RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 ZNF816Q0VGE8 651 aaPredicted RBP11.17□□□□□ -0.62
SF3B2-215ENST00000534307 GPR50Q13585 617 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 NSUN5P1Q3KNT7 163 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 Q3ZCU0 254 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 ARSJQ5FYB0 599 aaPredicted RBP11.17□□□□□ -0.62
SF3B2-215ENST00000534307 KPRPQ5T749 579 aaPredicted RBP11.17□□□□□ -0.62
SF3B2-215ENST00000534307 OR5AU1Q8NGC0 362 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 OR10X1Q8NGY0 326 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 UBALD1Q8TB05 177 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 NEK7Q8TDX7 302 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 CAPSLQ8WWF8 208 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 PHYHIPQ92561 330 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 ST6GALNAC6Q969X2 333 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 ANKRD60Q9BZ19 345 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 SELENOIQ9C0D9 397 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 DUSP21Q9H596 190 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 ETAA1Q9NY74 926 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 GHRLQ9UBU3 117 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 MOB4Q9Y3A3 225 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 PEX16Q9Y5Y5 336 aa11.17□□□□□ -0.62
SF3B2-215ENST00000534307 G3V4G9 280 aa11.16□□□□□ -0.62
SF3B2-215ENST00000534307 SDCBPO00560 298 aaPredicted RBP11.16□□□□□ -0.62
SF3B2-215ENST00000534307 HSD17B6O14756 317 aa11.16□□□□□ -0.62
SF3B2-215ENST00000534307 CA11O75493 328 aa11.16□□□□□ -0.62
SF3B2-215ENST00000534307 CRTAPO75718 401 aaPredicted RBP11.16□□□□□ -0.62
SF3B2-215ENST00000534307 FUT3P21217 361 aa11.16□□□□□ -0.62
SF3B2-215ENST00000534307 EBI3Q14213 229 aa11.16□□□□□ -0.62
SF3B2-215ENST00000534307 BEAN1Q3B7T3 259 aa11.16□□□□□ -0.62
SF3B2-215ENST00000534307 C1orf100Q5SVJ3 147 aa11.16□□□□□ -0.62
SF3B2-215ENST00000534307 SYT6Q5T7P8 510 aaPredicted RBP11.16□□□□□ -0.62
SF3B2-215ENST00000534307 SAMD5Q5TGI4 173 aa11.16□□□□□ -0.62
SF3B2-215ENST00000534307 IZUMO2Q6UXV1 221 aa11.16□□□□□ -0.62
SF3B2-215ENST00000534307 C5orf56Q8N8D9 126 aa11.16□□□□□ -0.62
SF3B2-215ENST00000534307 ZNF439Q8NDP4 499 aa11.16□□□□□ -0.62
SF3B2-215ENST00000534307 FAM46BQ96A09 425 aa11.16□□□□□ -0.62
SF3B2-215ENST00000534307 TMED9Q9BVK6 235 aa11.16□□□□□ -0.62
SF3B2-215ENST00000534307 MBNL3Q9NUK0 354 aaKnown RBP11.16□□□□□ -0.62
SF3B2-215ENST00000534307 SCN3BQ9NY72 215 aa11.16□□□□□ -0.62
SF3B2-215ENST00000534307 NOTCH3Q9UM47 2321 aa11.16□□□□□ -0.62
SF3B2-215ENST00000534307 IGHV3-43A0A0B4J1X8 118 aa11.15□□□□□ -0.62
SF3B2-215ENST00000534307 IGHV1-3A0A0C4DH29 117 aa11.15□□□□□ -0.62
SF3B2-215ENST00000534307 CCRL2O00421 344 aa11.15□□□□□ -0.62
SF3B2-215ENST00000534307 SLC31A2O15432 143 aa11.15□□□□□ -0.62
SF3B2-215ENST00000534307 PDCD6O75340 191 aa11.15□□□□□ -0.62
SF3B2-215ENST00000534307 UCHL1P09936 223 aa11.15□□□□□ -0.62
SF3B2-215ENST00000534307 IGHV3-43DP0DP04 118 aa11.15□□□□□ -0.62
SF3B2-215ENST00000534307 VSIG8P0DPA2 414 aa11.15□□□□□ -0.62
SF3B2-215ENST00000534307 RCC1P18754 421 aaPredicted RBP11.15□□□□□ -0.62
SF3B2-215ENST00000534307 ZNF137PP52743 207 aa11.15□□□□□ -0.62
SF3B2-215ENST00000534307 QRFPP83859 136 aa11.15□□□□□ -0.62
SF3B2-215ENST00000534307 TMEM30BQ3MIR4 351 aa11.15□□□□□ -0.62
SF3B2-215ENST00000534307 C10orf99Q6UWK7 81 aa11.15□□□□□ -0.62
SF3B2-215ENST00000534307 SLC25A48Q6ZT89 311 aaKnown RBP11.15□□□□□ -0.62
SF3B2-215ENST00000534307 IZUMO1Q8IYV9 350 aa11.15□□□□□ -0.62
SF3B2-215ENST00000534307 Q8N6K4 173 aa11.15□□□□□ -0.62
SF3B2-215ENST00000534307 OR4K15Q8NH41 348 aa11.15□□□□□ -0.62
SF3B2-215ENST00000534307 TRAPPC2LQ9UL33 140 aa11.15□□□□□ -0.62
SF3B2-215ENST00000534307 SLC22A1O15245 554 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 SPINT2O43291 252 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 FGF16O43320 207 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 IGKV1D-33P01593 117 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 IGKV1-33P01594 117 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 HBZP02008 142 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 GAPDHP04406 335 aaKnown RBP11.14□□□□□ -0.63
SF3B2-215ENST00000534307 UBBP0CG47 229 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 TMEM11P17152 192 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 SRMP19623 302 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 CRHBPP24387 322 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 REG1BP48304 166 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 ZNF134P52741 427 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 TPBGQ13641 420 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 MED22Q15528 200 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 RBM48Q5RL73 367 aaKnown RBP11.14□□□□□ -0.63
SF3B2-215ENST00000534307 C6orf183Q5T699 404 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 LIPKQ5VXJ0 399 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 OR10K2Q6IF99 312 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 TRAT1Q6PIZ9 186 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 TMEM91Q6ZNR0 172 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 CEACAM19Q7Z692 300 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 CENPVQ7Z7K6 275 aaPredicted RBP11.14□□□□□ -0.63
SF3B2-215ENST00000534307 ZNF554Q86TJ5 538 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 OR4F17Q8NGA8 305 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 OR1L1Q8NH94 360 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 MRPL30Q8TCC3 161 aaKnown RBP11.14□□□□□ -0.63
SF3B2-215ENST00000534307 RTN4IP1Q8WWV3 396 aaPredicted RBP11.14□□□□□ -0.63
SF3B2-215ENST00000534307 R3HDM4Q96D70 268 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 OR4F4Q96R69 305 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 CST11Q9H112 138 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 ISYNA1Q9NPH2 558 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 TPRKBQ9Y3C4 175 aa11.14□□□□□ -0.63
SF3B2-215ENST00000534307 UBE2QL1A1L167 161 aa11.13□□□□□ -0.63
SF3B2-215ENST00000534307 RRP9O43818 475 aaKnown RBP11.13□□□□□ -0.63
SF3B2-215ENST00000534307 MPIG6BO95866 241 aa11.13□□□□□ -0.63
SF3B2-215ENST00000534307 CHATP28329 748 aa11.13□□□□□ -0.63
SF3B2-215ENST00000534307 HSPA13P48723 471 aa11.13□□□□□ -0.63
SF3B2-215ENST00000534307 RPS27AP62979 156 aaKnown RBP11.13□□□□□ -0.63
SF3B2-215ENST00000534307 UNC119Q13432 240 aa11.13□□□□□ -0.63
SF3B2-215ENST00000534307 HES1Q14469 280 aa11.13□□□□□ -0.63
SF3B2-215ENST00000534307 HSD17B12Q53GQ0 312 aa11.13□□□□□ -0.63
SF3B2-215ENST00000534307 CT45A1Q5HYN5 189 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms