2 575 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 CT55Q8WUE5 264 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 CTHRC1Q96CG8 243 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 ZNF48Q96MX3 618 aaPredicted RBP3.21□□□□□ -1.9
MCF2-210ENST00000536274 ATP6V0BQ99437 205 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 AGMATQ9BSE5 352 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 CHRDL1Q9BU40 450 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 DERL1Q9BUN8 251 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 PECRQ9BY49 303 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 KIR3DX1Q9H7L2 352 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 ELOVL5Q9NYP7 299 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 CRIM1Q9NZV1 1036 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 DHDHQ9UQ10 334 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 STRAPQ9Y3F4 350 aaKnown RBP3.21□□□□□ -1.9
MCF2-210ENST00000536274 YIPF1Q9Y548 306 aa3.21□□□□□ -1.9
MCF2-210ENST00000536274 MED12Q93074 2177 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 A0A1B0GWA3 101 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 C17orf51A8MQB3 221 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 SHISA8B8ZZ34 492 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.2□□□□□ -1.9
MCF2-210ENST00000536274 P2RY10O00398 339 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 RBFOX2O43251 390 aaKnown RBP eCLIP3.2□□□□□ -1.9
MCF2-210ENST00000536274 HAND1O96004 215 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 CRYAAP02489 173 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 ZNF883P0CG24 379 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 SLC6A6P31641 620 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 CSNK1A1P48729 337 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 FUT6P51993 359 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 RRADP55042 308 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 RPL15P61313 204 aaKnown RBP3.2□□□□□ -1.9
MCF2-210ENST00000536274 CSNK2A1P68400 391 aaPredicted RBP3.2□□□□□ -1.9
MCF2-210ENST00000536274 MEF2BQ02080 365 aaPredicted RBP3.2□□□□□ -1.9
MCF2-210ENST00000536274 BAXQ07812 192 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 ARFRP1Q13795 201 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 RUNX2Q13950 521 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 TRMT12Q53H54 448 aaKnown RBP3.2□□□□□ -1.9
MCF2-210ENST00000536274 Q56UQ5 140 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 FAM69BQ5VUD6 431 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 FBXW12Q6X9E4 464 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 SPATA12Q7Z6I5 190 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 BOD1L2Q8IYS8 172 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 TCTEX1D1Q8N7M0 179 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 ZNF114Q8NC26 417 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 RCBTB1Q8NDN9 531 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 CSNK2A3Q8NEV1 391 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 OR4F17Q8NGA8 305 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 FAM222BQ8WU58 562 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 RTN4IP1Q8WWV3 396 aaPredicted RBP3.2□□□□□ -1.9
MCF2-210ENST00000536274 ARHGAP5-AS1Q96IT6 56 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 POM121L2Q96KW2 1035 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 C4orf45Q96LM5 186 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 OR4F4Q96R69 305 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 AIF1LQ9BQI0 150 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 HDAC8Q9BY41 377 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 MAGEH1Q9H213 219 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 FAM124BQ9H5Z6 455 aaPredicted RBP3.2□□□□□ -1.9
MCF2-210ENST00000536274 PLEKHF2Q9H8W4 249 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 ZDHHC11Q9H8X9 412 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 NPVFQ9HCQ7 196 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 BCL2L10Q9HD36 194 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 RPRMQ9NS64 109 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 THAP10Q9P2Z0 257 aaPredicted RBP3.2□□□□□ -1.9
MCF2-210ENST00000536274 NXT1Q9UKK6 140 aaKnown RBP3.2□□□□□ -1.9
MCF2-210ENST00000536274 A0A087X0K7 114 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 MEGF11A6BM72 1044 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 KIAA1324LA8MWY0 1029 aaPredicted RBP3.2□□□□□ -1.9
MCF2-210ENST00000536274 TBL1XO60907 577 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 C1orf105O95561 183 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 MT-CO2P00403 227 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 HRASP01112 189 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 CATP04040 527 aaKnown RBP3.2□□□□□ -1.9
MCF2-210ENST00000536274 WNT2P09544 360 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 C3orf79P0CE67 100 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 IGLL1P15814 213 aa3.2□□□□□ -1.9
MCF2-210ENST00000536274 GABRA3P34903 492 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms