RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 GPR12P47775 334 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 SYT6Q5T7P8 510 aaPredicted RBP10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 C9orf66Q5T8R8 295 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 C10orf99Q6UWK7 81 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 ASCL4Q6XD76 172 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 LINC00311Q8N616 119 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 NKAIN3Q8N8D7 197 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 Q8NFD4 153 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 CYGBQ8WWM9 190 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 CST11Q9H112 138 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 ABCG5Q9H222 651 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 FAM53CQ9NYF3 392 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 KIAA1456Q9P272 454 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 LRRC42Q9Y546 428 aa10.48□□□□□ -0.73
CLSTN3-205ENST00000535452 IGHV3-43A0A0B4J1X8 118 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 H3BNX3 289 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 CRTAPO75718 401 aaPredicted RBP10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 LIMS3P0CW19 117 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 LIMS4P0CW20 117 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 IGHV3-43DP0DP04 118 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 CD40LGP29965 261 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 EGFEM1PQ0D2K5 195 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 FOXE3Q13461 319 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 STEAP3Q658P3 488 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 RAB12Q6IQ22 244 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 ZNF529Q6P280 563 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 GLIPR1L1Q6UWM5 242 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 RNF144BQ7Z419 303 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 RTN4IP1Q8WWV3 396 aaPredicted RBP10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 GHSRQ92847 366 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 ZNF251Q9BRH9 671 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 CHCHD6Q9BRQ6 235 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 SELENOIQ9C0D9 397 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 VCXQ9H320 206 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 OR2S2Q9NQN1 319 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 ABRACLQ9P1F3 81 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 DIMT1Q9UNQ2 313 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 PEX16Q9Y5Y5 336 aa10.47□□□□□ -0.73
CLSTN3-205ENST00000535452 NOTCH3Q9UM47 2321 aa10.46□□□□□ -0.73
CLSTN3-205ENST00000535452 CMYA5Q8N3K9 4069 aa10.46□□□□□ -0.73
CLSTN3-205ENST00000535452 MAS1P04201 325 aa10.46□□□□□ -0.73
CLSTN3-205ENST00000535452 NHLRC4P0CG21 123 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-205ENST00000535452 RANBP1P43487 201 aa10.46□□□□□ -0.73
CLSTN3-205ENST00000535452 EBI3Q14213 229 aa10.46□□□□□ -0.73
CLSTN3-205ENST00000535452 MMDQ15546 238 aa10.46□□□□□ -0.73
CLSTN3-205ENST00000535452 OR2G6Q5TZ20 316 aa10.46□□□□□ -0.73
CLSTN3-205ENST00000535452 ZNF497Q6ZNH5 498 aa10.46□□□□□ -0.73
CLSTN3-205ENST00000535452 LCNL1Q6ZST4 164 aa10.46□□□□□ -0.73
CLSTN3-205ENST00000535452 CDH26Q8IXH8 852 aa10.46□□□□□ -0.73
CLSTN3-205ENST00000535452 TFAP2CQ92754 450 aa10.46□□□□□ -0.73
CLSTN3-205ENST00000535452 MUL1Q969V5 352 aa10.46□□□□□ -0.73
CLSTN3-205ENST00000535452 WWC2-AS2Q96NR7 200 aa10.46□□□□□ -0.73
CLSTN3-205ENST00000535452 S1PR3Q99500 378 aa10.46□□□□□ -0.73
CLSTN3-205ENST00000535452 B9D2Q9BPU9 175 aa10.46□□□□□ -0.73
CLSTN3-205ENST00000535452 GHRLQ9UBU3 117 aa10.46□□□□□ -0.73
CLSTN3-205ENST00000535452 STEAP1Q9UHE8 339 aa10.46□□□□□ -0.73
CLSTN3-205ENST00000535452 ZNF107Q9UII5 783 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-205ENST00000535452 KIAA2026Q5HYC2 2103 aa10.46□□□□□ -0.74
CLSTN3-205ENST00000535452 WI2-2373I1.2A0A1W2PRP0 233 aa10.45□□□□□ -0.74
CLSTN3-205ENST00000535452 FAM90A10PA6NDY2 464 aa10.45□□□□□ -0.74
CLSTN3-205ENST00000535452 EFCAB10A6NFE3 127 aa10.45□□□□□ -0.74
CLSTN3-205ENST00000535452 FAM90A7PA6NKC0 464 aa10.45□□□□□ -0.74
CLSTN3-205ENST00000535452 FAM90A23PA8MXZ1 464 aa10.45□□□□□ -0.74
CLSTN3-205ENST00000535452 LY86O95711 162 aa10.45□□□□□ -0.74
CLSTN3-205ENST00000535452 MT-ND4P03905 459 aa10.45□□□□□ -0.74
CLSTN3-205ENST00000535452 GLAP06280 429 aa10.45□□□□□ -0.74
CLSTN3-205ENST00000535452 CDX1P47902 265 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-205ENST00000535452 ETV1P50549 477 aa10.45□□□□□ -0.74
CLSTN3-205ENST00000535452 DIAPH2-AS1Q14236 149 aa10.45□□□□□ -0.74
CLSTN3-205ENST00000535452 PLGLAQ15195 96 aa10.45□□□□□ -0.74
CLSTN3-205ENST00000535452 SLC25A48Q6ZT89 311 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-205ENST00000535452 ZNF554Q86TJ5 538 aa10.45□□□□□ -0.74
CLSTN3-205ENST00000535452 OR10V1Q8NGI7 309 aa10.45□□□□□ -0.74
CLSTN3-205ENST00000535452 OR4K15Q8NH41 348 aa10.45□□□□□ -0.74
CLSTN3-205ENST00000535452 UBALD1Q8TB05 177 aa10.45□□□□□ -0.74
CLSTN3-205ENST00000535452 NEDD4LQ96PU5 975 aa10.45□□□□□ -0.74
CLSTN3-205ENST00000535452 DCLRE1BQ9H816 532 aa10.45□□□□□ -0.74
CLSTN3-205ENST00000535452 ERICH4A6NGS2 130 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 SEC14L6B5MCN3 397 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 OGG1O15527 345 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 HBZP02008 142 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 RPLP1P05386 114 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 OR8U8P0C7N1 319 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 UBBP0CG47 229 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 MGMTP16455 207 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 FSTP19883 344 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 FUT3P21217 361 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 MYF6P23409 242 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 ECI1P42126 302 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 KRTAP10-11P60412 298 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 DOC2BQ14184 412 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 KIR2DS1Q14954 304 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 NKAPLQ5M9Q1 402 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 FAM27D1Q5T7N8 215 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 DHRSXQ8N5I4 330 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 OR2AK2Q8NG84 335 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 APH1BQ8WW43 257 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 GALMQ96C23 342 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 P2RX4Q99571 388 aa10.44□□□□□ -0.74
CLSTN3-205ENST00000535452 SLC29A1Q99808 456 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms