RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 SPTBN5Q9NRC6 3674 aaKnown RBP13.67□□□□□ -0.22
MCF2L-232ENST00000535094 ABCA1O95477 2261 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 SYNGR1O43759 233 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 DEFA4P12838 97 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 HIST1H1BP16401 226 aaKnown RBP13.67□□□□□ -0.22
MCF2L-232ENST00000535094 PKIAP61925 76 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 IL24Q13007 206 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 C16orf82Q7Z2V1 217 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 ZNF318Q5VUA4 2279 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 LTBP2Q14767 1821 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 SYNGR2O43760 224 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 CCL4P13236 92 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 ARF1P84077 181 aaKnown RBP13.67□□□□□ -0.22
MCF2L-232ENST00000535094 TMEM241Q24JQ0 296 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 NUP210LQ5VU65 1888 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 TMEM211Q6ICI0 200 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 FIP1L1Q6UN15 594 aaKnown RBP13.67□□□□□ -0.22
MCF2L-232ENST00000535094 CLDN23Q96B33 292 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 C14orf144Q96I85 54 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 OR2H1Q9GZK4 316 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 PISDQ9UG56 409 aa13.67□□□□□ -0.22
MCF2L-232ENST00000535094 ANKRD30BLA7E2S9 258 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 DEGS1O15121 323 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 FGF7P21781 194 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 PTGDSP41222 190 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-232ENST00000535094 HIST3H2BBQ8N257 126 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 PRSS50Q9UI38 385 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 CHCHD2Q9Y6H1 151 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-232ENST00000535094 FAM166BA8MTA8 275 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 PPIHO43447 177 aaKnown RBP13.66□□□□□ -0.22
MCF2L-232ENST00000535094 CRYAAP02489 173 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 FOSL1P15407 271 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 PAX6P26367 422 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 BSXQ3C1V8 233 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 ZDHHC23Q8IYP9 409 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 TMEM204Q9BSN7 226 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 SIRT7Q9NRC8 400 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 PDGFBP01127 241 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-232ENST00000535094 SERPINA7P05543 415 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 CD55P08174 381 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 LIFP15018 202 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 IL2RGP31785 369 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 FAM3BP58499 235 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-232ENST00000535094 RAC1P63000 192 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 PLGLB1Q02325 96 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 TGFBR3Q03167 851 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 SLC35E3Q7Z769 313 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 ABHD5Q8WTS1 349 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 TWSG1Q9GZX9 223 aa13.66□□□□□ -0.22
MCF2L-232ENST00000535094 PTPRSQ13332 1948 aa13.65□□□□□ -0.22
MCF2L-232ENST00000535094 EML6Q6ZMW3 1958 aa13.65□□□□□ -0.22
MCF2L-232ENST00000535094 IFITM10A6NMD0 228 aa13.65□□□□□ -0.22
MCF2L-232ENST00000535094 CBR3O75828 277 aa13.65□□□□□ -0.22
MCF2L-232ENST00000535094 GRPP07492 148 aa13.65□□□□□ -0.22
MCF2L-232ENST00000535094 LTBRP36941 435 aa13.65□□□□□ -0.22
MCF2L-232ENST00000535094 TGIF2LXQ8IUE1 241 aa13.65□□□□□ -0.22
MCF2L-232ENST00000535094 NABP1Q96AH0 204 aa13.65□□□□□ -0.22
MCF2L-232ENST00000535094 RPL36A-HNRNPH2H7BZ11 118 aa13.65□□□□□ -0.22
MCF2L-232ENST00000535094 PGLYRP1O75594 196 aaPredicted RBP13.65□□□□□ -0.22
MCF2L-232ENST00000535094 RPL29P47914 159 aaKnown RBP13.65□□□□□ -0.22
MCF2L-232ENST00000535094 EIF3IQ13347 325 aaKnown RBP13.65□□□□□ -0.22
MCF2L-232ENST00000535094 TMEM41BQ5BJD5 291 aa13.65□□□□□ -0.22
MCF2L-232ENST00000535094 ZNF506Q5JVG8 444 aa13.65□□□□□ -0.22
MCF2L-232ENST00000535094 HINT2Q9BX68 163 aa13.65□□□□□ -0.22
MCF2L-232ENST00000535094 OR51I2Q9H344 312 aa13.65□□□□□ -0.22
MCF2L-232ENST00000535094 ZNF320A2RRD8 509 aa13.65□□□□□ -0.23
MCF2L-232ENST00000535094 F2RP25116 425 aa13.65□□□□□ -0.23
MCF2L-232ENST00000535094 MDH2P40926 338 aaKnown RBP13.65□□□□□ -0.23
MCF2L-232ENST00000535094 CXCL12P48061 93 aa13.65□□□□□ -0.23
MCF2L-232ENST00000535094 KMT5CQ86Y97 462 aa13.65□□□□□ -0.23
MCF2L-232ENST00000535094 SMRP1Q8NCR6 262 aa13.65□□□□□ -0.23
MCF2L-232ENST00000535094 ELOA3CA0A087WX78 387 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-232ENST00000535094 A0A1W2PQM1 296 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 TCAPO15273 167 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 CA6P23280 308 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 SLC38A11Q08AI6 406 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 RCC1LQ96I51 464 aaKnown RBP13.64□□□□□ -0.23
MCF2L-232ENST00000535094 OR4C12Q96R67 309 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 MSL2Q9HCI7 577 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 OR1A1Q9P1Q5 309 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 CADP27708 2225 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 A0A0G2JMM0 328 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 IGHV5-10-1A0A0J9YXX1 117 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 A0A1W2PPB8 328 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 A0A1W2PRS3 328 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 KIR3DP1A8MWS1 328 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 NGFP01138 241 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 OPN1MWP04001 364 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 OPN1MW2P0DN77 364 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 OPN1MW3P0DN78 364 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 FOLR3P41439 243 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 CXorf67Q86X51 503 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-232ENST00000535094 LYPD6BQ8NI32 183 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 PITPNC1Q9UKF7 332 aa13.64□□□□□ -0.23
MCF2L-232ENST00000535094 CYB5R3P00387 301 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-232ENST00000535094 OR8G1Q15617 311 aa13.63□□□□□ -0.23
MCF2L-232ENST00000535094 KCNMB1Q16558 191 aa13.63□□□□□ -0.23
MCF2L-232ENST00000535094 NINJ1Q92982 152 aa13.63□□□□□ -0.23
MCF2L-232ENST00000535094 HIST1H2BLQ99880 126 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms