RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 S100A6P06703 90 aa13.63□□□□□ -0.23
CHMP1A-202ENST00000535997 RAB5AP20339 215 aa13.63□□□□□ -0.23
CHMP1A-202ENST00000535997 MDH2P40926 338 aaKnown RBP13.63□□□□□ -0.23
CHMP1A-202ENST00000535997 RPL23AP62750 156 aaKnown RBP13.63□□□□□ -0.23
CHMP1A-202ENST00000535997 TLE4Q04727 773 aa13.63□□□□□ -0.23
CHMP1A-202ENST00000535997 EIF2S3LQ2VIR3 472 aaKnown RBP13.63□□□□□ -0.23
CHMP1A-202ENST00000535997 KRBOX4Q5JUW0 171 aa13.63□□□□□ -0.23
CHMP1A-202ENST00000535997 C17orf78Q8N4C9 275 aa13.63□□□□□ -0.23
CHMP1A-202ENST00000535997 GPR146Q96CH1 333 aa13.63□□□□□ -0.23
CHMP1A-202ENST00000535997 KIAA1324LA8MWY0 1029 aaPredicted RBP13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 J3QW42 95 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 RHBDL1O75783 438 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 AKR1C8PQ5T2L2 129 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 Q6P435 159 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 OR10V1Q8NGI7 309 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 LSM10Q969L4 123 aaKnown RBP13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 GP6Q9HCN6 339 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 ESPL1Q14674 2120 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 ARHGAP21Q5T5U3 1957 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 TECTAO75443 2155 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 A0A1W2PPH5 198 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 MAS1LP35410 378 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 TAS2R30P59541 319 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 ZNF154Q13106 437 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 C3AR1Q16581 482 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 MOB1BQ7L9L4 216 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 Q8IYB0 196 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 FAM24BQ8N5W8 94 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 MDS2Q8NDY4 140 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 OR51H1Q8NH63 302 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 RBMXL1Q96E39 390 aaKnown RBP13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 MALSU1Q96EH3 234 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 C12orf49Q9H741 205 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 WSB1Q9Y6I7 421 aa13.62□□□□□ -0.23
CHMP1A-202ENST00000535997 LNP1A1A4G5 178 aa13.61□□□□□ -0.23
CHMP1A-202ENST00000535997 A6NLC8 198 aa13.61□□□□□ -0.23
CHMP1A-202ENST00000535997 TXNL1O43396 289 aa13.61□□□□□ -0.23
CHMP1A-202ENST00000535997 PSG2P11465 335 aa13.61□□□□□ -0.23
CHMP1A-202ENST00000535997 EPHA1P21709 976 aa13.61□□□□□ -0.23
CHMP1A-202ENST00000535997 RAB2AP61019 212 aa13.61□□□□□ -0.23
CHMP1A-202ENST00000535997 MDP1Q86V88 176 aa13.61□□□□□ -0.23
CHMP1A-202ENST00000535997 IL1F10Q8WWZ1 152 aa13.61□□□□□ -0.23
CHMP1A-202ENST00000535997 FER1L6-AS2Q96M78 137 aa13.61□□□□□ -0.23
CHMP1A-202ENST00000535997 PUS1Q9Y606 427 aaKnown RBP eCLIP13.61□□□□□ -0.23
CHMP1A-202ENST00000535997 A0A0G2JRQ6 117 aa13.61□□□□□ -0.23
CHMP1A-202ENST00000535997 UBE2CO00762 179 aa13.61□□□□□ -0.23
CHMP1A-202ENST00000535997 EIF3GO75821 320 aaKnown RBP eCLIP13.61□□□□□ -0.23
CHMP1A-202ENST00000535997 HBE1P02100 147 aa13.61□□□□□ -0.23
CHMP1A-202ENST00000535997 ARG1P05089 322 aa13.61□□□□□ -0.23
CHMP1A-202ENST00000535997 RTL8AQ9BWD3 113 aa13.61□□□□□ -0.23
CHMP1A-202ENST00000535997 OR51B6Q9H340 312 aa13.61□□□□□ -0.23
CHMP1A-202ENST00000535997 NXPH3O95157 252 aa13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 CNOT4O95628 575 aaKnown RBP13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 IFNA5P01569 189 aa13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 IGLV2-14P01704 120 aa13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 HSPB1P04792 205 aaKnown RBP13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 RUNX1Q01196 453 aa13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 TBC1D28Q2M2D7 210 aa13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 ZNF497Q6ZNH5 498 aa13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 IL17BQ9UHF5 180 aa13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 POLDIP2Q9Y2S7 368 aa13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 TRAV1-1A0A0B4J248 108 aa13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 MT-CO3P00414 261 aa13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 S100A8P05109 93 aa13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 SRP19P09132 144 aaKnown RBP13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 CD46P15529 392 aa13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 ZNF14P17017 642 aaPredicted RBP13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 ERVK11-1P61568 191 aa13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 S100A12P80511 92 aa13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 MRPL49Q13405 166 aaKnown RBP13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 TESK1Q15569 626 aa13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 Q6ZRM9 215 aa13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 WDYHV1Q96HA8 205 aa13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 OR1A1Q9P1Q5 309 aa13.6□□□□□ -0.23
CHMP1A-202ENST00000535997 A0A1W2PPE2 198 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 ARGFXA6NJG6 315 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 SLC33A1O00400 549 aaPredicted RBP13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 CD59P13987 128 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 CD200P41217 278 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 TGIF1Q15583 401 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 HAGHQ16775 308 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 ZNF506Q5JVG8 444 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 SPATA46Q5T0L3 261 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 ADAM5Q6NVV9 412 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 RNASE11Q8TAA1 199 aaKnown RBP13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 LIPGQ9Y5X9 500 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 MED12LQ86YW9 2145 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 H3BQ15 152 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 SYNGR2O43760 224 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 SCAF4O95104 1147 aaKnown RBP13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 OR2C1O95371 312 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 OR2H2O95918 312 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 SPINK2P20155 84 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 RPS23P62266 143 aaKnown RBP13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 THNSL2Q86YJ6 484 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 ZNF295-AS1Q8N0V1 137 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 SCCPDHQ8NBX0 429 aa13.59□□□□□ -0.23
CHMP1A-202ENST00000535997 DEFB127Q9H1M4 99 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms