RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 RFPL4AL1F8VTS6 287 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 FGF16O43320 207 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 IGHA1P01876 353 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 TFF1P04155 84 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 MELTFP08582 738 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 AMY2BP19961 511 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 MDKP21741 143 aaPredicted RBP7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 GLRA1P23415 457 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 RBP2P50120 134 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 MFGE8Q08431 387 aaPredicted RBP7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 LRRC10Q5BKY1 277 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 DMRTC1Q5HYR2 192 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 IDNKQ5T6J7 187 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 STUMQ69YW2 141 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 DEGS2Q6QHC5 323 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 SHISA2Q6UWI4 295 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 Q6YL49 198 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 VMO1Q7Z5L0 202 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 BCDIN3DQ7Z5W3 292 aaKnown RBP7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 C1QL4Q86Z23 238 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 SLC35F2Q8IXU6 374 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 ZNF679Q8IYX0 411 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 KCNRGQ8N5I3 272 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 TCEANCQ8N8B7 351 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 OR51E1Q8TCB6 317 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 RXFP4Q8TDU9 374 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 ASB17Q8WXJ9 295 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 H1FXQ92522 213 aaKnown RBP7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 ARL11Q969Q4 196 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 RNFT2Q96EX2 444 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 IL4I1Q96RQ9 567 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 ABHD1Q96SE0 405 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 CMSS1Q9BQ75 279 aaKnown RBP7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 PBOV1Q9GZY1 135 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 PRDM13Q9H4Q3 707 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 NOX4Q9NPH5 578 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 GPR84Q9NQS5 396 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 HAO2Q9NYQ3 351 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 H2AFY2Q9P0M6 372 aaPredicted RBP7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 GTF2A1LQ9UNN4 478 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 EXOGQ9Y2C4 368 aaKnown RBP7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 KPTNQ9Y664 436 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 POMT1Q9Y6A1 747 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 TMEM14AQ9Y6G1 99 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 TRAV1-2A0A0B4J238 106 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 A0A0U1RQV5 110 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 RNF222A6NCQ9 220 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 FAM181BA6NEQ2 426 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 GPR37O15354 613 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 MAGEB4O15481 346 aaPredicted RBP7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 RHBDL1O75783 438 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 EIF4EP06730 217 aaKnown RBP7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 LIMS3P0CW19 117 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 LIMS4P0CW20 117 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 SLC25A4P12235 298 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 FAHP16930 419 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 NDUFB7P17568 137 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 DCTDP32321 178 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 GABRA2P47869 451 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 TAS2R43P59537 309 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 SNRPEP62304 92 aaKnown RBP7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 GNG3P63215 75 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 PRB3Q04118 309 aaPredicted RBP7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 PDZK1IP1Q13113 114 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 FAM74A1Q5RGS3 127 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 PLCXD3Q63HM9 321 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 LPCAT3Q6P1A2 487 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 ZNF322Q6U7Q0 402 aaPredicted RBP7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 MEPCEQ7L2J0 689 aaKnown RBP7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 CMTM4Q8IZR5 234 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 SAMD12Q8N8I0 201 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 LY6G5BQ8NDX9 201 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 TMEM185AQ8NFB2 350 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 PHYHIPQ92561 330 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 TMEM203Q969S6 136 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 PPP1R14AQ96A00 147 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 GAFA1Q96PS6 74 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 GINS4Q9BRT9 223 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 DCTN5Q9BTE1 182 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 CHIAQ9BZP6 476 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 SIRT7Q9NRC8 400 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 INPP5EQ9NRR6 644 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 C19orf12Q9NSK7 152 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 GHRLQ9UBU3 117 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 SLC25A10Q9UBX3 287 aaPredicted RBP7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 PIGLQ9Y2B2 252 aa7.03□□□□□ -1.28
SFSWAP-202ENST00000535202 A0A0U1RQK1 487 aa7.02□□□□□ -1.29
SFSWAP-202ENST00000535202 A0A1W2PRD5 423 aa7.02□□□□□ -1.29
SFSWAP-202ENST00000535202 A0A1W2PRF3 423 aa7.02□□□□□ -1.29
SFSWAP-202ENST00000535202 A0A1W2PRM7 423 aa7.02□□□□□ -1.29
SFSWAP-202ENST00000535202 SLC22A31A6NKX4 558 aa7.02□□□□□ -1.29
SFSWAP-202ENST00000535202 OR5B21A6NL26 309 aa7.02□□□□□ -1.29
SFSWAP-202ENST00000535202 OR2AT4A6NND4 320 aa7.02□□□□□ -1.29
SFSWAP-202ENST00000535202 POM121CA8CG34 1229 aa7.02□□□□□ -1.29
SFSWAP-202ENST00000535202 GABARAPH6UMI1 98 aa7.02□□□□□ -1.29
SFSWAP-202ENST00000535202 AP4M1O00189 453 aa7.02□□□□□ -1.29
SFSWAP-202ENST00000535202 GPR31O00270 319 aa7.02□□□□□ -1.29
SFSWAP-202ENST00000535202 BCL2L11O43521 198 aa7.02□□□□□ -1.29
SFSWAP-202ENST00000535202 CRTAPO75718 401 aaPredicted RBP7.02□□□□□ -1.29
SFSWAP-202ENST00000535202 RBBP9O75884 186 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms