RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 KCTD12Q96CX2 325 aaKnown RBP9.83□□□□□ -0.84
CHD4-203ENST00000535717 KIRREL1Q96J84 757 aa9.83□□□□□ -0.84
CHD4-203ENST00000535717 ZNF48Q96MX3 618 aaPredicted RBP9.83□□□□□ -0.84
CHD4-203ENST00000535717 HDHD3Q9BSH5 251 aaPredicted RBP9.83□□□□□ -0.84
CHD4-203ENST00000535717 SUCNR1Q9BXA5 334 aa9.83□□□□□ -0.84
CHD4-203ENST00000535717 TMEM133Q9H2Q1 129 aa9.83□□□□□ -0.84
CHD4-203ENST00000535717 ZMAT3Q9HA38 289 aaKnown RBP9.83□□□□□ -0.84
CHD4-203ENST00000535717 MBNL3Q9NUK0 354 aaKnown RBP9.83□□□□□ -0.84
CHD4-203ENST00000535717 IDI2-AS1Q9NZ38 188 aa9.83□□□□□ -0.84
CHD4-203ENST00000535717 A0A075B6Q4 140 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 IGHV2-26A0A0B4J1V2 119 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 A0A0U1RQK1 487 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 MDFIC2A0A1B0GVS7 189 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 FAM172BPA6NC97 362 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 MFNGO00587 321 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 NFYBP25208 207 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 SAA4P35542 130 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 ZNF846Q147U1 533 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 LTC4SQ16873 150 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 DEFB112Q30KQ8 113 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 CDNFQ49AH0 187 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 C6orf183Q5T699 404 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 OR52W1Q6IF63 320 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 ZNF880Q6PDB4 577 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 C5orf24Q7Z6I8 188 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 SIGLECL1Q8N7X8 197 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 SAMD12Q8N8I0 201 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 OR11H6Q8NGC7 330 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 S100ZQ8WXG8 99 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 AJUBAQ96IF1 538 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 RIMS4Q9H426 269 aaPredicted RBP9.82□□□□□ -0.84
CHD4-203ENST00000535717 TAF9BQ9HBM6 251 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 ZNF286AQ9HBT8 521 aa9.82□□□□□ -0.84
CHD4-203ENST00000535717 CHMP1AQ9HD42 196 aaPredicted RBP9.82□□□□□ -0.84
CHD4-203ENST00000535717 A0A087X0M5 115 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 TRBV6-6A0A0A6YYG2 114 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 A0A1B0GX30 115 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 MEIOCA2RUB1 952 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 ODF3BA8MYP8 253 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 SCGNO76038 276 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 IFNA2P01563 188 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 HBZP02008 142 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 ZNF182P17025 639 aaPredicted RBP9.81□□□□□ -0.84
CHD4-203ENST00000535717 CD34P28906 385 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 EIF2B2P49770 351 aaKnown RBP9.81□□□□□ -0.84
CHD4-203ENST00000535717 RIPPLY3P57055 190 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 MIDNQ504T8 468 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 UBE2NLQ5JXB2 153 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 ZNF626Q68DY1 528 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 C16orf87Q6PH81 154 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 TRAT1Q6PIZ9 186 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 ABHD12Q8N2K0 398 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 OR10A7Q8NGE5 316 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 OR1L1Q8NH94 360 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 SETD6Q8TBK2 473 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 ACOT12Q8WYK0 555 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 CMSS1Q9BQ75 279 aaKnown RBP9.81□□□□□ -0.84
CHD4-203ENST00000535717 CLEC7AQ9BXN2 247 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 ABCG5Q9H222 651 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 C12orf4Q9NQ89 552 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.81□□□□□ -0.84
CHD4-203ENST00000535717 KCNIP1Q9NZI2 227 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 COMMD3Q9UBI1 195 aa9.81□□□□□ -0.84
CHD4-203ENST00000535717 ELF5Q9UKW6 265 aaPredicted RBP9.81□□□□□ -0.84
CHD4-203ENST00000535717 SERPINE3A8MV23 424 aa9.8□□□□□ -0.84
CHD4-203ENST00000535717 F2RL2O00254 374 aa9.8□□□□□ -0.84
CHD4-203ENST00000535717 SPINT2O43291 252 aa9.8□□□□□ -0.84
CHD4-203ENST00000535717 IGHV3-7P01780 117 aa9.8□□□□□ -0.84
CHD4-203ENST00000535717 ARG1P05089 322 aa9.8□□□□□ -0.84
CHD4-203ENST00000535717 CD3GP09693 182 aa9.8□□□□□ -0.84
CHD4-203ENST00000535717 LOXL3P58215 753 aa9.8□□□□□ -0.84
CHD4-203ENST00000535717 HMGN3Q15651 99 aa9.8□□□□□ -0.84
CHD4-203ENST00000535717 LDLRAD2Q5SZI1 272 aa9.8□□□□□ -0.84
CHD4-203ENST00000535717 FAM53AQ6NSI3 398 aaPredicted RBP9.8□□□□□ -0.84
CHD4-203ENST00000535717 MOB1BQ7L9L4 216 aa9.8□□□□□ -0.84
CHD4-203ENST00000535717 LHFPL4Q7Z7J7 247 aa9.8□□□□□ -0.84
CHD4-203ENST00000535717 PRR18Q8N4B5 295 aa9.8□□□□□ -0.84
CHD4-203ENST00000535717 OR52M1Q8NGK5 317 aa9.8□□□□□ -0.84
CHD4-203ENST00000535717 DYNC2LI1Q8TCX1 351 aa9.8□□□□□ -0.84
CHD4-203ENST00000535717 ZNF418Q8TF45 676 aaPredicted RBP9.8□□□□□ -0.84
CHD4-203ENST00000535717 LEAP2Q969E1 77 aa9.8□□□□□ -0.84
CHD4-203ENST00000535717 PHF21AQ96BD5 680 aa9.8□□□□□ -0.84
CHD4-203ENST00000535717 PRDM13Q9H4Q3 707 aa9.8□□□□□ -0.84
CHD4-203ENST00000535717 Q9N2K0 584 aa9.8□□□□□ -0.84
CHD4-203ENST00000535717 FBN1P35555 2871 aaKnown RBP9.8□□□□□ -0.84
CHD4-203ENST00000535717 TRAV18A0A075B6X5 111 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 A0A0A6YYH2 397 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 IGHV3-43A0A0B4J1X8 118 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 TMEM235A6NFC5 223 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 A6NJ64 397 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 POM121CA8CG34 1229 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 SDCBPO00560 298 aaPredicted RBP9.79□□□□□ -0.84
CHD4-203ENST00000535717 HPGDSO60760 199 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 IGLV1-47P01700 117 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 EIF4EP06730 217 aaKnown RBP9.79□□□□□ -0.84
CHD4-203ENST00000535717 FCGR3AP08637 254 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 GSTP1P09211 210 aaKnown RBP9.79□□□□□ -0.84
CHD4-203ENST00000535717 IGHV3-43DP0DP04 118 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 LGALS4P56470 323 aa9.79□□□□□ -0.84
CHD4-203ENST00000535717 MRPS15P82914 257 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms